http://lod.bco-dmo.org/id/dataset/881834
eng; USA
utf8
dataset
Highest level of data collection, from a common set of sensors or instrumentation, usually within the same research project
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
2022-10-03
ISO 19115-2 Geographic Information - Metadata - Part 2: Extensions for Imagery and Gridded Data
ISO 19115-2:2009(E)
Daily temperature measurements on restored oyster reefs in Quonochontaug Pond, RI from July-August 2018 and September-October 2018
2022-11-01
publication
2022-11-01
revision
Marine Biological Laboratory/Woods Hole Oceanographic Institution Library (MBLWHOI DLA)
2022-11-02
publication
https://doi.org/10.26008/1912/bco-dmo.881834.1
A. Randall Hughes
Northeastern University
principalInvestigator
Theresa Davenport
Northeastern University
principalInvestigator
Jonathan Grabowski
Northeastern University
principalInvestigator
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
publisher
Cite this dataset as: Hughes, A. R., Davenport, T., Grabowski, J. (2022) Daily temperature measurements on restored oyster reefs in Quonochontaug Pond, RI from July-August 2018 and September-October 2018. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2022-11-01 [if applicable, indicate subset used]. doi:10.26008/1912/bco-dmo.881834.1 [access date]
Temperatures on restored oyster reefs Dataset Description: Methods and Sampling: <p>These data were published in Davenport et al., 2022 (Restoration Ecology). All figure numbers mentioned refer to Davenport et al., 2022 (Restoration Ecology).</p>
<p>Bottom water temperatures were collected during experimental tray deployment at Quonochontaug Pond, Rhode Island, USA, (41.3 N, 71.7 W). One Onset Tidbit v2 HOBO temperature logger was used per block in the summer of 2018 (July 10-August 6) and one logger at both the edge and interior of 3 reefs (one per block) in the fall of 2018 (September 7-October 4) (Fig. S2). Water temperatures were collected hourly during tray deployment.</p>
Funding provided by NSF Division of Ocean Sciences (NSF OCE) Award Number: OCE-1652320 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=1652320
completed
A. Randall Hughes
Northeastern University
781-581-7370
430 Nahant Rd.
Nahant
MA
01908
USA
ann.hughes@northeastern.edu
pointOfContact
Theresa Davenport
Northeastern University
430 Nahant Rd.
Nahant
MA
01908
USA
tdavenport@agcenter.lsu.edu
pointOfContact
Jonathan Grabowski
Northeastern University
781-581-7370 x337
430 Nahant Rd.
Nahant
MA
01908
USA
j.grabowski@northeastern.edu
pointOfContact
asNeeded
Dataset Version: 1
Unknown
season
block
reef
treat
julian
temp_min
temp_max
temp_mean
HOBO TidbiT v2 water temperature data logger
theme
None, User defined
season
experiment id
station id
treatment
Julian day as a decimal (time elapsed in days from 00:00 on January 1st 4713 BC)
water temperature at measurement depth
featureType
BCO-DMO Standard Parameters
Onset HOBO TidbiT v2 (UTBI-001) temperature logger
instrument
BCO-DMO Standard Instruments
otherRestrictions
otherRestrictions
Access Constraints: none. Use Constraints: Please follow guidelines at: http://www.bco-dmo.org/terms-use Distribution liability: Under no circumstances shall BCO-DMO be liable for any direct, incidental, special, consequential, indirect, or punitive damages that result from the use of, or the inability to use, the materials in this data submission. If you are dissatisfied with any materials in this data submission your sole and exclusive remedy is to discontinue use.
CAREER: Linking genetic diversity, population density, and disease prevalence in seagrass and oyster ecosystems
https://osprey.bco-dmo.org/project/709942
CAREER: Linking genetic diversity, population density, and disease prevalence in seagrass and oyster ecosystems
<p><em>NSF Award Abstract:</em><br />
Disease outbreaks in the ocean are increasing, causing losses of ecologically important marine species, but the factors contributing to these outbreaks are not well understood. This 5-year CAREER project will study disease prevalence and intensity in two marine foundation species - the seagrass Zostera marina and the Eastern oyster Crassostrea virginica. More specifically, host-disease relationships will be explored to understand how genetic diversity and population density of the host species impacts disease transmission and risk. This work will pair large-scale experimental restorations and smaller-scale field experiments to examine disease-host relationships across multiple spatial scales. Comparisons of patterns and mechanisms across the two coastal systems will provide an important first step towards identifying generalities in the diversity-density-disease relationship. To enhance the broader impacts and utility of this work, the experiments will be conducted in collaboration with restoration practitioners and guided by knowledge ascertained from key stakeholder groups. The project will support the development of an early career female researcher and multiple graduate and undergraduate students. Students will be trained in state-of-the-art molecular techniques to quantify oyster and seagrass parasites. Key findings from the surveys and experimental work will be incorporated into undergraduate courses focused on Conservation Biology, Marine Biology, and Disease Ecology. Finally, students in these courses will help develop social-ecological surveys and mutual learning games to stimulate knowledge transfer with stakeholders through a series of workshops.</p>
<p>The relationship between host genetic diversity and disease dynamics is complex. In some cases, known as a dilution effect, diversity reduces disease transmission and risk. However, the opposite relationship, known as the amplification effect, can also occur when diversity increases the risk of infection. Even if diversity directly reduces disease risk, simultaneous positive effects of diversity on host density could lead to amplification by increasing disease transmission between infected and uninfected individuals. Large-scale field restorations of seagrasses (Zostera marina) and oysters (Crassostrea virginica) will be utilized to test the effects of host genetic diversity on host population density and disease prevalence/intensity. Additional field experiments independently manipulating host genetic diversity and density will examine the mechanisms leading to dilution or amplification. Conducting similar manipulations in two marine foundation species - one a clonal plant and the other a non-clonal animal - will help identify commonalities in the diversity-density-disease relationship. Further, collaborations among project scientists, students, and stakeholders will enhance interdisciplinary training and help facilitate the exchange of information to improve management and restoration efforts. As part of these efforts, targeted surveys will be used to document the perceptions and attitudes of managers and restoration practitioners regarding genetic diversity and its role in ecological resilience and restoration.</p>
Seagrass and Oyster Ecosystems
largerWorkCitation
project
eng; USA
biota
oceans
-71.7
-71.7
41.3
41.3
2018-07-10
2018-10-04
Coastal New England
0
BCO-DMO catalogue of parameters from Daily temperature measurements on restored oyster reefs in Quonochontaug Pond, RI from July-August 2018 and September-October 2018
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
http://lod.bco-dmo.org/id/dataset-parameter/882372.rdf
Name: season
Units: unitless
Description: <p>season of tray deployment (summer or fall). HOBO loggers were attached to trays throughout tray deployment, collecting hourly temperatures.</p>
http://lod.bco-dmo.org/id/dataset-parameter/882373.rdf
Name: block
Units: unitless
Description: <p>numberical label for experimental block, 1-3; corresponds to Figure 1 in Davenport et al. 2022, Restoration Ecology.</p>
http://lod.bco-dmo.org/id/dataset-parameter/882374.rdf
Name: reef
Units: unitless
Description: <p>alphabetical label for the reef on which trays with hobo loggers were attached; corresponds to Figure 1 in Davenport et al. 2022. alphabetical label for the reef on which trays with hobo loggers were attached; corresponds to Figure 1 in Davenport et al. 2022, Restoration Ecology</p>
http://lod.bco-dmo.org/id/dataset-parameter/882375.rdf
Name: treat
Units: unitless
Description: <p>experimental treatment, including I (reef interior), E (reef edge), SHELL (shell control tray). Corresponds to Figure 1 in Davenport et al. 2022, Restoration Ecology.</p>
http://lod.bco-dmo.org/id/dataset-parameter/882376.rdf
Name: julian
Units: unitless
Description: <p>julian day of the year</p>
http://lod.bco-dmo.org/id/dataset-parameter/882377.rdf
Name: temp_min
Units: degrees Celsius
Description: <p>minimum temperature observed per day (measured once hourly)</p>
http://lod.bco-dmo.org/id/dataset-parameter/882378.rdf
Name: temp_max
Units: degrees Celsius
Description: <p>maximum temperature observed per day (measured once hourly)</p>
http://lod.bco-dmo.org/id/dataset-parameter/882379.rdf
Name: temp_mean
Units: degrees Celsius
Description: <p>mean temperature observed per day (measured once hourly)</p>
GB/NERC/BODC > British Oceanographic Data Centre, Natural Environment Research Council, United Kingdom
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
9483
https://darchive.mblwhoilibrary.org/bitstream/1912/29458/1/dataset-881834_temperatures-restored-oyster-reefs__v1.tsv
download
https://doi.org/10.26008/1912/bco-dmo.881834.1
download
onLine
dataset
<p>These data were published in Davenport et al., 2022 (Restoration Ecology). All figure numbers mentioned refer to Davenport et al., 2022 (Restoration Ecology).</p>
<p>Bottom water temperatures were collected during experimental tray deployment at Quonochontaug Pond, Rhode Island, USA, (41.3 N, 71.7 W). One Onset Tidbit v2 HOBO temperature logger was used per block in the summer of 2018 (July 10-August 6) and one logger at both the edge and interior of 3 reefs (one per block) in the fall of 2018 (September 7-October 4) (Fig. S2). Water temperatures were collected hourly during tray deployment.</p>
Specified by the Principal Investigator(s)
<p><strong>Data Processing:</strong><br />
Hourly temperatures were processed to average daily temperature (averaged by Julian day), maximum daily temperature (the maximum temperature recorded each day was selected), or minimum daily temperature (the minimum temperature recorded each day was selected).</p>
<p><strong>BCO-DMO Processing:</strong><br />
- Adjusted field/parameter names to comply with BCO-DMO naming conventions<br />
- Added a conventional header with dataset name, PI names, version date<br />
- Reorganized data, creating&nbsp;one row for each block-reef-treat-Julian day combination and separate columns for mean, maximum, and minimum temperature<br />
- Values in the columns "temp_min", "temp_max", and "temp_mean" were rounded to 3 decimal places</p>
Specified by the Principal Investigator(s)
asNeeded
7.x-1.1
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
HOBO TidbiT v2 water temperature data logger
HOBO TidbiT v2 water temperature data logger
PI Supplied Instrument Name: HOBO TidbiT v2 water temperature data logger Instrument Name: Onset HOBO TidbiT v2 (UTBI-001) temperature logger Instrument Short Name:HOBO TidBit v2 Instrument Description: A temperature logger that measures temperatures over a wide temperature range. It is designed for outdoor and underwater environments and is waterproof to 300 m. A solar radiation shield is required to obtain accurate air temperature measurements in sunlight (RS1 or M-RSA Solar Radiation Shield). With an operational temperature range between -20 degrees Celsius and +70 degrees Celsius, the TidbiT v2 has an accuracy of +/-0.21 and a resolution of 0.02 degrees Celsius. Community Standard Description: http://vocab.nerc.ac.uk/collection/L05/current/134/