http://lod.bco-dmo.org/id/dataset/874099
eng; USA
utf8
dataset
Highest level of data collection, from a common set of sensors or instrumentation, usually within the same research project
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
2022-05-09
ISO 19115-2 Geographic Information - Metadata - Part 2: Extensions for Imagery and Gridded Data
ISO 19115-2:2009(E)
Event log from RVIB Nathaniel B. Palmer cruise NBP1801 in the Southern Ocean for the CICLOPS project
2022-05-09
publication
2022-05-09
revision
BCO-DMO Linked Data URI
2022-05-09
creation
http://lod.bco-dmo.org/id/dataset/874099
Mak A. Saito
Woods Hole Oceanographic Institution
principalInvestigator
Giacomo DiTullio
College of Charleston - Hollings Marine Lab
principalInvestigator
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
publisher
Cite this dataset as: Saito, M. A., DiTullio, G. (2022) Event log from RVIB Nathaniel B. Palmer cruise NBP1801 in the Southern Ocean for the CICLOPS project. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2022-05-09 [if applicable, indicate subset used]. http://lod.bco-dmo.org/id/dataset/874099 [access date]
Dataset Description: <p>Event log of instrument deployments and significant events from NBP1801 cruise from December 16th, 2017 to March 3rd, 2018.&nbsp;&nbsp;</p> Methods and Sampling: <p>During the Nathaniel B. Palmer cruise (NBP1801) from December 16th, 2017 to March 3rd, 2018 various sampling devices were employed including CTDs, gliders, plankton tows, McLane pumps, IKM trawls, and net tows.&nbsp;&nbsp;</p>
<p>This event log provides a chronological record of scientific sampling events and deployments.&nbsp; It can help integrate observations from the myriad of instruments and delineate the relative timing between events.&nbsp;&nbsp;</p>
<p><u>Problem report:&nbsp;</u><br />
Multiple users contributed information to the event log, so there are a few instances of incomplete data, typically on unusual deployments.&nbsp; For example, there are some blanks due to lack of log data during sediment trap recovery and trawl deployments.&nbsp;</p>
Funding provided by NSF Office of Polar Programs (formerly NSF PLR) (NSF OPP) Award Number: OPP-1644073 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=1644073
Funding provided by NSF Office of Polar Programs (formerly NSF PLR) (NSF OPP) Award Number: OPP-1643684 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=1643684
Funding provided by NSF Office of Polar Programs (formerly NSF PLR) (NSF OPP) Award Number: OPP-1643845 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=1643845
onGoing
Mak A. Saito
Woods Hole Oceanographic Institution
508-289-2393
266 Woods Hole Rd. MS #51 Watson Lab
Woods Hole
MA
02543
USA
msaito@whoi.edu
pointOfContact
Giacomo DiTullio
College of Charleston - Hollings Marine Lab
843-953-9196
Hollings Marine Lab 205 Fort Johnson Rd.
Charleston
SC
29412
USA
ditullioj@cofc.edu
pointOfContact
asNeeded
Dataset Version: 1
Unknown
Event_Num
Event_Name
Event_Type
Station
Operator
Start_Date_UTC
Start_Time_UTC
Latitude
Longitude
Notes
bucket sample
Drifter
IKM Trawl
Plankton Tow
PRR
Sediment Trap
TMR
theme
None, User defined
No BCO-DMO term
featureType
BCO-DMO Standard Parameters
bucket
CTD Sea-Bird SBE 911plus
Drifter Buoy
Isaacs-Kidd Midwater Trawl
McLane Pump
Plankton Net
Radiometer
Sediment Trap
Trace Metal Bottle
instrument
BCO-DMO Standard Instruments
NBP1801
service
Deployment Activity
Western Ross Sea, Southern Ocean
place
Locations
otherRestrictions
otherRestrictions
Access Constraints: none. Use Constraints: Please follow guidelines at: http://www.bco-dmo.org/terms-use Distribution liability: Under no circumstances shall BCO-DMO be liable for any direct, incidental, special, consequential, indirect, or punitive damages that result from the use of, or the inability to use, the materials in this data submission. If you are dissatisfied with any materials in this data submission your sole and exclusive remedy is to discontinue use.
Collaborative Research: Cobalamin and Iron Co-Limitation Of Phytoplankton Species in Terra Nova Bay
https://osprey.bco-dmo.org/project/774945
Collaborative Research: Cobalamin and Iron Co-Limitation Of Phytoplankton Species in Terra Nova Bay
<p>NSF abstract:<br />
Phytoplankton blooms in the coastal waters of the Ross Sea, Antarctica are typically dominated by either diatoms or Phaeocystis Antarctica (a flagellated algae that often can form large colonies in a gelatinous matrix). The project seeks to determine if an association of bacterial populations with Phaeocystis antarctica colonies can directly supply Phaeocystis with Vitamin B12, which can be an important co-limiting micronutrient in the Ross Sea. The supply of an essential vitamin coupled with the ability to grow at lower iron concentrations may put Phaeocystis at a competitive advantage over diatoms. Because Phaeocystis cells can fix more carbon than diatoms and Phaeocystis are not grazed as efficiently as diatoms, the project will help in refining understanding of carbon dynamics in the region as well as the basis of the food web webs. Such understanding also has the potential to help refine predictive ecological models for the region. The project will conduct public outreach activities and will contribute to undergraduate and graduate research. Engagement of underrepresented students will occur during summer student internships. A collaboration with Italian Antarctic researchers, who have been studying the Terra Nova Bay ecosystem since the 1980s, aims to enhance the project and promote international scientific collaborations.</p>
<p>The study will test whether a mutualistic symbioses between attached bacteria and Phaeocystis provides colonial cells a mechanism for alleviating chronic Vitamin B12 co-limitation effects thereby conferring them with a competitive advantage over diatom communities. The use of drifters in a time series study will provide the opportunity to track in both space and time a developing algal bloom in Terra Nova Bay and to determine community structure and the physiological nutrient status of microbial populations. A combination of flow cytometry, proteomics, metatranscriptomics, radioisotopic and stable isotopic labeling experiments will determine carbon and nutrient uptake rates and the role of bacteria in mitigating potential vitamin B12 and iron limitation. Membrane inlet and proton transfer reaction mass spectrometry will also be used to estimate net community production and release of volatile organic carbon compounds that are climatically active. Understanding how environmental parameters can influence microbial community dynamics in Antarctic coastal waters will advance an understanding of how changes in ocean stratification and chemistry could impact the biogeochemistry and food web dynamics of Southern Ocean ecosystems.</p>
CICLOPS
largerWorkCitation
project
eng; USA
oceans
Western Ross Sea, Southern Ocean
-179.995
-87.2799
-78.6297
-64.7219
2017-12-26
2018-02-19
Amundsen Sea, Ross Sea, Terra Nova Bay
0
BCO-DMO catalogue of parameters from Event log from RVIB Nathaniel B. Palmer cruise NBP1801 in the Southern Ocean for the CICLOPS project
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
http://lod.bco-dmo.org/id/dataset-parameter/874764.rdf
Name: Event_Num
Units: unitless
Description: <p>Number of sampling event</p>
http://lod.bco-dmo.org/id/dataset-parameter/874765.rdf
Name: Event_Name
Units: unitless
Description: <p>Name of Sampling event</p>
http://lod.bco-dmo.org/id/dataset-parameter/874766.rdf
Name: Event_Type
Units: unitless
Description: <p>Type of sampling event</p>
http://lod.bco-dmo.org/id/dataset-parameter/874767.rdf
Name: Station
Units: unitless
Description: <p>Station</p>
http://lod.bco-dmo.org/id/dataset-parameter/874768.rdf
Name: Operator
Units: unitless
Description: <p>Operator</p>
http://lod.bco-dmo.org/id/dataset-parameter/874769.rdf
Name: Start_Date_UTC
Units: unitless
Description: <p>Start date of sampling event in UTC</p>
http://lod.bco-dmo.org/id/dataset-parameter/874770.rdf
Name: Start_Time_UTC
Units: unitless
Description: <p>Start time of sampling event</p>
http://lod.bco-dmo.org/id/dataset-parameter/874771.rdf
Name: Latitude
Units: decimal degrees
Description: <p>Latitude of sampling</p>
http://lod.bco-dmo.org/id/dataset-parameter/874772.rdf
Name: Longitude
Units: decimal degrees
Description: <p>Longitude of sampling</p>
http://lod.bco-dmo.org/id/dataset-parameter/874773.rdf
Name: Notes
Units: unitless
Description: <p>Notes</p>
GB/NERC/BODC > British Oceanographic Data Centre, Natural Environment Research Council, United Kingdom
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
15740
https://datadocs.bco-dmo.org/file/YVVZwYBUp7joGx/ciclops_event_log.csv
ciclops_event_log.csv
Primary data file for dataset ID 874099
download
5222509
https://datadocs.bco-dmo.org/docs/305/CICLOPS/data_docs/NBP1801_Data_Report.pdf
NBP1801 Science Data Report
Science data report from Nathaniel B. Palmer cruise NBP1801
download
https://osprey.bco-dmo.org/dataset/874099/data/download
download
onLine
dataset
<p>During the Nathaniel B. Palmer cruise (NBP1801) from December 16th, 2017 to March 3rd, 2018 various sampling devices were employed including CTDs, gliders, plankton tows, McLane pumps, IKM trawls, and net tows.&nbsp;&nbsp;</p>
<p>This event log provides a chronological record of scientific sampling events and deployments.&nbsp; It can help integrate observations from the myriad of instruments and delineate the relative timing between events.&nbsp;&nbsp;</p>
<p><u>Problem report:&nbsp;</u><br />
Multiple users contributed information to the event log, so there are a few instances of incomplete data, typically on unusual deployments.&nbsp; For example, there are some blanks due to lack of log data during sediment trap recovery and trawl deployments.&nbsp;</p>
Specified by the Principal Investigator(s)
<p><u><strong>BCO-DMO processing</strong></u><br />
- converted latitude and longitude to decimal degrees (from degrees, decimal mins)<br />
- converted Date to YMD format<br />
-&nbsp;added conventional header with dataset name, PI name, version date<br />
-&nbsp;modified parameter names to conform with BCO-DMO naming conventions<br />
&nbsp;</p>
Specified by the Principal Investigator(s)
asNeeded
7.x-1.1
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
bucket sample
bucket sample
PI Supplied Instrument Name: bucket sample Instrument Name: bucket Instrument Short Name:bucket Instrument Description: A bucket used to collect surface sea water samples. Community Standard Description: http://vocab.nerc.ac.uk/collection/L22/current/TOOL0536/
PI Supplied Instrument Name: Instrument Name: CTD Sea-Bird SBE 911plus Instrument Short Name:CTD SBE 911plus Instrument Description: The Sea-Bird SBE 911 plus is a type of CTD instrument package for continuous measurement of conductivity, temperature and pressure. The SBE 911 plus includes the SBE 9plus Underwater Unit and the SBE 11plus Deck Unit (for real-time readout using conductive wire) for deployment from a vessel. The combination of the SBE 9 plus and SBE 11 plus is called a SBE 911 plus. The SBE 9 plus uses Sea-Bird's standard modular temperature and conductivity sensors (SBE 3 plus and SBE 4). The SBE 9 plus CTD can be configured with up to eight auxiliary sensors to measure other parameters including dissolved oxygen, pH, turbidity, fluorescence, light (PAR), light transmission, etc.). more information from Sea-Bird Electronics Community Standard Description: http://vocab.nerc.ac.uk/collection/L22/current/TOOL0058/
Drifter
Drifter
PI Supplied Instrument Name: Drifter Instrument Name: Drifter Buoy Instrument Short Name: Instrument Description: Drifting buoys are free drifting platforms with a float or buoy that keep the drifter at the surface and underwater sails or socks that catch the current. These instruments sit at the surface of the ocean and are transported via near-surface ocean currents. They are not fixed to the ocean bottom, therefore they "drift" with the currents. For this reason, these instruments are referred to as drifters, or drifting buoys.
The surface float contains sensors that measure different parameters, such as sea surface temperature, barometric pressure, salinity, wave height, etc. Data collected from these sensors are transmitted to satellites passing overhead, which are then relayed to land-based data centers.
definition sources: https://mmisw.org/ont/ioos/platform/drifting_buoy and https://www.aoml.noaa.gov/phod/gdp/faq.php#drifter1
IKM Trawl
IKM Trawl
PI Supplied Instrument Name: IKM Trawl Instrument Name: Isaacs-Kidd Midwater Trawl Instrument Short Name:IKMT Instrument Description: A trawl with a pentagonal mouth opening and a dihedral depressor vane as part of the mouth opening. IKMTs come in various dimensions (refer to individual dataset documentation).
The original IKMTs were 10 foot (304 cm) and 15 foot (457 cm) at the mouth. The 10 foot IKMT net was 31 feet (9.45 m) in length (Wiebe and Benfield 2003). Community Standard Description: http://vocab.nerc.ac.uk/collection/L22/current/NETT0071/
PI Supplied Instrument Name: Instrument Name: McLane Pump Instrument Short Name:McLane Pump Instrument Description: McLane pumps sample large volumes of seawater at depth. They are attached to a wire and lowered to different depths in the ocean. As the water is pumped through the filter, particles suspended in the ocean are collected on the filters. The pumps are then retrieved and the contents of the filters are analyzed in a lab.
Plankton Tow
Plankton Tow
PI Supplied Instrument Name: Plankton Tow Instrument Name: Plankton Net Instrument Short Name:Plankton Net Instrument Description: A Plankton Net is a generic term for a sampling net that is used to collect plankton. It is used only when detailed instrument documentation is not available. Community Standard Description: http://vocab.nerc.ac.uk/collection/L05/current/22/
PRR
PRR
PI Supplied Instrument Name: PRR PI Supplied Instrument Description:PRR (Underwater): Biospherical Instruments PRR-800
PRR (Mast): Biospherical Instruments PRR-810 Instrument Name: Radiometer Instrument Short Name:Radiometer Instrument Description: Radiometer is a generic term for a range of instruments used to measure electromagnetic radiation (radiance and irradiance) in the atmosphere or the water column. For example, this instrument category includes free-fall spectral radiometer (SPMR/SMSR System, Satlantic, Inc), profiling or deck cosine PAR units (PUV-500 and 510, Biospherical Instruments, Inc). This is a generic term used when specific type, make and model were not specified. Community Standard Description: http://vocab.nerc.ac.uk/collection/L05/current/122/
Sediment Trap
Sediment Trap
PI Supplied Instrument Name: Sediment Trap Instrument Name: Sediment Trap Instrument Short Name:Sediment Trap Instrument Description: Sediment traps are specially designed containers deployed in the water column for periods of time to collect particles from the water column falling toward the sea floor. In general a sediment trap has a jar at the bottom to collect the sample and a broad funnel-shaped opening at the top with baffles to keep out very large objects and help prevent the funnel from clogging. This designation is used when the specific type of sediment trap was not specified by the contributing investigator. Community Standard Description: http://vocab.nerc.ac.uk/collection/L05/current/33/
TMR
TMR
PI Supplied Instrument Name: TMR Instrument Name: Trace Metal Bottle Instrument Short Name:TM Bottle Instrument Description: Trace metal (TM) clean rosette bottle used for collecting trace metal clean seawater samples. Community Standard Description: http://vocab.nerc.ac.uk/collection/L05/current/30/
Cruise: NBP1801
NBP1801
Community Standard Description
International Council for the Exploration of the Sea
RVIB Nathaniel B. Palmer
vessel
NBP1801
Giacomo DiTullio
College of Charleston
https://service.rvdata.us/data/cruise/NBP1801/doc/NBP1801DATA.pdf
Report describing NBP1801
Community Standard Description
International Council for the Exploration of the Sea
RVIB Nathaniel B. Palmer
vessel