http://lod.bco-dmo.org/id/dataset/874909
eng; USA
utf8
dataset
Highest level of data collection, from a common set of sensors or instrumentation, usually within the same research project
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
2022-05-25
ISO 19115-2 Geographic Information - Metadata - Part 2: Extensions for Imagery and Gridded Data
ISO 19115-2:2009(E)
Hydrography sensor data from trace metal rosette (TMR) casts at 26 stations near coastal Antarctica during RVIB Nathaniel B. Palmer cruise NBP18-01 from Dec 2017 to Feb 2018
2024-04-01
publication
2024-04-01
revision
Marine Biological Laboratory/Woods Hole Oceanographic Institution Library (MBLWHOI DLA)
2024-04-05
publication
https://doi.org/10.26008/1912/bco-dmo.874909.1
Mak A. Saito
Woods Hole Oceanographic Institution
principalInvestigator
Giacomo DiTullio
College of Charleston - Hollings Marine Lab
principalInvestigator
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
publisher
Cite this dataset as: Saito, M. A., DiTullio, G., Chmiel, R. J. (2024) Hydrography sensor data from trace metal rosette (TMR) casts at 26 stations near coastal Antarctica during RVIB Nathaniel B. Palmer cruise NBP18-01 from Dec 2017 to Feb 2018. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2024-04-01 [if applicable, indicate subset used]. doi:10.26008/1912/bco-dmo.874909.1 [access date]
CICLOPS TMR Hydrography data Dataset Description: Methods and Sampling: <p>Sensors were deployed on a titanium trace metal rosette (TMR) in tandem with trace metal clean bottle samples during the RVIB Nathaniel B. Palmer cruise (NBP18-01) from December 2017 to February 2018 in coastal Antarctica.&nbsp; TMR casts were performed at 26 stations&nbsp;in the Amundsen Sea, Ross Sea and Terra Nova Bay.&nbsp;Parameters collected include pressure, temperature, conductivity, oxygen, fluorescence, beam transmission, PAR, and salinity.&nbsp;</p>
<p>The profiles in the dataset are from the up-cast of the TMR cast. More information on sensor data acquisition and processing can be found in "Data Report NBP18-01" from the United States Antarctic Program prepared by Matt Pullen and Bryan Chambers (see&nbsp;Supplemental Docs section).&nbsp;&nbsp;Trace metal rosette sensors are detailed on p.29.&nbsp;&nbsp;</p>
<p>For all duplicate sensors, the primary sensor was used for temperature and conductivity, and the secondary sensor was used for oxygen in the final hydrography dataset.</p>
<p><u>Problem report:</u><br />
The PAR sensor was only included on the TMR beginning at station 35.</p>
Funding provided by NSF Office of Polar Programs (formerly NSF PLR) (NSF OPP) Award Number: OPP-1644073 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=1644073
Funding provided by NSF Office of Polar Programs (formerly NSF PLR) (NSF OPP) Award Number: OPP-1643684 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=1643684
Funding provided by NSF Office of Polar Programs (formerly NSF PLR) (NSF OPP) Award Number: OPP-1643845 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=1643845
completed
Mak A. Saito
Woods Hole Oceanographic Institution
508-289-2393
266 Woods Hole Rd. MS #51 Watson Lab
Woods Hole
MA
02543
USA
msaito@whoi.edu
pointOfContact
Giacomo DiTullio
College of Charleston - Hollings Marine Lab
843-953-9196
Hollings Marine Lab 205 Fort Johnson Rd.
Charleston
SC
29412
USA
ditullioj@cofc.edu
pointOfContact
asNeeded
Dataset Version: 1
Unknown
Latitude
Longitude
TMR_Start_DateTime_UTC
Station
Pressure
Depth
Temperature
Conductivity
Oxygen
Fluorescence
Beam
PAR_Irradiance
Salinity
Valeport VA-500
Biospherical Instruments QSP-2350
Paroscientific 410K-134 CTD pressure sensor
PRR
Sea-Bird 3plus 10500m
Sea-Bird SBE 43 7000m
Sea-Bird 4C 10500m conductivity sensor
TMR
WetLabs ECO-FL fluorometer
WetLabs C-Star
theme
None, User defined
latitude
longitude
ISO_DateTime_UTC
station
water pressure
depth
water temperature at measurement depth
conductivity
dissolved Oxygen
fluorescence
transmission
PAR
salinity
featureType
BCO-DMO Standard Parameters
Altimeter
Biospherical PAR sensor
CTD Sea-Bird SBE 911plus
Paroscientific 410K Pressure Transducer
Radiometer
Sea-Bird SBE 3plus Temperature Sensor
Sea-Bird SBE 43 Dissolved Oxygen Sensor
Sea-Bird SBE-4 Conductivity Sensor
Trace Metal Bottle
Wet Labs ECO-AFL/FL Fluorometer
WET Labs {Sea-Bird WETLabs} C-Star transmissometer
instrument
BCO-DMO Standard Instruments
NBP1801
service
Deployment Activity
Western Ross Sea, Southern Ocean
place
Locations
otherRestrictions
otherRestrictions
Access Constraints: none. Use Constraints: Please follow guidelines at: http://www.bco-dmo.org/terms-use Distribution liability: Under no circumstances shall BCO-DMO be liable for any direct, incidental, special, consequential, indirect, or punitive damages that result from the use of, or the inability to use, the materials in this data submission. If you are dissatisfied with any materials in this data submission your sole and exclusive remedy is to discontinue use.
Collaborative Research: Cobalamin and Iron Co-Limitation Of Phytoplankton Species in Terra Nova Bay
https://osprey.bco-dmo.org/project/774945
Collaborative Research: Cobalamin and Iron Co-Limitation Of Phytoplankton Species in Terra Nova Bay
<p>NSF abstract:<br />
Phytoplankton blooms in the coastal waters of the Ross Sea, Antarctica are typically dominated by either diatoms or Phaeocystis Antarctica (a flagellated algae that often can form large colonies in a gelatinous matrix). The project seeks to determine if an association of bacterial populations with Phaeocystis antarctica colonies can directly supply Phaeocystis with Vitamin B12, which can be an important co-limiting micronutrient in the Ross Sea. The supply of an essential vitamin coupled with the ability to grow at lower iron concentrations may put Phaeocystis at a competitive advantage over diatoms. Because Phaeocystis cells can fix more carbon than diatoms and Phaeocystis are not grazed as efficiently as diatoms, the project will help in refining understanding of carbon dynamics in the region as well as the basis of the food web webs. Such understanding also has the potential to help refine predictive ecological models for the region. The project will conduct public outreach activities and will contribute to undergraduate and graduate research. Engagement of underrepresented students will occur during summer student internships. A collaboration with Italian Antarctic researchers, who have been studying the Terra Nova Bay ecosystem since the 1980s, aims to enhance the project and promote international scientific collaborations.</p>
<p>The study will test whether a mutualistic symbioses between attached bacteria and Phaeocystis provides colonial cells a mechanism for alleviating chronic Vitamin B12 co-limitation effects thereby conferring them with a competitive advantage over diatom communities. The use of drifters in a time series study will provide the opportunity to track in both space and time a developing algal bloom in Terra Nova Bay and to determine community structure and the physiological nutrient status of microbial populations. A combination of flow cytometry, proteomics, metatranscriptomics, radioisotopic and stable isotopic labeling experiments will determine carbon and nutrient uptake rates and the role of bacteria in mitigating potential vitamin B12 and iron limitation. Membrane inlet and proton transfer reaction mass spectrometry will also be used to estimate net community production and release of volatile organic carbon compounds that are climatically active. Understanding how environmental parameters can influence microbial community dynamics in Antarctic coastal waters will advance an understanding of how changes in ocean stratification and chemistry could impact the biogeochemistry and food web dynamics of Southern Ocean ecosystems.</p>
CICLOPS
largerWorkCitation
project
eng; USA
biota
oceans
Western Ross Sea, Southern Ocean
179.819
-116.001
-77.495
-72.751
2018-01-03
2018-02-18
Amundsen Sea, Ross Sea, Terra Nova Bay
0
BCO-DMO catalogue of parameters from Hydrography sensor data from trace metal rosette (TMR) casts at 26 stations near coastal Antarctica during RVIB Nathaniel B. Palmer cruise NBP18-01 from Dec 2017 to Feb 2018
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
http://lod.bco-dmo.org/id/dataset-parameter/882356.rdf
Name: Latitude
Units: decimal degrees
Description: <p>Latitude of sampling location (South is negative)</p>
http://lod.bco-dmo.org/id/dataset-parameter/882357.rdf
Name: Longitude
Units: decimal degrees
Description: <p>Longitude of sampling location (West is negative)</p>
http://lod.bco-dmo.org/id/dataset-parameter/882358.rdf
Name: TMR_Start_DateTime_UTC
Units: unitless
Description: <p>Trace metal rosette Start datetime</p>
http://lod.bco-dmo.org/id/dataset-parameter/882359.rdf
Name: Station
Units: unitless
Description: <p>Station number</p>
http://lod.bco-dmo.org/id/dataset-parameter/882360.rdf
Name: Pressure
Units: decibar
Description: <p>Pressure of seawater from CTD pressure sensor</p>
http://lod.bco-dmo.org/id/dataset-parameter/882361.rdf
Name: Depth
Units: meter
Description: <p>Depth of rosette from CTD altimeter</p>
http://lod.bco-dmo.org/id/dataset-parameter/882362.rdf
Name: Temperature
Units: degrees Celsius
Description: <p>Temperature of seawater from CTD temperature sensor</p>
http://lod.bco-dmo.org/id/dataset-parameter/882363.rdf
Name: Conductivity
Units: milliSiemens per centimeter (mS/cm)
Description: <p>Conductivity of seawater from CTD conductivity sensor</p>
http://lod.bco-dmo.org/id/dataset-parameter/882364.rdf
Name: Oxygen
Units: milliliter per liter (mL/L)
Description: <p>Concentration of dissolved oxygen from CTD oxygen sensor</p>
http://lod.bco-dmo.org/id/dataset-parameter/882365.rdf
Name: Fluorescence
Units: milligrams per cubic meter (mg/m^3)
Description: <p>Fluorescence of seawater from CTD fluorometer</p>
http://lod.bco-dmo.org/id/dataset-parameter/882366.rdf
Name: Beam
Units: percent (%)
Description: <p>Beam Transmission from CTD Transmissometer</p>
http://lod.bco-dmo.org/id/dataset-parameter/882367.rdf
Name: PAR_Irradiance
Units: watts per square meter (W/m^2)
Description: <p>Photosynthetically Active Radiation (PAR) from CTD PAR sensor</p>
http://lod.bco-dmo.org/id/dataset-parameter/882368.rdf
Name: Salinity
Units: practical salinity unit (PSU)
Description: <p>Salinity derived from conductivity measurements</p>
GB/NERC/BODC > British Oceanographic Data Centre, Natural Environment Research Council, United Kingdom
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
1939887
https://darchive.mblwhoilibrary.org/server/api/core/bitstreams/66103e11-d5df-4d4f-9a48-67bd260f5cdb/content
download
https://doi.org/10.26008/1912/bco-dmo.874909.1
download
onLine
dataset
<p>Sensors were deployed on a titanium trace metal rosette (TMR) in tandem with trace metal clean bottle samples during the RVIB Nathaniel B. Palmer cruise (NBP18-01) from December 2017 to February 2018 in coastal Antarctica.&nbsp; TMR casts were performed at 26 stations&nbsp;in the Amundsen Sea, Ross Sea and Terra Nova Bay.&nbsp;Parameters collected include pressure, temperature, conductivity, oxygen, fluorescence, beam transmission, PAR, and salinity.&nbsp;</p>
<p>The profiles in the dataset are from the up-cast of the TMR cast. More information on sensor data acquisition and processing can be found in "Data Report NBP18-01" from the United States Antarctic Program prepared by Matt Pullen and Bryan Chambers (see&nbsp;Supplemental Docs section).&nbsp;&nbsp;Trace metal rosette sensors are detailed on p.29.&nbsp;&nbsp;</p>
<p>For all duplicate sensors, the primary sensor was used for temperature and conductivity, and the secondary sensor was used for oxygen in the final hydrography dataset.</p>
<p><u>Problem report:</u><br />
The PAR sensor was only included on the TMR beginning at station 35.</p>
Specified by the Principal Investigator(s)
<p>The profiles in the dataset are from the up-cast of the TMR cast.&nbsp;More information on sensor data acquisition and processing can be found in "Data Report NBP18-01"&nbsp;(see&nbsp;Supplemental Docs section)</p>
<p>&nbsp;</p>
Specified by the Principal Investigator(s)
- converted latitude and longitude to decimal degrees (from degrees, decimal mins)
- converted Date to YMD format
- added conventional header with dataset name, PI name, version date
- modified parameter names to conform with BCO-DMO naming conventions
Specified by BCO-DMO Data Managers
asNeeded
7.x-1.1
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
Valeport VA-500
Valeport VA-500
PI Supplied Instrument Name: Valeport VA-500 Instrument Name: Altimeter Instrument Short Name:Altimeter Instrument Description: An instrument that measures height above a fixed surface. The data can be used to map ocean-surface topography and generate gridded surface height fields. Community Standard Description: http://vocab.nerc.ac.uk/collection/L05/current/379/
Biospherical Instruments QSP-2350
Biospherical Instruments QSP-2350
PI Supplied Instrument Name: Biospherical Instruments QSP-2350 Instrument Name: Biospherical PAR sensor Instrument Short Name: Instrument Description: An irradiance sensor designed to measure Photosynthetically Active Radiation (PAR), manufactured by Biospherical Instruments Inc.
PI Supplied Instrument Name: Instrument Name: CTD Sea-Bird SBE 911plus Instrument Short Name:CTD SBE 911plus Instrument Description: The Sea-Bird SBE 911 plus is a type of CTD instrument package for continuous measurement of conductivity, temperature and pressure. The SBE 911 plus includes the SBE 9plus Underwater Unit and the SBE 11plus Deck Unit (for real-time readout using conductive wire) for deployment from a vessel. The combination of the SBE 9 plus and SBE 11 plus is called a SBE 911 plus. The SBE 9 plus uses Sea-Bird's standard modular temperature and conductivity sensors (SBE 3 plus and SBE 4). The SBE 9 plus CTD can be configured with up to eight auxiliary sensors to measure other parameters including dissolved oxygen, pH, turbidity, fluorescence, light (PAR), light transmission, etc.). more information from Sea-Bird Electronics Community Standard Description: http://vocab.nerc.ac.uk/collection/L22/current/TOOL0058/
Paroscientific 410K-134 CTD pressure sensor
Paroscientific 410K-134 CTD pressure sensor
PI Supplied Instrument Name: Paroscientific 410K-134 CTD pressure sensor Instrument Name: Paroscientific 410K Pressure Transducer Instrument Short Name: Instrument Description: The Paroscientific 410K Pressure Transducer is an absolute pressure transducer with a Digiquartz pressure sensor and precision thermometer. Operates over a temperature range of 0-125 degC and a pressure range of 0-10000 psia with a typical accuracy of 0.01% and a resolution of 0.0001%.
PRR
PRR
PI Supplied Instrument Name: PRR PI Supplied Instrument Description:PRR (Underwater): Biospherical Instruments PRR-800
PRR (Mast): Biospherical Instruments PRR-810 Instrument Name: Radiometer Instrument Short Name:Radiometer Instrument Description: Radiometer is a generic term for a range of instruments used to measure electromagnetic radiation (radiance and irradiance) in the atmosphere or the water column. For example, this instrument category includes free-fall spectral radiometer (SPMR/SMSR System, Satlantic, Inc), profiling or deck cosine PAR units (PUV-500 and 510, Biospherical Instruments, Inc). This is a generic term used when specific type, make and model were not specified. Community Standard Description: http://vocab.nerc.ac.uk/collection/L05/current/122/
Sea-Bird 3plus 10500m
Sea-Bird 3plus 10500m
PI Supplied Instrument Name: Sea-Bird 3plus 10500m PI Supplied Instrument Description:Trace metal rosette had hydrographic sensors including Sea-Bird 3plus 10500m temperature sensor
Instrument Name: Sea-Bird SBE 3plus Temperature Sensor Instrument Short Name:SBE 3P Instrument Description: The Sea-Bird SBE 3plus water temperature sensor is designed for use on the SBE 9plus CTD system. The sensor operates over the range -5 to +35 °C, a resolution of 0.0003 °C at 24 Hz and an initial accuracy of ± 0.001 °C. The typical sampling rate is 24 Hz, and the sensor has a depth rating of 6800 meters (aluminium housing) or 10500 meters (titanium housing).
Sea-Bird SBE 43 7000m
Sea-Bird SBE 43 7000m
PI Supplied Instrument Name: Sea-Bird SBE 43 7000m Instrument Name: Sea-Bird SBE 43 Dissolved Oxygen Sensor Instrument Short Name:SBE-43 DO Instrument Description: The Sea-Bird SBE 43 dissolved oxygen sensor is a redesign of the Clark polarographic membrane type of dissolved oxygen sensors. more information from Sea-Bird Electronics Community Standard Description: http://vocab.nerc.ac.uk/collection/L22/current/TOOL0036/
Sea-Bird 4C 10500m conductivity sensor
Sea-Bird 4C 10500m conductivity sensor
PI Supplied Instrument Name: Sea-Bird 4C 10500m conductivity sensor PI Supplied Instrument Description:Trace metal rosette had hydrographic sensors including Sea-Bird 4C 10500m conductivity sensor
Instrument Name: Sea-Bird SBE-4 Conductivity Sensor Instrument Short Name:SBE-4 Conductivity Instrument Description: The Sea-Bird SBE-4 conductivity sensor is a modular, self-contained instrument that measures conductivity from 0 to 7 Siemens/meter. The sensors (Version 2; S/N 2000 and higher) have electrically isolated power circuits and optically coupled outputs to eliminate any possibility of noise and corrosion caused by ground loops. The sensing element is a cylindrical, flow-through, borosilicate glass cell with three internal platinum electrodes. Because the outer electrodes are connected together, electric fields are confined inside the cell, making the measured resistance (and instrument calibration) independent of calibration bath size or proximity to protective cages or other objects. Community Standard Description: http://vocab.nerc.ac.uk/collection/L22/current/TOOL0417/
TMR
TMR
PI Supplied Instrument Name: TMR Instrument Name: Trace Metal Bottle Instrument Short Name:TM Bottle Instrument Description: Trace metal (TM) clean rosette bottle used for collecting trace metal clean seawater samples. Community Standard Description: http://vocab.nerc.ac.uk/collection/L05/current/30/
WetLabs ECO-FL fluorometer
WetLabs ECO-FL fluorometer
PI Supplied Instrument Name: WetLabs ECO-FL fluorometer Instrument Name: Wet Labs ECO-AFL/FL Fluorometer Instrument Short Name:ECO AFL/FL Instrument Description: The Environmental Characterization Optics (ECO) series of single channel fluorometers delivers both high resolution and wide ranges across the entire line of parameters using 14 bit digital processing. The ECO series excels in biological monitoring and dye trace studies. The potted optics block results in long term stability of the instrument and the optional anti-biofouling technology delivers truly long term field measurements.
more information from Wet Labs Community Standard Description: http://vocab.nerc.ac.uk/collection/L22/current/TOOL0172/
WetLabs C-Star
WetLabs C-Star
PI Supplied Instrument Name: WetLabs C-Star Instrument Name: WET Labs {Sea-Bird WETLabs} C-Star transmissometer Instrument Short Name:WL CSTAR Trans Instrument Description: The C-Star transmissometer has a novel monolithic housing with a highly intgrated opto-electronic design to provide a low cost, compact solution for underwater measurements of beam transmittance. The C-Star is capable of free space measurements or flow-through sampling when used with a pump and optical flow tubes. The sensor can be used in profiling, moored, or underway applications. Available with a 6000 m depth rating.
More information on Sea-Bird website: https://www.seabird.com/c-star-transmissometer/product?id=60762467717 Community Standard Description: http://vocab.nerc.ac.uk/collection/L22/current/TOOL0160/
Cruise: NBP1801
NBP1801
Community Standard Description
International Council for the Exploration of the Sea
RVIB Nathaniel B. Palmer
vessel
NBP1801
Giacomo DiTullio
College of Charleston
https://service.rvdata.us/data/cruise/NBP1801/doc/NBP1801DATA.pdf
Report describing NBP1801
Community Standard Description
International Council for the Exploration of the Sea
RVIB Nathaniel B. Palmer
vessel