http://lod.bco-dmo.org/id/dataset/924671
eng; USA
utf8
dataset
Highest level of data collection, from a common set of sensors or instrumentation, usually within the same research project
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
2024-04-09
ISO 19115-2 Geographic Information - Metadata - Part 2: Extensions for Imagery and Gridded Data
ISO 19115-2:2009(E)
Temperature data recorded using HOBO Pendant MX2201 loggers deployed at 14 sites in Tomales Bay and Bodega Harbor during August 2019
2024-04-09
publication
2024-04-09
revision
Marine Biological Laboratory/Woods Hole Oceanographic Institution Library (MBLWHOI DLA)
2024-07-02
publication
https://doi.org/10.26008/1912/bco-dmo.924671.1
John J. Stachowicz
University of California-Davis
principalInvestigator
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
publisher
Cite this dataset as: Stachowicz, J. J. (2024) Temperature data recorded using HOBO Pendant MX2201 loggers deployed at 14 sites in Tomales Bay and Bodega Harbor during August 2019. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2024-04-09 [if applicable, indicate subset used]. doi:10.26008/1912/bco-dmo.924671.1 [access date]
Temperature Data From Tomales Bay and Bodega Harbor Dataset Description: Methods and Sampling: <p>To record water temperature, we deployed HOBO Pendant MX2201 loggers (fastened to PVC pipe) in the area at each of the sites from which we collected genetic samples. The pipe was driven into the sediment until the logger was approximately &lt;15 centimeters above the sediment surface, positioned to rarely be emersed except during low spring tides. We recorded water temperature at 15-minute intervals during a two-week period at all sites from 16 August to 29 August in 2019.</p>
Funding provided by NSF Division of Ocean Sciences (NSF OCE) Award Number: OCE-1829976 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=1829976
completed
John J. Stachowicz
University of California-Davis
530-752-1113
Department of Evolution and Ecology 1 Shields Ave
Davis
CA
95616
USA
jjstachowicz@ucdavis.edu
pointOfContact
asNeeded
Dataset Version: 1
Unknown
site
Latitude
Longitude
ISO_DateTime_PDT
ISO_DateTime_UTC
temp
HOBO Pendant MX2201 loggers (Onset, Bourne MA)
theme
None, User defined
site
latitude
longitude
ISO_DateTime_Local
ISO_DateTime_UTC
water temperature at measurement depth
featureType
BCO-DMO Standard Parameters
Onset HOBO Pendant MX2201 temperature logger
instrument
BCO-DMO Standard Instruments
otherRestrictions
otherRestrictions
Access Constraints: none. Use Constraints: Please follow guidelines at: http://www.bco-dmo.org/terms-use Distribution liability: Under no circumstances shall BCO-DMO be liable for any direct, incidental, special, consequential, indirect, or punitive damages that result from the use of, or the inability to use, the materials in this data submission. If you are dissatisfied with any materials in this data submission your sole and exclusive remedy is to discontinue use.
Using genomics to link traits to ecosystem function in the eelgrass Zostera marina
https://osprey.bco-dmo.org/project/777102
Using genomics to link traits to ecosystem function in the eelgrass Zostera marina
<p><em>NSF Award Abstract:</em><br />
Seagrass ecosystems provide important services to coastal regions, including primary production, carbon storage, nutrient cycling, habitat for fisheries species, and erosion control. At the same time, eelgrass is threatened by direct destruction, pollution, and other human impacts on the environment. We know that genetic diversity in eelgrass enhances seagrass bed growth and persistence, but application of this knowledge to restoration and conservation is limited. This work will guide restoration programs by considering what specific aspects of diversity are important to conservation and restoration of seagrass ecosystems, helping to guide the selection of source material to improve restoration success (which is often low). The project integrates the effects of multiple components of diversity and clarifies the extent to which genetic and ecological uniqueness can predict ecosystem functions.</p>
<p>Intellectual Merit: Genetic diversity as measured by the number of genetically distinct individuals (genets) in an assemblage influences critical ecosystem functions in a wide range of ecosystems. Functional diversity, the presence of key traits, or population flexibility to respond to environmental change are all potential mechanisms underlying these patterns, but distinguishing among them requires a clear link between genetic diversity and the phenotypes present in an assemblage. The investigators, and others, have previously demonstrated that genet diversity in eelgrass (Zostera marina) increases stand productivity, animal community diversity, and resilience to environmental change. These genet diversity effects are associated with increases in genetically determined trait diversity. Predicting trait diversity without having to measure traits of every genet remains a major barrier to wider application of functional diversity approaches in restoration and management. In this project, the investigators assess the association between Single Nucleotide Polymorphisms (SNPs) across the genome and performance-related traits that we will measure at the individual, population, and seascape-scale. They also assess environmental correlates of trait differentiation from field sampling. Finally, the research team will compare the predictive power of genomic SNP diversity versus other metrics of intraspecific diversity for the functioning (productivity, invertebrate abundance) of field planted eelgrass assemblages. If genomic variation can reliably be used to predict functional traits, then the value of genomic sequencing efforts for informing management will be greatly enhanced. Broader Impacts: Seagrass restoration and mitigation is currently of major interest in California and elsewhere and the project results will inform current initiatives regarding eelgrass management in California through the state's Ocean Protection Council. In addition to recruiting individual students from diverse backgrounds to work on the project, the project broadens participation of students in STEM fields through its partnership with three existing outreach/training programs at UC Davis.</p>
<p>This award reflects NSF's statutory mission and has been deemed worthy of support through evaluation using the Foundation's intellectual merit and broader impacts review criteria.</p>
ZosteraEcoGenomics
largerWorkCitation
project
eng; USA
oceans
-123.06
-122.846
38.105
38.3334
2019-08-16
2019-08-29
In Zostera marina beds worldwide, including western and eastern margins of both the Atlantic and Pacific Oceans. Project centered in Bodega Bay, CA 38.31 N; 123.059 W
0
BCO-DMO catalogue of parameters from Temperature data recorded using HOBO Pendant MX2201 loggers deployed at 14 sites in Tomales Bay and Bodega Harbor during August 2019
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
http://lod.bco-dmo.org/id/dataset-parameter/924699.rdf
Name: site
Units: unitless
Description: <p>Name of the sampling site</p>
http://lod.bco-dmo.org/id/dataset-parameter/924700.rdf
Name: Latitude
Units: decimal degrees
Description: <p>Latitude of the sampling site</p>
http://lod.bco-dmo.org/id/dataset-parameter/924701.rdf
Name: Longitude
Units: decimal degrees
Description: <p>Longitude of the sampling site</p>
http://lod.bco-dmo.org/id/dataset-parameter/924702.rdf
Name: ISO_DateTime_PDT
Units: unitless
Description: <p>Date and time (PDT) in ISO 8601 format</p>
http://lod.bco-dmo.org/id/dataset-parameter/924703.rdf
Name: ISO_DateTime_UTC
Units: unitless
Description: <p>Date and time (UTC) in ISO 8601 format</p>
http://lod.bco-dmo.org/id/dataset-parameter/924704.rdf
Name: temp
Units: degrees Celsius
Description: <p>Temperature</p>
GB/NERC/BODC > British Oceanographic Data Centre, Natural Environment Research Council, United Kingdom
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
1381829
https://darchive.mblwhoilibrary.org/server/api/core/bitstreams/71b85942-4467-4330-b991-5e8b82b9f1ce/content
download
https://doi.org/10.26008/1912/bco-dmo.924671.1
download
onLine
dataset
<p>To record water temperature, we deployed HOBO Pendant MX2201 loggers (fastened to PVC pipe) in the area at each of the sites from which we collected genetic samples. The pipe was driven into the sediment until the logger was approximately &lt;15 centimeters above the sediment surface, positioned to rarely be emersed except during low spring tides. We recorded water temperature at 15-minute intervals during a two-week period at all sites from 16 August to 29 August in 2019.</p>
Specified by the Principal Investigator(s)
- Added column "Site" to the "Metadata" sheet of original file "temperature_data_shared_dates.xlsx" to create a site list.
- Imported both sheets of original file "temperature_data_shared_dates.xlsx" into the BCO-DMO system.
- Used 'Unpivot' processor to create a column for Site name.
- Joined the site latitude and longitude from the site list to the primary data file.
- Corrected typo in one site name (changed "Beachg" to "Beach" in "Doran Beach").
- Converted the local date/time field to ISO8601 format.
- Created a second column for date/time in UTC time zone.
- Sorted data by site name, then date/time.
- Saved the final file as "924671_v1_tomales_bodega_temp.csv".
Specified by BCO-DMO Data Managers
asNeeded
7.x-1.1
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
HOBO Pendant MX2201 loggers (Onset, Bourne MA)
HOBO Pendant MX2201 loggers (Onset, Bourne MA)
PI Supplied Instrument Name: HOBO Pendant MX2201 loggers (Onset, Bourne MA) Instrument Name: Onset HOBO Pendant MX2201 temperature logger Instrument Short Name:Onset HOBO Pendant MX2201 Instrument Description: The Onset HOBO MX2201 is an in-situ instrument for wet or underwater applications. It supports soil temperature, temperature, and water temperature. A one-channel logger that records up to approximately 96,000 measurements or internal logger events with 8K bytes memory. It has a polypropylene housing case. Uses Bluetooth to transmit data. Can be used with a solar radiation shield. Measurement range: -20 deg C to 70 deg C. Accuracy: +/- 0.50 deg C from 0 deg C to 50 deg C. Water depth rating: 30.5 m