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            <gmx:Anchor xlink:href="http://lod.bco-dmo.org/id/dataset/943994.rdf" xlink:actuate="onRequest">Houston Galveston Bay Carbonate from the Hurricane Harvey Texas Lagoons project</gmx:Anchor>
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            <gco:CharacterString>Cite this dataset as: Liu, H., Hu, X., Dias, L. M. (2024) Houston Galveston Bay Carbonate. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2024-11-19 [if applicable, indicate subset used]. http://lod.bco-dmo.org/id/dataset/943994 [access date]</gco:CharacterString>
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        <gco:CharacterString>Methods and Sampling: &amp;lt;p&amp;gt;&amp;lt;strong&amp;gt;Field Sampling&amp;lt;/strong&amp;gt;&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;Galveston Bay is a semi-enclosed microtidal estuary located in the NWGOM (Montagna et al., 2013). With an average water depth of 3 m and a surface area covering 1,554 km², Galveston Bay is the seventh-largest estuary in the U.S. and the second-largest estuary on the Texas coast (Bass et al., 2018; Morse et al., 1993; Solis &amp;amp;amp; Powell, 1999). Galveston Bay receives freshwater from the Trinity River, San Jacinto River, Clear Creek, and smaller bayous and creeks, with the Trinity River providing 70% of the freshwater entering the Bay (Bass et al., 2018; Dellapenna et al., 2020; Morse et al., 1993; Solis &amp;amp;amp; Powell, 1999). The Bolivar Peninsula and Galveston Island separate Galveston Bay from the GOM, with the exchange of water between the Bay and the GOM occurring through Bolivar Roads, i.e., the mouth of the Bay (Glass et al., 2008; Morse et al., 1993).&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;Monthly cruises were conducted between October 2017 and September 2018 onboard the R/V Trident. Timing of the study allowed for the examination of the factors regulating CO₂ flux over the course of a year following Hurricane Harvey in late August 2017. Although the study began more than 45 days (the residence time of the Bay) after Harvey, salinity recovery of the Bay was likely still ongoing in the inner and middle sections of the Bay (Du &amp;amp;amp; Park, 2019; Du et al., 2019).&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;During each monthly survey, a transect was run between five water sampling stations, extending northwest from the Bay mouth (Station 1) opening to the Five Mile Marker on the Houston Ship Channel (Station 5). One offshore cruise in the NWGOM outside Galveston Bay was conducted in October 2018. At each station, surface (~0.5 m below water surface) and bottom water (~0.5 m above the sediment) samples for carbonate analyses were collected. A van Dorn sampler was used to collect unfiltered surface and bottom water into 250 mL borosilicate glass bottles for total alkalinity (TA), dissolved inorganic carbon (DIC), and pH analyses. A total of 100 μL saturated HgCl₂ was added to each water sample to cease biological activity, and bottle stoppers were replaced following the application of Apiezon® grease and secured with rubber bands and hose clamps. The samples were stored at 4 °C in the dark until analyses, usually within 2–3 weeks of sample collection. Surface and bottom unpreserved water samples were collected in 125 mL polypropylene bottles for Ca²⁺ analysis.&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;&amp;lt;strong&amp;gt;Discrete Sample Analyses&amp;lt;/strong&amp;gt;&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;Water samples collected at the surface and bottom at each station were analyzed for DIC, TA, pH, and salinity (Dickson et al., 2003; Bass et al., 2018). DIC was analyzed by acidifying 0.5 mL water samples with 0.5 mL 10% H₃PO₄ using a 2.5 mL syringe pump on an AS-C3 DIC analyzer (Apollo SciTech Inc.) with a precision of ±0.1%. TA was analyzed at 22.0 ± 0.1 °C using Gran titration of a 25 mL water sample with 0.1 M HCl solution (in 0.5 M NaCl) on an AS-Alk2 alkalinity titrator (Apollo SciTech Inc.), with a precision of ±0.1%. Precisions were estimated based on randomly collected duplicate samples. Reference Material (RM) produced in the lab of Andrew Dickson at Scripps was used in both TA and DIC analysis to ensure data quality (Dickson et al., 2003).&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;A spectrophotometric method with a precision of ±0.0004 and purified m-cresol purple (mCP) obtained from Dr. Robert Byrne’s lab (University of South Florida) (Liu et al., 2011) was used for pH (on the total scale) analysis (Carter et al., 2013). Prior to each sample analysis, a calibrated Orion™ Ross™ glass electrode was used to adjust the indicator to pH 7.92 ± 0.01. A 10 cm water-jacketed absorbance cell for pH measurements (Carter et al., 2013) was kept at 25 ± 0.01 °C. Consecutive runs were done for each sample whereby two volumes (30 μL and 60 μL) of mCP were added to correct the dye effect (Clayton &amp;amp;amp; Byrne, 1993). Equations from Liu et al. (2011) were used when salinity was greater than 20 for the entirety of a sampling trip, and equations from Douglas and Byrne (2017), which allow for a wider salinity range (0–40 vs. 20–40) (Douglas &amp;amp;amp; Byrne, 2017), were used when salinity was less than 20 for an entire sampling trip for pH calculations. Calculated pH values (on the total scale) were converted to in situ temperature using the program CO2SYS with DIC as the other input parameter.&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;Salinity was measured with a benchtop salinometer (Orion Star™ A12, Thermo Scientific), which was calibrated using Milli-Q water and known salinity CRM seawater before each sample analysis. Calcium ([Ca²⁺]) concentration was measured using automatic potentiometric titration with ethylene glycol tetraacetic acid (EGTA), with a precision of ±0.2% (Kanamori &amp;amp;amp; Ikegami, 1980). A Metrohm® Titrando calcium-selective electrode on a titration system (Metrohm Titrando 888) was used to detect the endpoint.&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;&amp;lt;strong&amp;gt;Meteorological Data&amp;lt;/strong&amp;gt;&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;United States Geological Survey (USGS, 2021) streamgages for the Trinity River (gage #08066500) and San Jacinto River, east fork (SJE; gage #08070200) and west fork (SJW; gage #08068000), were used to obtain freshwater discharge. These stations were identified as the closest gages to the mouths of the rivers having complete discharge data for the study period. Discharges of less than or equal to 45 days (residence time of the Bay) prior to flux estimates were utilized (Morse et al., 1993; Solis &amp;amp;amp; Powell, 1999). The Texas Commission on Environmental Quality (TCEQ, 2022) performs routine water quality monitoring, and TCEQ water sampling stations were used for river endmember values from the San Jacinto (average of west fork station #11243 and east fork station #11238) and Trinity (station #10896) rivers. River endmember DIC was calculated from TA and pH measurements using K₁ and K₂ constants from Millero (2010) and pH values on the NBS scale. Seasonally weighted averages were calculated by summing the TA or DIC concentration multiplied by daily discharge values for all river measurements of that season and dividing by the sum of all discharge values for all river measurements of that season (using meteorological seasons).&amp;lt;/p&amp;gt;</gco:CharacterString>
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        <gmx:Anchor xlink:href="http://lod.bco-dmo.org/id/award/783255.rdf" xlink:title="OCE-1760006" xlink:actuate="onRequest">Funding provided by NSF Division of Ocean Sciences (NSF OCE) Award Number: OCE-1760006 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=1760006</gmx:Anchor>
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                <gco:CharacterString>&amp;lt;p&amp;gt;&amp;lt;strong&amp;gt;Field Sampling&amp;lt;/strong&amp;gt;&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;Galveston Bay is a semi-enclosed microtidal estuary located in the NWGOM (Montagna et al., 2013). With an average water depth of 3 m and a surface area covering 1,554 km², Galveston Bay is the seventh-largest estuary in the U.S. and the second-largest estuary on the Texas coast (Bass et al., 2018; Morse et al., 1993; Solis &amp;amp;amp; Powell, 1999). Galveston Bay receives freshwater from the Trinity River, San Jacinto River, Clear Creek, and smaller bayous and creeks, with the Trinity River providing 70% of the freshwater entering the Bay (Bass et al., 2018; Dellapenna et al., 2020; Morse et al., 1993; Solis &amp;amp;amp; Powell, 1999). The Bolivar Peninsula and Galveston Island separate Galveston Bay from the GOM, with the exchange of water between the Bay and the GOM occurring through Bolivar Roads, i.e., the mouth of the Bay (Glass et al., 2008; Morse et al., 1993).&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;Monthly cruises were conducted between October 2017 and September 2018 onboard the R/V Trident. Timing of the study allowed for the examination of the factors regulating CO₂ flux over the course of a year following Hurricane Harvey in late August 2017. Although the study began more than 45 days (the residence time of the Bay) after Harvey, salinity recovery of the Bay was likely still ongoing in the inner and middle sections of the Bay (Du &amp;amp;amp; Park, 2019; Du et al., 2019).&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;During each monthly survey, a transect was run between five water sampling stations, extending northwest from the Bay mouth (Station 1) opening to the Five Mile Marker on the Houston Ship Channel (Station 5). One offshore cruise in the NWGOM outside Galveston Bay was conducted in October 2018. At each station, surface (~0.5 m below water surface) and bottom water (~0.5 m above the sediment) samples for carbonate analyses were collected. A van Dorn sampler was used to collect unfiltered surface and bottom water into 250 mL borosilicate glass bottles for total alkalinity (TA), dissolved inorganic carbon (DIC), and pH analyses. A total of 100 μL saturated HgCl₂ was added to each water sample to cease biological activity, and bottle stoppers were replaced following the application of Apiezon® grease and secured with rubber bands and hose clamps. The samples were stored at 4 °C in the dark until analyses, usually within 2–3 weeks of sample collection. Surface and bottom unpreserved water samples were collected in 125 mL polypropylene bottles for Ca²⁺ analysis.&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;&amp;lt;strong&amp;gt;Discrete Sample Analyses&amp;lt;/strong&amp;gt;&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;Water samples collected at the surface and bottom at each station were analyzed for DIC, TA, pH, and salinity (Dickson et al., 2003; Bass et al., 2018). DIC was analyzed by acidifying 0.5 mL water samples with 0.5 mL 10% H₃PO₄ using a 2.5 mL syringe pump on an AS-C3 DIC analyzer (Apollo SciTech Inc.) with a precision of ±0.1%. TA was analyzed at 22.0 ± 0.1 °C using Gran titration of a 25 mL water sample with 0.1 M HCl solution (in 0.5 M NaCl) on an AS-Alk2 alkalinity titrator (Apollo SciTech Inc.), with a precision of ±0.1%. Precisions were estimated based on randomly collected duplicate samples. Reference Material (RM) produced in the lab of Andrew Dickson at Scripps was used in both TA and DIC analysis to ensure data quality (Dickson et al., 2003).&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;A spectrophotometric method with a precision of ±0.0004 and purified m-cresol purple (mCP) obtained from Dr. Robert Byrne’s lab (University of South Florida) (Liu et al., 2011) was used for pH (on the total scale) analysis (Carter et al., 2013). Prior to each sample analysis, a calibrated Orion™ Ross™ glass electrode was used to adjust the indicator to pH 7.92 ± 0.01. A 10 cm water-jacketed absorbance cell for pH measurements (Carter et al., 2013) was kept at 25 ± 0.01 °C. Consecutive runs were done for each sample whereby two volumes (30 μL and 60 μL) of mCP were added to correct the dye effect (Clayton &amp;amp;amp; Byrne, 1993). Equations from Liu et al. (2011) were used when salinity was greater than 20 for the entirety of a sampling trip, and equations from Douglas and Byrne (2017), which allow for a wider salinity range (0–40 vs. 20–40) (Douglas &amp;amp;amp; Byrne, 2017), were used when salinity was less than 20 for an entire sampling trip for pH calculations. Calculated pH values (on the total scale) were converted to in situ temperature using the program CO2SYS with DIC as the other input parameter.&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;Salinity was measured with a benchtop salinometer (Orion Star™ A12, Thermo Scientific), which was calibrated using Milli-Q water and known salinity CRM seawater before each sample analysis. Calcium ([Ca²⁺]) concentration was measured using automatic potentiometric titration with ethylene glycol tetraacetic acid (EGTA), with a precision of ±0.2% (Kanamori &amp;amp;amp; Ikegami, 1980). A Metrohm® Titrando calcium-selective electrode on a titration system (Metrohm Titrando 888) was used to detect the endpoint.&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;&amp;lt;strong&amp;gt;Meteorological Data&amp;lt;/strong&amp;gt;&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;United States Geological Survey (USGS, 2021) streamgages for the Trinity River (gage #08066500) and San Jacinto River, east fork (SJE; gage #08070200) and west fork (SJW; gage #08068000), were used to obtain freshwater discharge. These stations were identified as the closest gages to the mouths of the rivers having complete discharge data for the study period. Discharges of less than or equal to 45 days (residence time of the Bay) prior to flux estimates were utilized (Morse et al., 1993; Solis &amp;amp;amp; Powell, 1999). The Texas Commission on Environmental Quality (TCEQ, 2022) performs routine water quality monitoring, and TCEQ water sampling stations were used for river endmember values from the San Jacinto (average of west fork station #11243 and east fork station #11238) and Trinity (station #10896) rivers. River endmember DIC was calculated from TA and pH measurements using K₁ and K₂ constants from Millero (2010) and pH values on the NBS scale. Seasonally weighted averages were calculated by summing the TA or DIC concentration multiplied by daily discharge values for all river measurements of that season and dividing by the sum of all discharge values for all river measurements of that season (using meteorological seasons).&amp;lt;/p&amp;gt;</gco:CharacterString>
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                <gco:CharacterString>&amp;lt;p&amp;gt;&amp;lt;strong&amp;gt;Carbonate Speciation and Saturation State Calculations&amp;lt;/strong&amp;gt;&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;Carbonate speciation was calculated under field conditions (temperature and pressure) using the Excel® version of the CO2SYS program (Lewis &amp;amp;amp; Wallace, 1998) based on DIC and lab-measured pH (at 25 °C) from discrete samples. Carbonic acid dissociation constants (K1, K2) from Millero (2010), the bisulfate dissociation constant from Dickson (1990), the dissociation constant of HF (KF) from Dickson and Riley (1979), and total boron concentration from Uppström (1974) were used.&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;The CO2SYS output for carbonate saturation state with respect to aragonite (ΩAr, CO2SYS) was corrected using the measured Ca²⁺ concentration, which exhibited a near-linear relationship with salinity (R² = 0.96). This correction was necessary for the estuary due to the non-zero calcium concentration of the riverine endmember. The corrected aragonite saturation state (ΩAr) was calculated as:&amp;lt;/p&amp;gt;

&amp;lt;p class=&amp;quot;rtecenter&amp;quot;&amp;gt;Corrected ΩAr = (ΩAr, CO2SYS) × ([Ca²⁺ measured] / [Ca²⁺ theoretical])&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;Where:&amp;lt;/p&amp;gt;

&amp;lt;ul&amp;gt;
&amp;lt;li&amp;gt;[Ca²⁺ measured] is the calcium concentration measured directly.&amp;lt;/li&amp;gt;
&amp;lt;li&amp;gt;[Ca²⁺ theoretical] is the theoretical calcium concentration based on salinity as calculated in the CO2SYS program.&amp;lt;/li&amp;gt;
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                  <gco:CharacterString>- Units and special characters removed from parameter names
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- The original submitted primary data file was an Excel file containing a &amp;quot;Metadata&amp;quot; tab and &amp;quot;Data&amp;quot; tab; the &amp;quot;Data&amp;quot; tab is served in this dataset as the primary data table and the content from the &amp;quot;Metadata&amp;quot; tab informs the parameter details of this dataset</gco:CharacterString>
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            <gco:CharacterString>PI Supplied Instrument Name: AS-Alk2 alkalinity titrator (Apollo SciTech Inc.) PI Supplied Instrument Description:Total Alkalinity measurements were made with an AS-Alk2 alkalinity titrator (Apollo SciTech Inc.) and analyzed at 22.0+/-0.1 deg.C using gran titration of a 25 mL water sample with 0.1 M Hal solution (in 0.5 M NaCl), with a precision of +/-0.1%. Instrument Name: Apollo SciTech AS-ALK2 total alkalinity titrator Instrument Short Name:Apollo SciTech AS-ALK2   Instrument Description: An automated acid-base titrator for use in aquatic carbon dioxide parameter analysis. The titrator provides standardisation and sample analysis, using the Gran titration procedure for alkalinity determination of seawater and brackish waters. It is designed for both shipboard and land based laboratory use. The precision of the instrument is 0.1 percent or higher, and sample volumes may range from 10-25 ml. Titration takes approximately 8 minutes per sample, and the repeatability is within plus or minus 1-2 micromoles per kg.</gco:CharacterString>
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            <gco:CharacterString>PI Supplied Instrument Name: AS-C3 DIC analyzer (Apollo SciTech Inc.) PI Supplied Instrument Description:Dissolved Inorganic Carbon (DIC) measurements were performed with an AS-C3 DIC analyzer (Apollo SciTech Inc.) and analyzed by acidifying 0.5 mL water samples with 0.5 mL 10% H3PO4 using a 2.5 mL syringe pump, with a precision of +/-0.1%.  Instrument Name: Apollo SciTech AS-C3 Dissolved Inorganic Carbon (DIC) analyzer Instrument Short Name:Apollo SciTech AS-C3   Instrument Description: A Dissolved Inorganic Carbon (DIC) analyzer, for use in aquatic carbon dioxide parameter analysis of coastal waters, sediment pore-waters, and time-series incubation samples. The analyzer consists of a solid state infrared CO2 detector, a mass-flow controller, and a digital pump for transferring accurate amounts of reagent and sample. The analyzer uses an electronic cooling system to keep the reactor temperature below 3 degrees Celsius, and a Nafion dry tube to reduce the water vapour and keep the analyzer drift-free and maintenance-free for longer. The analyzer can handle sample volumes from 0.1 - 1.5 milliliters, however the best results are obtained from sample volumes between 0.5 - 1 milliliters. It takes approximately 3 minutes per analysis, and measurement precision is plus or minus 2 micromoles per kilogram or higher for surface seawater. It is designed for both land based and shipboard laboratory use.</gco:CharacterString>
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