http://lod.bco-dmo.org/id/dataset/905047
eng; USA
utf8
dataset
Highest level of data collection, from a common set of sensors or instrumentation, usually within the same research project
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
2023-07-24
ISO 19115-2 Geographic Information - Metadata - Part 2: Extensions for Imagery and Gridded Data
ISO 19115-2:2009(E)
In-field temperature data Kane'ohe Bay, O'ahu, Hawai'i from 2013 to 2023
2023-07-24
publication
2023-07-24
revision
Marine Biological Laboratory/Woods Hole Oceanographic Institution Library (MBLWHOI DLA)
2023-11-28
publication
https://doi.org/10.26008/1912/bco-dmo.905047.1
Katie Barott
University of Pennsylvania
principalInvestigator
Hollie Putnam
University of Rhode Island
principalInvestigator
Kristen Brown
University of Pennsylvania
principalInvestigator
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
publisher
Cite this dataset as: Barott, K., Putnam, H., Brown, K. T. (2023) In-field temperature data Kane'ohe Bay, O'ahu, Hawai'i from 2013 to 2023. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2023-07-24 [if applicable, indicate subset used]. doi:10.26008/1912/bco-dmo.905047.1 [access date]
Dataset Description: <p>This dataset and other data from this study will be published in the results paper "Divergent bleaching and recovery trajectories in reef-building corals following a decade of successive marine heatwaves." (see pre-print Brown, et al. (2023), doi: 10.1101/2023.07.16.549193).&nbsp;<br />
<br />
All BCO-DMO datasets related to this publication can be found on the page https://www.bco-dmo.org/related-resource/915300.</p> Methods and Sampling: <p>Location:&nbsp;patch reef 13 in Kāne'ohe Bay, O'ahu, Hawai'i (21.4509, -157.7954)&nbsp;</p>
<p>Study site and temperature data</p>
<p>This study was conducted at Patch Reef 13 (PR13) in the southern end of Kāneʻohe Bay, Oʻahu, Hawaiʻi (21.4509, -157.7954). Hourly seawater temperatures were recorded continuously from January 2014 to April 2023 from temperature sensors within the reef at PR13 (1–2.7 m depth) as well as at two adjacent locations within 0.5 km: (Brown et al., 2022) PR12 (21.45096,-157.7972; 1.5 m depth) and (Rodgers and Jokiel, 2005) the National Oceanic and Atmospheric Administration (NOAA) Pacific Marine Environmental Laboratory (PMEL) ‘CRIMP2’ buoy (21.458, -157.798; 0.7 m depth) (Brown et al., 2023 Fig. 1, Fig. S1, Table S1). Mean daily (24 hours) seawater temperatures were calculated and averaged when data sources were overlapping, and used to determine cumulative heat stress (degree heating weeks; DHW) at PR13 following the equations in&nbsp;(Brown et al., 2022)&nbsp;(Brown et al., 2023&nbsp;Fig. 1, Fig. S2, Table S2). The climatic maximum monthly mean (MMM) for Kāneʻohe Bay was determined from seawater temperature data from two monitoring stations on the reefs surrounding the island of Moku o Loʻe (PR1), located approximately 2 km from the study site in the southern region of Kāneʻohe Bay: 1) NOAA’s MOKH1 Station (21.433, -157.790; 1.7 m depth) and 2) the HIMB Point Lab Weather Station&nbsp;(21.433, -157.7863; 1 m depth;&nbsp;((Rodgers and Jokiel, 2005)). Data from 1992–2002 (excluding the 1996 marine heatwave) provided the closest available 10-year data to the time period used by NOAA for determining climatology MMM (1985–1990, 1993), resulting in a climatology MMM for Kāneʻohe Bay of 27.3°C. This MMM was used here to calculate DHW from 2014–2023. Cumulative heat stress at PR13 was compared to PR1 (21.4438, -157.7883; 1 m depth) (Brown et al., 2023&nbsp;Table S1, Fig. S1). DHWs were also calculated from the temperature data recorded at both PR1 and PR13 using the MMM of 27.0°C (Main Hawaiian Island MMM as determined by NOAA and Kāneʻohe Bay climatology MMM from the 1960s&nbsp;(Jokiel and&nbsp;Coles, 1977)), and other recent MMM values used for Kāneʻohe Bay in the literature: 27.7°C&nbsp;(Wall et al., 2021; Jury and Toonen, 2019)&nbsp;and 28.0°C&nbsp;(Jury and Toonen, 2019; Innis et al., 2021)&nbsp;(Brown et al., 2023 Fig. S2).&nbsp;</p>
Funding provided by NSF Division of Ocean Sciences (NSF OCE) Award Number: OCE-2102989 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=2102989
Funding provided by NSF Division of Ocean Sciences (NSF OCE) Award Number: OCE-2103067 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=2103067
completed
Katie Barott
University of Pennsylvania
215-746-6911
433 South University Avenue Leidy Laboratories 326
Philadelphia
PA
19104
USA
kbarott@sas.upenn.edu
pointOfContact
Hollie Putnam
University of Rhode Island
808-554-1462
120 Flagg Rd.
Kingston
RI
02881
USA
hputnam@uri.edu
pointOfContact
Kristen Brown
University of Pennsylvania
433 S University Ave
Philadelphia
PA
19104-4544
USA
ktbrown@sas.upenn.edu
pointOfContact
asNeeded
Dataset Version: 1
Unknown
ISO_DateTime_UTC
Temperature
Date
Time
Site
hour
year
day
month
HOBO pendant logger
theme
None, User defined
ISO_DateTime_UTC
water temperature at measurement depth
date_local
time_local
site
hour_local
year
day of month
month of year
featureType
BCO-DMO Standard Parameters
Onset HOBO Pendant Temperature/Light Data Logger
instrument
BCO-DMO Standard Instruments
CRIMP2
service
Deployment Activity
Kaneohe Bay, Oahu, Hawaii
place
Locations
otherRestrictions
otherRestrictions
Access Constraints: none. Use Constraints: Please follow guidelines at: http://www.bco-dmo.org/terms-use Distribution liability: Under no circumstances shall BCO-DMO be liable for any direct, incidental, special, consequential, indirect, or punitive damages that result from the use of, or the inability to use, the materials in this data submission. If you are dissatisfied with any materials in this data submission your sole and exclusive remedy is to discontinue use.
RAPID: Collaborative Research: Disentangling the effects of heat stress versus bleaching phenotype on coral performance
https://osprey.bco-dmo.org/project/868513
RAPID: Collaborative Research: Disentangling the effects of heat stress versus bleaching phenotype on coral performance
<p><em>NSF Award Abstract:</em><br />
Coral bleaching has become increasingly common on reefs worldwide as rising sea surface temperatures associated with climate change disrupt the coral-algal symbiosis. This dramatic heat stress response turns the normally colorful corals bright white, and yet during these heat stress events not all corals undergo bleaching. This project focuses on assessing the effects of bleaching by comparing pairs of corals side-byside on the reef during an ongoing heat wave, where one has bleached and the other has not, despite experiencing the same temperatures. These coral pairs have been monitored throughout three bleaching events in the past five years, providing a unique resource to address whether corals with consistently different bleaching susceptibilities have the capacity to acclimate in response to disturbances through epigenetic changes, or changes in gene expression not due to change in DNA bases. To address this, the project will characterize the impacts of bleaching or not bleaching on coral physiology, gene expression, and epigenetic patterns using coral pairs in their natural habitat during a marine heatwave. This project also provides research support for graduate student trainees, as well as data and materials for the research and training of undergraduate and high school students. This project will recruit underrepresented minority students from URI and UPenn area high schools and university undergraduates for work on computer analysis of images (benthic and colony photographs, brightfield and confocal micrographs) and sequencing data. It will also support the training of an undergraduate student at the University of Hawaiʻi in coral ecology and physiology, and the development of her senior thesis.</p>
<p>This project will investigate the effects of repeated heat stress events on the performance of Montipora capitata, a dominant reef builder throughout Hawaiʻi. It utilizes the timely context of paired colonies of M. capitata with bleached vs. unbleached histories that have been monitored through two past bleaching events in Hawaiʻi (2015 and 2019) and the currently ongoing 2020 event. This system allows for the unique opportunity to disentangle the consequences of heat stress versus bleaching on coral performance through time, an essential feature of reef resilience. The contrasting physiological and energetic processes these two phenotypes undergo during a heatwave are likely to result in alterations to the cellular environment within the animal that impacts epigenetic transcriptional regulation. These regulatory and energetic changes, if persistent over time, have the potential to alter coral fitness beyond the duration of the heatwave differentially between corals with contrasting bleaching phenotypes. Specifically, the project will: 1) quantify the effect of the 2020 heatwave on coral physiology during bleaching and recovery, 2) generate a corresponding archive of coral tissues and nucleic acids as a resource for future work characterizing how bleaching phenotype alters energetics and non-genetic inheritance, and 3) characterize how bleaching phenotype alters intra-generational inheritance of epigenetic marks (i.e., DNA methylation) and gene expression, and the duration of these marks and expression patterns following heat stress. This project represents an urgent assessment of an ideal system to test the legacy of coral bleaching phenotype on coral fitness. The results of this project will therefore lay the foundation for intra and cross-generational effects of bleaching vs. heat stress, which is essential for understanding coral resilience to climate change.</p>
<p>This award reflects NSF's statutory mission and has been deemed worthy of support through evaluation using the Foundation's intellectual merit and broader impacts review criteria.</p>
Mcap pairs time series
largerWorkCitation
project
eng; USA
oceans
Kaneohe Bay, Oahu, Hawaii
-157.7954
-157.7954
21.4509
21.4509
2013-11-28
2022-11-28
Coral reefs of Kaneohe Bay, Oahu, Hawaii
0
BCO-DMO catalogue of parameters from In-field temperature data Kane'ohe Bay, O'ahu, Hawai'i from 2013 to 2023
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
http://lod.bco-dmo.org/id/dataset-parameter/915465.rdf
Name: ISO_DateTime_UTC
Units: unitless
Description: <p>DateTime (UTC) in ISO 8601 format</p>
http://lod.bco-dmo.org/id/dataset-parameter/915466.rdf
Name: Temperature
Units: degrees C
Description: <p>temperature</p>
http://lod.bco-dmo.org/id/dataset-parameter/915467.rdf
Name: Date
Units: unitless
Description: <p>Date (Pacific/Honolulu UTC-10)</p>
http://lod.bco-dmo.org/id/dataset-parameter/915468.rdf
Name: Time
Units: unitless
Description: <p>Time (Pacific/Honolulu UTC-10)</p>
http://lod.bco-dmo.org/id/dataset-parameter/915469.rdf
Name: Site
Units: unitless
Description: <p>site name</p>
http://lod.bco-dmo.org/id/dataset-parameter/915470.rdf
Name: hour
Units: unitless
Description: <p>hour (Pacific/Honolulu UTC-10)</p>
http://lod.bco-dmo.org/id/dataset-parameter/915471.rdf
Name: year
Units: unitless
Description: <p>year</p>
http://lod.bco-dmo.org/id/dataset-parameter/915472.rdf
Name: day
Units: unitless
Description: <p>day</p>
http://lod.bco-dmo.org/id/dataset-parameter/915473.rdf
Name: month
Units: unitless
Description: <p>month</p>
GB/NERC/BODC > British Oceanographic Data Centre, Natural Environment Research Council, United Kingdom
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
21882870
https://darchive.mblwhoilibrary.org/server/api/core/bitstreams/3e9f082e-7204-4dc2-bef2-7a3f7bbb83f6/content
download
https://doi.org/10.26008/1912/bco-dmo.905047.1
download
onLine
dataset
<p>Location:&nbsp;patch reef 13 in Kāne'ohe Bay, O'ahu, Hawai'i (21.4509, -157.7954)&nbsp;</p>
<p>Study site and temperature data</p>
<p>This study was conducted at Patch Reef 13 (PR13) in the southern end of Kāneʻohe Bay, Oʻahu, Hawaiʻi (21.4509, -157.7954). Hourly seawater temperatures were recorded continuously from January 2014 to April 2023 from temperature sensors within the reef at PR13 (1–2.7 m depth) as well as at two adjacent locations within 0.5 km: (Brown et al., 2022) PR12 (21.45096,-157.7972; 1.5 m depth) and (Rodgers and Jokiel, 2005) the National Oceanic and Atmospheric Administration (NOAA) Pacific Marine Environmental Laboratory (PMEL) ‘CRIMP2’ buoy (21.458, -157.798; 0.7 m depth) (Brown et al., 2023 Fig. 1, Fig. S1, Table S1). Mean daily (24 hours) seawater temperatures were calculated and averaged when data sources were overlapping, and used to determine cumulative heat stress (degree heating weeks; DHW) at PR13 following the equations in&nbsp;(Brown et al., 2022)&nbsp;(Brown et al., 2023&nbsp;Fig. 1, Fig. S2, Table S2). The climatic maximum monthly mean (MMM) for Kāneʻohe Bay was determined from seawater temperature data from two monitoring stations on the reefs surrounding the island of Moku o Loʻe (PR1), located approximately 2 km from the study site in the southern region of Kāneʻohe Bay: 1) NOAA’s MOKH1 Station (21.433, -157.790; 1.7 m depth) and 2) the HIMB Point Lab Weather Station&nbsp;(21.433, -157.7863; 1 m depth;&nbsp;((Rodgers and Jokiel, 2005)). Data from 1992–2002 (excluding the 1996 marine heatwave) provided the closest available 10-year data to the time period used by NOAA for determining climatology MMM (1985–1990, 1993), resulting in a climatology MMM for Kāneʻohe Bay of 27.3°C. This MMM was used here to calculate DHW from 2014–2023. Cumulative heat stress at PR13 was compared to PR1 (21.4438, -157.7883; 1 m depth) (Brown et al., 2023&nbsp;Table S1, Fig. S1). DHWs were also calculated from the temperature data recorded at both PR1 and PR13 using the MMM of 27.0°C (Main Hawaiian Island MMM as determined by NOAA and Kāneʻohe Bay climatology MMM from the 1960s&nbsp;(Jokiel and&nbsp;Coles, 1977)), and other recent MMM values used for Kāneʻohe Bay in the literature: 27.7°C&nbsp;(Wall et al., 2021; Jury and Toonen, 2019)&nbsp;and 28.0°C&nbsp;(Jury and Toonen, 2019; Innis et al., 2021)&nbsp;(Brown et al., 2023 Fig. S2).&nbsp;</p>
Specified by the Principal Investigator(s)
<p>See results publication&nbsp;Brown, et al. (2023) for&nbsp;more detailed information on analysis and results.</p>
Specified by the Principal Investigator(s)
* Table within file "All temperature Kaneohe Bay 2013-2023.csv" was imported into the BCO-DMO data system with values "NA" as missing data values.
** Missing data values are displayed differently based on the file format you download. They are blank in csv files, "NaN" in MatLab files, etc.
* DateTime in UTC added to dataset from the DateTime column provided in local time (Hawaii, UTC-10)
* File "All temperature Kaneohe Bay 2013-2023.csv" added as supplemental file.
* Column names adjusted to conform to BCO-DMO naming conventions designed to support broad re-use by a variety of research tools and scripting languages. [Only numbers, letters, and underscores. Can not start with a number]
* First column in the data table was un-named column of row numbers. This was removed from the imported dataset.
Specified by BCO-DMO Data Managers
asNeeded
7.x-1.1
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
HOBO pendant logger
HOBO pendant logger
PI Supplied Instrument Name: HOBO pendant logger PI Supplied Instrument Description:Seawater temperature: HOBO pendant logger, NOAA Pacific Marine Environmental Laboratory (PMEL) CRIMP2 buoy Instrument Name: Onset HOBO Pendant Temperature/Light Data Logger Instrument Short Name:Onset HOBO Pendant Temp/Light Instrument Description: The Onset HOBO (model numbers UA-002-64 or UA-001-64) is an in-situ instrument for wet or underwater applications. It supports light intensity, soil temperature, temperature, and water temperature. A two-channel logger with 10-bit resolution can record up to approximately 28,000 combined temperature and light measurements with 64K bytes memory. It has a polypropylene housing case. Uses an optical USB to transmit data. A solar radiation shield is used for measurement in sunlight. Temperature measurement range: -20 deg C to 70 deg C (temperature). Light measurement range: 0 to 320,000 lux. Temperature accuracy: +/- 0.53 deg C from 0 deg C to 50 deg C. Light accuracy: Designed for measurement of relative light levels. Water depth rating: 30 m.
Deployment: CRIMP2
CRIMP2
Coral Reef Instrumented Monitoring Platform
Coral Reef Instrumented Monitoring Platform
mooring
Coral Reef Instrumented Monitoring Platform
Coral Reef Instrumented Monitoring Platform
mooring