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            <gmx:Anchor xlink:href="http://lod.bco-dmo.org/id/dataset/944425.rdf" xlink:actuate="onRequest">Houston Galveston Bay CO2 Flux from the Hurricane Harvey Texas Lagoons project</gmx:Anchor>
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            <gco:CharacterString>Cite this dataset as: Hu, X., Dias, L. M., Liu, H. (2024) Houston Galveston Bay CO2 Flux. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2024-11-25 [if applicable, indicate subset used]. http://lod.bco-dmo.org/id/dataset/944425 [access date]</gco:CharacterString>
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        <gco:CharacterString>Methods and Sampling: &amp;lt;p&amp;gt;&amp;amp;nbsp;&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;&amp;lt;strong&amp;gt;Field Sampling&amp;lt;/strong&amp;gt;&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;Galveston Bay is a semi-enclosed microtidal estuary located in the northwestern Gulf of Mexico (nwGOM) (Montagna, Palmer, &amp;amp;amp; Pollack, 2013). With an average water depth of 3 m and a surface area covering 1554 km², Galveston Bay is the seventh largest estuary in the U.S. and the second largest estuary on the Texas coast (Bass et al., 2018; Morse, Presley, Taylor, Benoit, Santschi, 1993; Solis &amp;amp;amp; Powell, 1999). Galveston Bay receives freshwater from the Trinity River, San Jacinto River, Clear Creek, and smaller bayous and creeks, with the Trinity River providing 70% of the freshwater entering the Bay (Bass et al., 2018; Solis &amp;amp;amp; Powell, 1999). The Bolivar Peninsula and Galveston Island separate Galveston Bay from the Gulf of Mexico (GOM), with exchange of water between the Bay and the GOM occurring through Bolivar Roads, i.e., the mouth of the Bay (Glass, Rooker, Kraus, &amp;amp;amp; Holt, 2008).&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;Monthly cruises were conducted between October 2017 and September 2018 on board the R/V Trident. The timing of the study allowed for examination of the factors regulating CO₂ flux over the course of a year following Hurricane Harvey in late August of 2017. Although the study began more than 45 days after Harvey (the residence time of the Bay), salinity recovery of the Bay was likely still ongoing in the inner and middle sections of the Bay (Du &amp;amp;amp; Park, 2019; Du, Park, Dellapenna, &amp;amp;amp; Clay, 2019).&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;During each monthly survey, a transect was run between five water sampling stations, extending northwest from the Bay mouth (Station 1) opening to the Five Mile Marker on the Houston Ship Channel (Station 5). One offshore cruise in the nwGOM outside Galveston Bay was conducted in October of 2018. Underway pCO₂ measurements were taken along a northwesterly transect extending from stations 1 through 5. A SUPER-CO₂ System equipped with a LI-COR® LI-840A infrared gas analyzer was used to collect both water and air xCO₂ after drying through a Peltier thermoelectric device. The xCO₂ data, after removing residual water vapor (Honkanen et al., 2021), were converted to pCO₂ at sea surface temperature assuming 100% water vapor pressure (Jiang, Cai, Wanninkhof, Wang, &amp;amp;amp; Lu, 2008). Underway seawater was taken from a steel pipe attached to the side of the research vessel, as it did not have a dedicated water intake system, and a diaphragm water pump was used to feed water to the equilibrator. In situ sea surface temperature and salinity were measured with a SeaBird Scientific SBE45® Thermosalinograph mounted parallel to the equilibrator of the SUPER-CO₂ System. Prior to and following each sampling trip, the SUPER-CO₂ System was calibrated using standards of known CO₂ concentrations (273.3, 774.3, and 1468.7 ppm).&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;To calculate the pCO₂ of seawater and air from measurements, the measured mole fraction of CO₂ in seawater (xCO₂, water) and measured equilibrator barometric pressure and xH₂O were first used to calculate xCO₂ in dry air (xCO₂, air). This xCO₂, air was then converted to pCO₂ of equilibration (pCO₂, eq) using measured temperature of equilibration (Teq) and water vapor pressure of equilibration, which was calculated from salinity and Teq according to methods outlined by Weiss and Price (1980). Next, sea surface temperature (SST) and Teq were used to convert pCO₂, eq to pCO₂, water according to Jiang et al. (2008). For pCO₂, air, xCO₂, air was converted to pCO₂, air using water vapor pressure at SST and salinity, assuming 100% humidity (Weiss &amp;amp;amp; Price, 1980).&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;&amp;lt;strong&amp;gt;Meteorological Data&amp;lt;/strong&amp;gt;&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;Three National Oceanic and Atmospheric Administration (NOAA) buoys from throughout Galveston Bay (NOAA, 2022) provided six-minute interval averages of continuous wind speed data. The average wind speed for all three buoys during sampling times was calculated and applied to the timing of sampling in Galveston Bay. Prior to calculations, wind speeds were converted to a height of 10 m (u₁₀) using the wind profile power law (Hsu, Meindl, &amp;amp;amp; Gilhousen, 1994):&amp;lt;/p&amp;gt;

&amp;lt;p class=&amp;quot;rtecenter&amp;quot;&amp;gt;u₁/u₂ = (z₁/z₂)^P&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;In this calculation, u₂ is wind speed at height z₂ = 10 m, u₁ is the collected wind speed data at height z₁, and the exponent P (0.11) around the GOM area is extracted by Hsu et al. (1994).&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;United States Geological Survey (USGS) stream gages for the Trinity River (gage #08066500) and San Jacinto River, east fork (SJE; gage #08070200) and west fork (SJW; gage #08068000) were used to obtain freshwater discharge (USGS, 2021). These stations were identified as the closest gages to the mouths of the rivers having complete discharge data for the period of study. Discharges of less than or equal to 45 days (residence time of the Bay) prior to flux estimates were utilized (Solis &amp;amp;amp; Powell, 1999). The Texas Commission on Environmental Quality (TCEQ) performs routine water quality monitoring, and TCEQ water sampling stations were used for river endmember values from the San Jacinto (average of west fork station #11243 and east fork station #11238) and Trinity (station #10896) rivers (TCEQ, 2022). River endmember DIC was calculated from TA and pH measurements using K₁ and K₂ constants from Millero (2010), and pH value on the NBS scale. Seasonally weighted averages were calculated by summing the TA or DIC concentration multiplied by daily discharge values for all river measurements of that season and dividing by the sum of all discharge values for all river measurements of that season (using meteorological seasons).&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;&amp;lt;strong&amp;gt;Historical Data&amp;lt;/strong&amp;gt;&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;Results from this study were compared to historical data for Galveston Bay obtained from the Surface Ocean CO₂ Atlas (SOCAT) database (Bakker et al., 2016), which provided fCO₂, water and xCO₂, air values, along with surface seawater salinity, temperature, and depth, with observations from 2006 and 2010 through 2016, primarily during the month of September. SOCAT transects followed a similar route to our study transect, beginning near station 4 and continuing outward into the GOM, with a side transect through the Galveston Channel, which separates Pelican Island from Galveston Island. fCO₂ values were converted to pCO₂ using the R package seacarb (Gattuso et al., 2022). SOCAT data were analyzed independently from the results of this study. As done before with ship data, SOCAT xCO₂, air was converted to pCO₂, air by accounting for water vapor pressure based on SST and SSS, assuming 100% humidity (Borges et al., 2004).&amp;lt;/p&amp;gt;</gco:CharacterString>
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        <gmx:Anchor xlink:href="http://lod.bco-dmo.org/id/award/783255.rdf" xlink:title="OCE-1760006" xlink:actuate="onRequest">Funding provided by NSF Division of Ocean Sciences (NSF OCE) Award Number: OCE-1760006 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=1760006</gmx:Anchor>
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                <gco:CharacterString>&amp;lt;p&amp;gt;&amp;amp;nbsp;&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;&amp;lt;strong&amp;gt;Field Sampling&amp;lt;/strong&amp;gt;&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;Galveston Bay is a semi-enclosed microtidal estuary located in the northwestern Gulf of Mexico (nwGOM) (Montagna, Palmer, &amp;amp;amp; Pollack, 2013). With an average water depth of 3 m and a surface area covering 1554 km², Galveston Bay is the seventh largest estuary in the U.S. and the second largest estuary on the Texas coast (Bass et al., 2018; Morse, Presley, Taylor, Benoit, Santschi, 1993; Solis &amp;amp;amp; Powell, 1999). Galveston Bay receives freshwater from the Trinity River, San Jacinto River, Clear Creek, and smaller bayous and creeks, with the Trinity River providing 70% of the freshwater entering the Bay (Bass et al., 2018; Solis &amp;amp;amp; Powell, 1999). The Bolivar Peninsula and Galveston Island separate Galveston Bay from the Gulf of Mexico (GOM), with exchange of water between the Bay and the GOM occurring through Bolivar Roads, i.e., the mouth of the Bay (Glass, Rooker, Kraus, &amp;amp;amp; Holt, 2008).&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;Monthly cruises were conducted between October 2017 and September 2018 on board the R/V Trident. The timing of the study allowed for examination of the factors regulating CO₂ flux over the course of a year following Hurricane Harvey in late August of 2017. Although the study began more than 45 days after Harvey (the residence time of the Bay), salinity recovery of the Bay was likely still ongoing in the inner and middle sections of the Bay (Du &amp;amp;amp; Park, 2019; Du, Park, Dellapenna, &amp;amp;amp; Clay, 2019).&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;During each monthly survey, a transect was run between five water sampling stations, extending northwest from the Bay mouth (Station 1) opening to the Five Mile Marker on the Houston Ship Channel (Station 5). One offshore cruise in the nwGOM outside Galveston Bay was conducted in October of 2018. Underway pCO₂ measurements were taken along a northwesterly transect extending from stations 1 through 5. A SUPER-CO₂ System equipped with a LI-COR® LI-840A infrared gas analyzer was used to collect both water and air xCO₂ after drying through a Peltier thermoelectric device. The xCO₂ data, after removing residual water vapor (Honkanen et al., 2021), were converted to pCO₂ at sea surface temperature assuming 100% water vapor pressure (Jiang, Cai, Wanninkhof, Wang, &amp;amp;amp; Lu, 2008). Underway seawater was taken from a steel pipe attached to the side of the research vessel, as it did not have a dedicated water intake system, and a diaphragm water pump was used to feed water to the equilibrator. In situ sea surface temperature and salinity were measured with a SeaBird Scientific SBE45® Thermosalinograph mounted parallel to the equilibrator of the SUPER-CO₂ System. Prior to and following each sampling trip, the SUPER-CO₂ System was calibrated using standards of known CO₂ concentrations (273.3, 774.3, and 1468.7 ppm).&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;To calculate the pCO₂ of seawater and air from measurements, the measured mole fraction of CO₂ in seawater (xCO₂, water) and measured equilibrator barometric pressure and xH₂O were first used to calculate xCO₂ in dry air (xCO₂, air). This xCO₂, air was then converted to pCO₂ of equilibration (pCO₂, eq) using measured temperature of equilibration (Teq) and water vapor pressure of equilibration, which was calculated from salinity and Teq according to methods outlined by Weiss and Price (1980). Next, sea surface temperature (SST) and Teq were used to convert pCO₂, eq to pCO₂, water according to Jiang et al. (2008). For pCO₂, air, xCO₂, air was converted to pCO₂, air using water vapor pressure at SST and salinity, assuming 100% humidity (Weiss &amp;amp;amp; Price, 1980).&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;&amp;lt;strong&amp;gt;Meteorological Data&amp;lt;/strong&amp;gt;&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;Three National Oceanic and Atmospheric Administration (NOAA) buoys from throughout Galveston Bay (NOAA, 2022) provided six-minute interval averages of continuous wind speed data. The average wind speed for all three buoys during sampling times was calculated and applied to the timing of sampling in Galveston Bay. Prior to calculations, wind speeds were converted to a height of 10 m (u₁₀) using the wind profile power law (Hsu, Meindl, &amp;amp;amp; Gilhousen, 1994):&amp;lt;/p&amp;gt;

&amp;lt;p class=&amp;quot;rtecenter&amp;quot;&amp;gt;u₁/u₂ = (z₁/z₂)^P&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;In this calculation, u₂ is wind speed at height z₂ = 10 m, u₁ is the collected wind speed data at height z₁, and the exponent P (0.11) around the GOM area is extracted by Hsu et al. (1994).&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;United States Geological Survey (USGS) stream gages for the Trinity River (gage #08066500) and San Jacinto River, east fork (SJE; gage #08070200) and west fork (SJW; gage #08068000) were used to obtain freshwater discharge (USGS, 2021). These stations were identified as the closest gages to the mouths of the rivers having complete discharge data for the period of study. Discharges of less than or equal to 45 days (residence time of the Bay) prior to flux estimates were utilized (Solis &amp;amp;amp; Powell, 1999). The Texas Commission on Environmental Quality (TCEQ) performs routine water quality monitoring, and TCEQ water sampling stations were used for river endmember values from the San Jacinto (average of west fork station #11243 and east fork station #11238) and Trinity (station #10896) rivers (TCEQ, 2022). River endmember DIC was calculated from TA and pH measurements using K₁ and K₂ constants from Millero (2010), and pH value on the NBS scale. Seasonally weighted averages were calculated by summing the TA or DIC concentration multiplied by daily discharge values for all river measurements of that season and dividing by the sum of all discharge values for all river measurements of that season (using meteorological seasons).&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;&amp;lt;strong&amp;gt;Historical Data&amp;lt;/strong&amp;gt;&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;Results from this study were compared to historical data for Galveston Bay obtained from the Surface Ocean CO₂ Atlas (SOCAT) database (Bakker et al., 2016), which provided fCO₂, water and xCO₂, air values, along with surface seawater salinity, temperature, and depth, with observations from 2006 and 2010 through 2016, primarily during the month of September. SOCAT transects followed a similar route to our study transect, beginning near station 4 and continuing outward into the GOM, with a side transect through the Galveston Channel, which separates Pelican Island from Galveston Island. fCO₂ values were converted to pCO₂ using the R package seacarb (Gattuso et al., 2022). SOCAT data were analyzed independently from the results of this study. As done before with ship data, SOCAT xCO₂, air was converted to pCO₂, air by accounting for water vapor pressure based on SST and SSS, assuming 100% humidity (Borges et al., 2004).&amp;lt;/p&amp;gt;</gco:CharacterString>
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                <gco:CharacterString>&amp;lt;p&amp;gt;&amp;lt;strong&amp;gt;Air-water CO2 flux calculation&amp;lt;/strong&amp;gt;&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;Air-water CO2 flux calculation is performed using the following equation:&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;F=kK0(pCO2,water−pCO2,air)(3)F = k K_0 (pCO_{2,water} - pCO_{2,air}) \tag{3}F=kK0(pCO2,water−pCO2,air)(3)&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;where:&amp;lt;/p&amp;gt;

&amp;lt;ul&amp;gt;
&amp;lt;li&amp;gt;FFF is the air-water CO2 flux,&amp;lt;/li&amp;gt;
&amp;lt;li&amp;gt;kkk (m d⁻¹) is the gas transfer velocity, calculated from wind speed,&amp;lt;/li&amp;gt;
&amp;lt;li&amp;gt;K0K_0K0 (mol m⁻³ atm⁻¹) is the gas solubility at measured in situ temperature and salinity (Weiss, 1974),&amp;lt;/li&amp;gt;
&amp;lt;li&amp;gt;pCO2,waterpCO_{2,water}pCO2,water and pCO2,airpCO_{2,air}pCO2,air are the partial pressures of CO₂ in water and air, respectively.&amp;lt;/li&amp;gt;
&amp;lt;/ul&amp;gt;

&amp;lt;p&amp;gt;The gas transfer velocity kkk is determined using the equation from Jiang et al. (2008):&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;k=(0.314×u102−0.436×u10+3.990)×(ScSST600)−0.5(4)k = (0.314 \times u_{10}^2 - 0.436 \times u_{10} + 3.990) \times \left( \frac{ScSST}{600} \right)^{-0.5} \tag{4}k=(0.314×u102−0.436×u10+3.990)×(600ScSST)−0.5(4)&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;Where:&amp;lt;/p&amp;gt;

&amp;lt;ul&amp;gt;
&amp;lt;li&amp;gt;u10u_{10}u10 is the wind speed at 10 m above the water surface (m s⁻¹),&amp;lt;/li&amp;gt;
&amp;lt;li&amp;gt;ScSSTScSSTScSST is the Schmidt number of CO₂ at the in situ temperature of seawater (Wanninkhof, 1992).&amp;lt;/li&amp;gt;
&amp;lt;/ul&amp;gt;

&amp;lt;p&amp;gt;Seasonal values are determined by averaging monthly CO2 flux estimates by season (fall, winter, spring, summer). Additionally, missing values for atmospheric pCO₂ are estimated using linear interpolation.&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;Thermally-adjusted water pCO₂ is calculated using an equation from Takahashi (2002) to account for temperature effects:&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;pCO2,waterthermally&amp;amp;nbsp;adjusted=(Eq.&amp;amp;nbsp;1&amp;amp;nbsp;from&amp;amp;nbsp;Takahashi)(1)pCO_{2,water_{thermally\ adjusted}} = \text{(Eq. 1 from Takahashi)} \tag{1}pCO2,waterthermally&amp;amp;nbsp;adjusted=(Eq.&amp;amp;nbsp;1&amp;amp;nbsp;from&amp;amp;nbsp;Takahashi)(1)&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;&amp;lt;strong&amp;gt;Statistical analyses&amp;lt;/strong&amp;gt;&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;Pearson’s correlation coefficients were calculated to determine the influence of wind speed and direction on pCO₂, air. Variables with a Pearson’s correlation p-value &amp;amp;lt; 0.05 and an absolute correlation coefficient &amp;amp;gt; 0.7 were considered significantly correlated with pCO₂, air.&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;Since data were non-normal and variances were non-homogeneous, Kruskal-Wallis nonparametric ANOVA tests were used to compare parameters such as DIC, TA, pH, and ΩAr between seasons and stations. Dunn tests were further used to test for pairwise differences (Ruxton &amp;amp;amp; Beauchamp, 2008).&amp;lt;/p&amp;gt;

&amp;lt;p&amp;gt;Multiple Linear Regression models were applied to assess biogeochemical influences on pCO₂. The final model included predictor variables such as DIC, TA, ΩAr, and pHT, after excluding salinity difference and SST.&amp;lt;/p&amp;gt;</gco:CharacterString>
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