http://lod.bco-dmo.org/id/dataset/874458
eng; USA
utf8
dataset
Highest level of data collection, from a common set of sensors or instrumentation, usually within the same research project
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
2022-05-17
ISO 19115-2 Geographic Information - Metadata - Part 2: Extensions for Imagery and Gridded Data
ISO 19115-2:2009(E)
Wild adult and recruit Kelletia kelletii samples from 2015 to 2017 (KW connectivity project)
2022-05-17
publication
2022-05-17
revision
Marine Biological Laboratory/Woods Hole Oceanographic Institution Library (MBLWHOI DLA)
2022-06-01
publication
https://doi.org/10.26008/1912/bco-dmo.874458.1
Crow White
Cal Poly San Luis Obispo
principalInvestigator
Mark Christie
Purdue University
principalInvestigator
Robert J. Toonen
Hawaii Institute of Marine Biology
principalInvestigator
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
publisher
Cite this dataset as: White, C., Christie, M., Toonen, R. J. (2022) Wild adult and recruit Kelletia kelletii samples from 2015 to 2017 (KW connectivity project). Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2022-05-17 [if applicable, indicate subset used]. doi:10.26008/1912/bco-dmo.874458.1 [access date]
Wild adult and recruit Kelletia kelletii samples 2015-17 Dataset Description: Methods and Sampling: <p><strong>Methodology:&nbsp;</strong></p>
<p>Samples (n=6900) were collected during the summer months (June, July, August) of each year (2015, 2016, 2017). Samples were collected by hand at sub-tidal reefs using SCUBA. Adult samples (n=4624) represent ~60-100 mg tissue removed from the foot of the organism with a modified scalpel. All sampled adults were at least 60 mm in shell length. Adult samples at each site are stored together in a single 15-ml tube. Recruit samples (n=2276) represent the entire organism. All recruit samples were a maximum of 30 mm shell length. Recruit samples at each site are stored together in a ziplock bag. All samples were frozen in the field in a cooler with dry ice and/or container with liquid nitrogen, then transported to California Polytechnic State University and stored long-term in a minus ~70C freezer in the Biological Sciences Department.</p>
Funding provided by NSF Division of Ocean Sciences (NSF OCE) Award Number: OCE-1924537 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=1924537
Funding provided by NSF Division of Ocean Sciences (NSF OCE) Award Number: OCE-1924505 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=1924505
Funding provided by NSF Division of Ocean Sciences (NSF OCE) Award Number: OCE-1924604 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=1924604
completed
Crow White
Cal Poly San Luis Obispo
805-756-2954
California Polytechnic State University 1 Grand Avenue
San Luis Obispo
CA
93407
US
cwhite31@calpoly.edu
pointOfContact
Mark Christie
Purdue University
765-494-2070
Purdue University Biological Sciences 915 W. State Street
West Lafayette
IN
47907-2054
US
markchristie@purdue.edu
pointOfContact
Robert J. Toonen
Hawaii Institute of Marine Biology
808-236-7401
Hawaii Institute of Marine Biology 46-007 Lilipuna Rd
Kaneohe
HI
96744
USA
rjtoonen@gmail.com
pointOfContact
asNeeded
Dataset Version: 1
Unknown
Year
Site_description
site_CODE
Latitude
Longitude
Adult_tissues
Recruits
theme
None, User defined
year
site description
Site_ID
latitude
longitude
count
featureType
BCO-DMO Standard Parameters
otherRestrictions
otherRestrictions
Access Constraints: none. Use Constraints: Please follow guidelines at: http://www.bco-dmo.org/terms-use Distribution liability: Under no circumstances shall BCO-DMO be liable for any direct, incidental, special, consequential, indirect, or punitive damages that result from the use of, or the inability to use, the materials in this data submission. If you are dissatisfied with any materials in this data submission your sole and exclusive remedy is to discontinue use.
Collaborative Research: RUI: Combined spatial and temporal analyses of population connectivity during a northern range expansion
https://osprey.bco-dmo.org/project/851109
Collaborative Research: RUI: Combined spatial and temporal analyses of population connectivity during a northern range expansion
<p><em>NSF Award Abstract:</em><br />
Where do young marine fish and shellfish come from? This project aims to improve our understanding of how coastal marine populations are connected in space and time. Coastal populations are replenished through the arrival of minuscule larvae that have been dispersed for weeks to months in the open ocean after spawning at remote sites. The combination of the long dispersal period of marine fish and shellfish larvae and the varying ocean currents results in complex patterns of "connectivity" among populations near and far. Identifying these patterns of connectivity is fundamental to marine science and critical for effective fisheries management and conservation, yet it remains an unresolved component of marine ecology. The study species is currently expanding its biogeographic range up the U.S. west coast. By genetically analyzing individuals from across the species' range, including offspring spawned in the laboratory by experimentally-crossed individuals collected in the field from throughout the species historical and expanded range, certain genes can serve to differentiate populations along the coast. The team leverages the statistical power of these geographically-informative genes to assign thousands of young collected in the field to the source populations that spawned them (across the species' range and over multiple years). The team then quantifies patterns of connectivity over multiple years, and tests fundamental hypotheses on the spatial scale, temporal variability, biogeographic patterns, and biophysical drivers of population connectivity. The project trains approximately two dozen U.S. university students in molecular ecology and marine science, as well as creating intellectual linkages among Ph.D.-granting and non-Ph.D.-granting universities. The project also supports further development of a K-12 education program that uses SCUBA diving and videography to teach elementary school students Next Generation Science Standards and train them for careers in science, technology, engineering and mathematics.</p>
<p>Using a kelp forest gastropod and fisheries species (Kellet's whelk, Kelletia kelletii), this project combines genome-wide Restriction site Associated DNA (RAD) loci with transcriptomic loci identified from common-garden laboratory crosses of individuals from the species' historical and expanded range to identify geographically-informative loci that maximize power for individual assignment testing. Leveraging the combined power of these loci, genetic assignment of approximately three thousand recruit samples to 20 putative source populations allows the team to construct three independent years of connectivity matrices and test some of the most fundamental questions in marine ecology, including: 1) Are marine populations open or closed and at what scales? 2) To what degree is the evolutionary pattern of gene flow represented by single versus multiple generations of connectivity events? And, 3) How spatially heterogeneous and temporally variable is population connectivity? Can one year of connectivity data predict anything about the next? Additionally, by focusing on a range-expanding species with common life history traits, the team addresses a number of questions with broad applicability and significant ecological and societal implications: 4) How much is population connectivity influenced by post-recruitment demographic and evolutionary processes? 5) How well-connected are historic- and expanded-range populations? And, of particular relevance to climate change, 6) Are El Nino oceanographic conditions, which are predicted to increase in frequency and intensity this century, driving the poleward range expansion of this coastal marine species? By coupling common-garden experimental crosses to identify maximally-informative transcriptomic loci with genomic RAD analysis of field samples, this project aims to accurately and precisely quantify marine population connectivity in high gene flow species with large population sizes.</p>
<p>This award reflects NSF's statutory mission and has been deemed worthy of support through evaluation using the Foundation's intellectual merit and broader impacts review criteria.</p>
KW connectivity
largerWorkCitation
project
eng; USA
oceans
-121.939
-114.362
27.1533
36.6182
2015-01-01
2017-12-31
California, USA and Baja, Mexico coast
0
BCO-DMO catalogue of parameters from Wild adult and recruit Kelletia kelletii samples from 2015 to 2017 (KW connectivity project)
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
http://lod.bco-dmo.org/id/dataset-parameter/874469.rdf
Name: Year
Units: unitless
Description: <p>Year of recruit collection; format: YYYY</p>
http://lod.bco-dmo.org/id/dataset-parameter/874470.rdf
Name: Site_description
Units: unitless
Description: <p>Local name of site</p>
http://lod.bco-dmo.org/id/dataset-parameter/874471.rdf
Name: site_CODE
Units: unitless
Description: <p>Unique site code name</p>
http://lod.bco-dmo.org/id/dataset-parameter/874472.rdf
Name: Latitude
Units: degrees North
Description: <p>Latitude of site; Positive indicates North</p>
http://lod.bco-dmo.org/id/dataset-parameter/874473.rdf
Name: Longitude
Units: degrees West
Description: <p>Longitude of site; Negative indicates West</p>
http://lod.bco-dmo.org/id/dataset-parameter/874474.rdf
Name: Adult_tissues
Units: count
Description: <p>Adult tissues collected</p>
http://lod.bco-dmo.org/id/dataset-parameter/874475.rdf
Name: Recruits
Units: count
Description: <p>Whole recruits collected</p>
GB/NERC/BODC > British Oceanographic Data Centre, Natural Environment Research Council, United Kingdom
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
5928
https://darchive.mblwhoilibrary.org/bitstream/1912/28956/1/dataset-874458_kk-wild-samples-2015-17__v1.tsv
download
https://doi.org/10.26008/1912/bco-dmo.874458.1
download
onLine
dataset
<p><strong>Methodology:&nbsp;</strong></p>
<p>Samples (n=6900) were collected during the summer months (June, July, August) of each year (2015, 2016, 2017). Samples were collected by hand at sub-tidal reefs using SCUBA. Adult samples (n=4624) represent ~60-100 mg tissue removed from the foot of the organism with a modified scalpel. All sampled adults were at least 60 mm in shell length. Adult samples at each site are stored together in a single 15-ml tube. Recruit samples (n=2276) represent the entire organism. All recruit samples were a maximum of 30 mm shell length. Recruit samples at each site are stored together in a ziplock bag. All samples were frozen in the field in a cooler with dry ice and/or container with liquid nitrogen, then transported to California Polytechnic State University and stored long-term in a minus ~70C freezer in the Biological Sciences Department.</p>
Specified by the Principal Investigator(s)
<p><strong>BCO-DMO Processing Notes</strong></p>
<ul>
<li>Removed&nbsp;apostrophes from Site_description column</li>
<li>Renamed column headers by replacing any spaces with underscores (_)</li>
</ul>
Specified by the Principal Investigator(s)
asNeeded
7.x-1.1
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact