http://lod.bco-dmo.org/id/dataset/874841
eng; USA
utf8
dataset
Highest level of data collection, from a common set of sensors or instrumentation, usually within the same research project
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
2022-05-24
ISO 19115-2 Geographic Information - Metadata - Part 2: Extensions for Imagery and Gridded Data
ISO 19115-2:2009(E)
Dissolved nutrient data from RVIB Nathaniel B Palmer cruise (NBP18-01) in the Amundsen and Ross Seas from December 2017 to March 2018
2022-05-25
publication
2022-05-25
revision
Marine Biological Laboratory/Woods Hole Oceanographic Institution Library (MBLWHOI DLA)
2022-06-21
publication
https://doi.org/10.26008/1912/bco-dmo.874841.1
Mak A. Saito
Woods Hole Oceanographic Institution
principalInvestigator
Giacomo DiTullio
College of Charleston - Hollings Marine Lab
principalInvestigator
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
publisher
Cite this dataset as: Saito, M. A., DiTullio, G. (2022) Dissolved nutrient data from RVIB Nathaniel B Palmer cruise (NBP18-01) in the Amundsen and Ross Seas from December 2017 to March 2018. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2022-05-25 [if applicable, indicate subset used]. doi:10.26008/1912/bco-dmo.874841.1 [access date]
Methods and Sampling: <p>Hydrographic data was collected during&nbsp;the RVIB Nathaniel B. Palmer cruise (NBP1801) from December 31st,&nbsp;2017 to March 3rd, 2018.&nbsp;Samples were collected by&nbsp;trace metal rosette (TMR) using the Saito laboratory 8L X-Niskin bottles. Bottles were brought into a clean van, pressurized with high-purity nitrogen gas and filtered through 0.2 micron 142mm Supor membrane filters. Nutrient samples were filled in acid-washed 60mL HDPE bottles and frozen until analysis.&nbsp;</p>
<p>Nutrient analyses were conducted by Joe Jennings at Oregon State University using a&nbsp;nutrient autoanalyzer following the methods of Noble et al. (2012).&nbsp;Technicon AutoAnalyzer II components were used to measure phosphate and ammonium. Alpkem rapid flow analyzer (RFA) 300 components were used to measure silicic acid, nitrate+nitrite, and nitrite.</p>
<p>For quality control (QC) notes, please see the document "Quality Control notes for NBP1801 nutrients" in the Supplemental Files section.&nbsp;</p>
<p><u>NOTE</u>:&nbsp;&nbsp;The PAR sensor was not present on the first leg of the cruise, so PAR values were not measured until Station 35.&nbsp;&nbsp;</p>
Funding provided by NSF Office of Polar Programs (formerly NSF PLR) (NSF OPP) Award Number: OPP-1644073 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=1644073
Funding provided by NSF Office of Polar Programs (formerly NSF PLR) (NSF OPP) Award Number: OPP-1643684 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=1643684
Funding provided by NSF Office of Polar Programs (formerly NSF PLR) (NSF OPP) Award Number: OPP-1643845 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=1643845
completed
Mak A. Saito
Woods Hole Oceanographic Institution
508-289-2393
266 Woods Hole Rd. MS #51 Watson Lab
Woods Hole
MA
02543
USA
msaito@whoi.edu
pointOfContact
Giacomo DiTullio
College of Charleston - Hollings Marine Lab
843-953-9196
Hollings Marine Lab 205 Fort Johnson Rd.
Charleston
SC
29412
USA
ditullioj@cofc.edu
pointOfContact
asNeeded
Dataset Version: 1
Unknown
Date_sampled
Cruise
Station
Latitude
Longitude
Bottle_Number
Depth
Bottom_depth
Temperature
Conductivity
dO2
Fluorescence
Transmisson_pct
PAR
Salinity
PO4
NO3_NO2
Silicate
NO2
NH4
Alpkem rapid flow analyzer (RFA 300)
Biospherical Instruments QSP-2350
8L X-Niskin bottles
Sea-Bird SBE3 plus (SBE 3P)
Sea-Bird SBE 43 7000m
Sea-Bird 4C conductivity sensor
Technicon AutoAnalyzer II
WetLabs ECO-FL (FLRTD-3928)
theme
None, User defined
date
Cruise identfier
station
latitude
longitude
bottle
depth
depth_bottom
water temperature at measurement depth
conductivity
dissolved Oxygen
fluorescence
transmission
PAR
salinity
phosphate
nitrate plus nitrite
Silicate (reactive silica)
Nitrite
Ammonium
featureType
BCO-DMO Standard Parameters
Alpkem RFA300
Biospherical PAR sensor
CTD Sea-Bird SBE 911plus
Niskin bottle
Sea-Bird SBE 3plus Temperature Sensor
Sea-Bird SBE 43 Dissolved Oxygen Sensor
Sea-Bird SBE-4 Conductivity Sensor
Technicon AutoAnalyzer II
Wet Labs ECO-AFL/FL Fluorometer
instrument
BCO-DMO Standard Instruments
NBP1801
service
Deployment Activity
Western Ross Sea, Southern Ocean
place
Locations
otherRestrictions
otherRestrictions
Access Constraints: none. Use Constraints: Please follow guidelines at: http://www.bco-dmo.org/terms-use Distribution liability: Under no circumstances shall BCO-DMO be liable for any direct, incidental, special, consequential, indirect, or punitive damages that result from the use of, or the inability to use, the materials in this data submission. If you are dissatisfied with any materials in this data submission your sole and exclusive remedy is to discontinue use.
Collaborative Research: Cobalamin and Iron Co-Limitation Of Phytoplankton Species in Terra Nova Bay
https://osprey.bco-dmo.org/project/774945
Collaborative Research: Cobalamin and Iron Co-Limitation Of Phytoplankton Species in Terra Nova Bay
<p>NSF abstract:<br />
Phytoplankton blooms in the coastal waters of the Ross Sea, Antarctica are typically dominated by either diatoms or Phaeocystis Antarctica (a flagellated algae that often can form large colonies in a gelatinous matrix). The project seeks to determine if an association of bacterial populations with Phaeocystis antarctica colonies can directly supply Phaeocystis with Vitamin B12, which can be an important co-limiting micronutrient in the Ross Sea. The supply of an essential vitamin coupled with the ability to grow at lower iron concentrations may put Phaeocystis at a competitive advantage over diatoms. Because Phaeocystis cells can fix more carbon than diatoms and Phaeocystis are not grazed as efficiently as diatoms, the project will help in refining understanding of carbon dynamics in the region as well as the basis of the food web webs. Such understanding also has the potential to help refine predictive ecological models for the region. The project will conduct public outreach activities and will contribute to undergraduate and graduate research. Engagement of underrepresented students will occur during summer student internships. A collaboration with Italian Antarctic researchers, who have been studying the Terra Nova Bay ecosystem since the 1980s, aims to enhance the project and promote international scientific collaborations.</p>
<p>The study will test whether a mutualistic symbioses between attached bacteria and Phaeocystis provides colonial cells a mechanism for alleviating chronic Vitamin B12 co-limitation effects thereby conferring them with a competitive advantage over diatom communities. The use of drifters in a time series study will provide the opportunity to track in both space and time a developing algal bloom in Terra Nova Bay and to determine community structure and the physiological nutrient status of microbial populations. A combination of flow cytometry, proteomics, metatranscriptomics, radioisotopic and stable isotopic labeling experiments will determine carbon and nutrient uptake rates and the role of bacteria in mitigating potential vitamin B12 and iron limitation. Membrane inlet and proton transfer reaction mass spectrometry will also be used to estimate net community production and release of volatile organic carbon compounds that are climatically active. Understanding how environmental parameters can influence microbial community dynamics in Antarctic coastal waters will advance an understanding of how changes in ocean stratification and chemistry could impact the biogeochemistry and food web dynamics of Southern Ocean ecosystems.</p>
CICLOPS
largerWorkCitation
project
eng; USA
oceans
Western Ross Sea, Southern Ocean
160
-115
-80
-70
2017-12-31
2018-01-03
Amundsen Sea, Ross Sea, Terra Nova Bay
0
BCO-DMO catalogue of parameters from Dissolved nutrient data from RVIB Nathaniel B Palmer cruise (NBP18-01) in the Amundsen and Ross Seas from December 2017 to March 2018
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
http://lod.bco-dmo.org/id/dataset-parameter/875021.rdf
Name: Date_sampled
Units: unitless
Description: <p>Date of sampling</p>
http://lod.bco-dmo.org/id/dataset-parameter/875022.rdf
Name: Cruise
Units: unitless
Description: <p>Cruise ID</p>
http://lod.bco-dmo.org/id/dataset-parameter/875023.rdf
Name: Station
Units: unitless
Description: <p>Station</p>
http://lod.bco-dmo.org/id/dataset-parameter/875024.rdf
Name: Latitude
Units: decimal degrees
Description: <p>Latitude</p>
http://lod.bco-dmo.org/id/dataset-parameter/875025.rdf
Name: Longitude
Units: decimal degrees
Description: <p>Longitude</p>
http://lod.bco-dmo.org/id/dataset-parameter/875026.rdf
Name: Bottle_Number
Units: unitless
Description: <p>Niskin bottle number</p>
http://lod.bco-dmo.org/id/dataset-parameter/875027.rdf
Name: Depth
Units: meters (m)
Description: <p>Depth at which water sample was collected</p>
http://lod.bco-dmo.org/id/dataset-parameter/875028.rdf
Name: Bottom_depth
Units: meters (m)
Description: <p>Depth of seafloor</p>
http://lod.bco-dmo.org/id/dataset-parameter/875029.rdf
Name: Temperature
Units: degrees Celsius (°C)
Description: <p>Temperature from primary sensor</p>
http://lod.bco-dmo.org/id/dataset-parameter/875030.rdf
Name: Conductivity
Units: milliSiemens per centimeter (mS/cm)
Description: <p>Conductivity from primary sensor</p>
http://lod.bco-dmo.org/id/dataset-parameter/875031.rdf
Name: dO2
Units: milligrams per liter (mg/L)
Description: <p>Dissolved Oxygen from secondary sensor</p>
http://lod.bco-dmo.org/id/dataset-parameter/875032.rdf
Name: Fluorescence
Units: milligrams per cubic meter (mg/m^3)
Description: <p>Fluorescence</p>
http://lod.bco-dmo.org/id/dataset-parameter/875033.rdf
Name: Transmisson_pct
Units: percent (%)
Description: <p>Percent transmission</p>
http://lod.bco-dmo.org/id/dataset-parameter/875034.rdf
Name: PAR
Units: watts per square meter (W/m^2)
Description: <p>Photosynthetically active radiation</p>
http://lod.bco-dmo.org/id/dataset-parameter/875035.rdf
Name: Salinity
Units: PSU
Description: <p>Salinity</p>
http://lod.bco-dmo.org/id/dataset-parameter/875036.rdf
Name: PO4
Units: micromolar (uM)
Description: <p>Phosphate</p>
http://lod.bco-dmo.org/id/dataset-parameter/875037.rdf
Name: NO3_NO2
Units: micromolar (uM)
Description: <p>Nitrate plus nitrite</p>
http://lod.bco-dmo.org/id/dataset-parameter/875038.rdf
Name: Silicate
Units: micromolar (uM)
Description: <p>Silicate</p>
http://lod.bco-dmo.org/id/dataset-parameter/875039.rdf
Name: NO2
Units: micromolar (uM)
Description: <p>Nitrite</p>
http://lod.bco-dmo.org/id/dataset-parameter/875040.rdf
Name: NH4
Units: micromolar (uM)
Description: <p>Ammonia</p>
GB/NERC/BODC > British Oceanographic Data Centre, Natural Environment Research Council, United Kingdom
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
40382
https://darchive.mblwhoilibrary.org/bitstream/1912/29043/1/dataset-874841_ciclops-dissolved-nutrients__v1.tsv
download
https://doi.org/10.26008/1912/bco-dmo.874841.1
download
onLine
dataset
<p>Hydrographic data was collected during&nbsp;the RVIB Nathaniel B. Palmer cruise (NBP1801) from December 31st,&nbsp;2017 to March 3rd, 2018.&nbsp;Samples were collected by&nbsp;trace metal rosette (TMR) using the Saito laboratory 8L X-Niskin bottles. Bottles were brought into a clean van, pressurized with high-purity nitrogen gas and filtered through 0.2 micron 142mm Supor membrane filters. Nutrient samples were filled in acid-washed 60mL HDPE bottles and frozen until analysis.&nbsp;</p>
<p>Nutrient analyses were conducted by Joe Jennings at Oregon State University using a&nbsp;nutrient autoanalyzer following the methods of Noble et al. (2012).&nbsp;Technicon AutoAnalyzer II components were used to measure phosphate and ammonium. Alpkem rapid flow analyzer (RFA) 300 components were used to measure silicic acid, nitrate+nitrite, and nitrite.</p>
<p>For quality control (QC) notes, please see the document "Quality Control notes for NBP1801 nutrients" in the Supplemental Files section.&nbsp;</p>
<p><u>NOTE</u>:&nbsp;&nbsp;The PAR sensor was not present on the first leg of the cruise, so PAR values were not measured until Station 35.&nbsp;&nbsp;</p>
Specified by the Principal Investigator(s)
<p><u><strong>BCO-DMO processing</strong></u><br />
- converted Date to YMD format<br />
-&nbsp;added conventional header with dataset name, PI name, version date<br />
-&nbsp;modified parameter names to conform with BCO-DMO naming conventions</p>
Specified by the Principal Investigator(s)
asNeeded
7.x-1.1
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
Alpkem rapid flow analyzer (RFA 300)
Alpkem rapid flow analyzer (RFA 300)
PI Supplied Instrument Name: Alpkem rapid flow analyzer (RFA 300) PI Supplied Instrument Description:Alpkem rapid flow analyzer (RFA) 300 components were used to measure silicic acid, nitrate+nitrite, and nitrite. Instrument Name: Alpkem RFA300 Instrument Short Name:Alpkem RFA300 Instrument Description: A rapid flow analyser (RFA) that may be used to measure nutrient concentrations in seawater. It is an air-segmented, continuous flow instrument comprising a sampler, a peristaltic pump which simultaneously pumps samples, reagents and air bubbles through the system, analytical cartridge, heating bath, colorimeter, data station, and printer. The RFA-300 was a precursor to the smaller Alpkem RFA/2 (also RFA II or RFA-2). Community Standard Description: http://vocab.nerc.ac.uk/collection/L22/current/TOOL0414/
Biospherical Instruments QSP-2350
Biospherical Instruments QSP-2350
PI Supplied Instrument Name: Biospherical Instruments QSP-2350 PI Supplied Instrument Description:Trace metal rosette had hydrographic sensors including Biospherical Instruments QSP-2350 PAR sensor Instrument Name: Biospherical PAR sensor Instrument Short Name: Instrument Description: An irradiance sensor designed to measure Photosynthetically Active Radiation (PAR), manufactured by Biospherical Instruments Inc.
PI Supplied Instrument Name: Instrument Name: CTD Sea-Bird SBE 911plus Instrument Short Name:CTD SBE 911plus Instrument Description: The Sea-Bird SBE 911 plus is a type of CTD instrument package for continuous measurement of conductivity, temperature and pressure. The SBE 911 plus includes the SBE 9plus Underwater Unit and the SBE 11plus Deck Unit (for real-time readout using conductive wire) for deployment from a vessel. The combination of the SBE 9 plus and SBE 11 plus is called a SBE 911 plus. The SBE 9 plus uses Sea-Bird's standard modular temperature and conductivity sensors (SBE 3 plus and SBE 4). The SBE 9 plus CTD can be configured with up to eight auxiliary sensors to measure other parameters including dissolved oxygen, pH, turbidity, fluorescence, light (PAR), light transmission, etc.). more information from Sea-Bird Electronics Community Standard Description: http://vocab.nerc.ac.uk/collection/L22/current/TOOL0058/
8L X-Niskin bottles
8L X-Niskin bottles
PI Supplied Instrument Name: 8L X-Niskin bottles PI Supplied Instrument Description:Samples were collected using Saito laboratory 8L X-Niskin bottles. Instrument Name: Niskin bottle Instrument Short Name:Niskin bottle Instrument Description: A Niskin bottle (a next generation water sampler based on the Nansen bottle) is a cylindrical, non-metallic water collection device with stoppers at both ends. The bottles can be attached individually on a hydrowire or deployed in 12, 24, or 36 bottle Rosette systems mounted on a frame and combined with a CTD. Niskin bottles are used to collect discrete water samples for a range of measurements including pigments, nutrients, plankton, etc. Community Standard Description: http://vocab.nerc.ac.uk/collection/L22/current/TOOL0412/
Sea-Bird SBE3 plus (SBE 3P)
Sea-Bird SBE3 plus (SBE 3P)
PI Supplied Instrument Name: Sea-Bird SBE3 plus (SBE 3P) Instrument Name: Sea-Bird SBE 3plus Temperature Sensor Instrument Short Name:SBE 3P Instrument Description: The Sea-Bird SBE 3plus water temperature sensor is designed for use on the SBE 9plus CTD system. The sensor operates over the range -5 to +35 °C, a resolution of 0.0003 °C at 24 Hz and an initial accuracy of ± 0.001 °C. The typical sampling rate is 24 Hz, and the sensor has a depth rating of 6800 meters (aluminium housing) or 10500 meters (titanium housing).
Sea-Bird SBE 43 7000m
Sea-Bird SBE 43 7000m
PI Supplied Instrument Name: Sea-Bird SBE 43 7000m PI Supplied Instrument Description:Trace metal rosette had hydrographic sensors including Sea-Bird SBE 43 7000m Dissolved Oxygen sensor
Instrument Name: Sea-Bird SBE 43 Dissolved Oxygen Sensor Instrument Short Name:SBE-43 DO Instrument Description: The Sea-Bird SBE 43 dissolved oxygen sensor is a redesign of the Clark polarographic membrane type of dissolved oxygen sensors. more information from Sea-Bird Electronics Community Standard Description: http://vocab.nerc.ac.uk/collection/L22/current/TOOL0036/
Sea-Bird 4C conductivity sensor
Sea-Bird 4C conductivity sensor
PI Supplied Instrument Name: Sea-Bird 4C conductivity sensor Instrument Name: Sea-Bird SBE-4 Conductivity Sensor Instrument Short Name:SBE-4 Conductivity Instrument Description: The Sea-Bird SBE-4 conductivity sensor is a modular, self-contained instrument that measures conductivity from 0 to 7 Siemens/meter. The sensors (Version 2; S/N 2000 and higher) have electrically isolated power circuits and optically coupled outputs to eliminate any possibility of noise and corrosion caused by ground loops. The sensing element is a cylindrical, flow-through, borosilicate glass cell with three internal platinum electrodes. Because the outer electrodes are connected together, electric fields are confined inside the cell, making the measured resistance (and instrument calibration) independent of calibration bath size or proximity to protective cages or other objects. Community Standard Description: http://vocab.nerc.ac.uk/collection/L22/current/TOOL0417/
Technicon AutoAnalyzer II
Technicon AutoAnalyzer II
PI Supplied Instrument Name: Technicon AutoAnalyzer II PI Supplied Instrument Description:Technicon AutoAnalyzer II components were used to measure phosphate and ammonium Instrument Name: Technicon AutoAnalyzer II Instrument Short Name: Instrument Description: A rapid flow analyzer that may be used to measure nutrient concentrations in seawater. It is a continuous segmented flow instrument consisting of a sampler, peristaltic pump, analytical cartridge, heating bath, and colorimeter. See more information about this instrument from the manufacturer. Community Standard Description: http://vocab.nerc.ac.uk/collection/L22/current/TOOL0291/
WetLabs ECO-FL (FLRTD-3928)
WetLabs ECO-FL (FLRTD-3928)
PI Supplied Instrument Name: WetLabs ECO-FL (FLRTD-3928) PI Supplied Instrument Description:Trace metal rosette had hydrographic sensors including WetLabs ECO-FL (FLRTD-3928) flourometer Instrument Name: Wet Labs ECO-AFL/FL Fluorometer Instrument Short Name:ECO AFL/FL Instrument Description: The Environmental Characterization Optics (ECO) series of single channel fluorometers delivers both high resolution and wide ranges across the entire line of parameters using 14 bit digital processing. The ECO series excels in biological monitoring and dye trace studies. The potted optics block results in long term stability of the instrument and the optional anti-biofouling technology delivers truly long term field measurements.
more information from Wet Labs Community Standard Description: http://vocab.nerc.ac.uk/collection/L22/current/TOOL0172/
Cruise: NBP1801
NBP1801
Community Standard Description
International Council for the Exploration of the Sea
RVIB Nathaniel B. Palmer
vessel
NBP1801
Giacomo DiTullio
College of Charleston
https://service.rvdata.us/data/cruise/NBP1801/doc/NBP1801DATA.pdf
Report describing NBP1801
Community Standard Description
International Council for the Exploration of the Sea
RVIB Nathaniel B. Palmer
vessel