| Contributors | Affiliation | Role |
|---|---|---|
| Nelson, James | University of Louisiana at Lafayette | Principal Investigator, Contact |
| Leavitt, Herbert | University of Louisiana at Lafayette | Student |
| Thomas, Alexander | University of Louisiana at Lafayette | Student |
| Soenen, Karen | Woods Hole Oceanographic Institution (WHOI BCO-DMO) | BCO-DMO Data Manager |
Habitat classes defined as follows:
Satellite images taken in 2022 of the entire port were selected from google earth, georeferenced and clipped to the study area. The satellite image had a resolution of 2.8 x 3.3 meters per pixel.
We estimated habitat cover by classifying satellite imagery in ArcGIS Pro (3.3.0). We used ArcGIS Pro’s Image Classification Tool to segment the satellite image into habitat types based on supervised training data. Training data was provided by drawing polygons around regions dominated by Spartina marsh and mangrove trees. We trained the model to classify regions water and artificial structures in the same manner. Training data is provided as "classification_training.shp". We used a support vector machine algorithm to classify the satellite image and made manual corrections where necessary. This method works by finding optimized hyperplanes in parameter space (in this case with each parameter corresponding to RGB values in the image) that best separate different categories in the training data, then applying those hyperplanes to separate pixels in the image. Model output and hyperparameters in the "Satellite classification model output.ecd" file.
| File |
|---|
Training Data filename: Classification_training.zip (ZIP Archive (ZIP), 640.78 KB) MD5:df2cc1df86355f3256eaf297abaee53a Manually classified regions of the satellite image map that were used to train the support vector machine model. Dataset Includes a shapefile (.shp, .cpg, dbf, .prj, .sbn, .shx files). Data uses EPSG:3857 - WGS 84 / Pseudo-Mercator Attribute table includes seven columns:Shapefile has 8 attributes with "Classname" holding the name of the habitat class. Habitat classes defined as follows: Water: Open water areas Mangrove: Land covered in mangrove vegetation Saltmarsh: Land covered in Saltmarsh vegetation Manmade: Artificial structures like houses, port facilities, and dredge berms Mud Flat: Regions of water that appear to be particularly shallow based on satellite imagery. |
fourchon_image.zip (ZIP Archive (ZIP), 21.87 MB) MD5:569ef9757f62d6b3568507932335ae1a Satellite image of Port Fourchon used for habitat classification |
google2022.zip (ZIP Archive (ZIP), 17.18 MB) MD5:ebeec486895feb388659a564a0261d14 Output habitat types from the ArcGIS Pro’s Image Classification Tool segmenting the satellite image. Main data file for dataset 947958. Dataset Includes a shapefile (.shp, .shx, .cpg, .prj, .sbn, .dbf). Data uses EPSG 4326 projected to WGS 1984 Web Mercator (auxiliary sphere). Attribute table includes seven columns:FID, Id, and gridcode are identical and identify objects in the dataframeShape: Data typeShape_Leng: Aggregated perimeter length of all polygons that share given Class_name in metersShape_Area: Aggregated area of all polygons that share given Class_name in square metersClass_name: name of the habitat class. Habitat classes defined as follows: Water: Open water areas Mangrove: Land covered in mangrove vegetation Saltmarsh: Land covered in Saltmarsh vegetation Manmade: Artificial structures like houses, port facilities, and dredge berms Mud Flat: Regions of water that appear to be particularly shallow based on satellite imagery. This class was merged with water in the final analysis. |
model_output.zip (ZIP Archive (ZIP), 2.30 MB) MD5:78d03ed47c8c6f8ecda6a8faae073962 Raster file that was the SVM model output. This was converted to polygons to produce the google_2022 shapefile |
support vector machine model output and hyperparameters filename: Satellite_classification_model_ecdfile.zip (ZIP Archive (ZIP), 6.90 KB) MD5:c4ee5efbd378db2d0846565f0c9dc453 model output from ArcGIS pro support vector machine classification algorithm including results and hyperparameters for the algorithm. |
NSF Award Abstract:
Coastal marshes provide a suite of vital functions that support natural and human communities. Humans frequently take for granted and exploit these ecosystem services without fully understanding the ecological feedbacks, linkages, and interdependencies of these processes to the wider ecosystem. As demands on coastal ecosystem services have risen, marshes have experienced substantial loss due to direct and indirect impacts from human activity. The rapidly changing coastal ecosystems of Louisiana provide a natural experiment for understanding how coastal change alters ecosystem function. This project is developing new metrics and tools to assess food web variability and test hypotheses on biodiversity and ecosystem function in coastal Louisiana. The research is determining how changing habitat configuration alters the distribution of energy across the seascape in a multitrophic system. This work is engaging students from the University of Louisiana Lafayette and Dillard University in placed-based learning by immersing them in the research and local restoration efforts to address land loss and preserve critical ecosystem services. Students are developing a deeper understanding of the complex issues facing coastal regions through formal course work, directed field work, and outreach. Students are interacting with stakeholders and managers who are currently battling coastal change. Their directed research projects are documenting changes in coastal habitat and coupling this knowledge with the consequences to ecosystems and the people who depend on them. By participating in the project students are emerging with knowledge and training that is making them into informed citizens and capable stewards of the future of our coastal ecosystems, while also preparing them for careers in STEM. The project is supporting two graduate students and a post-doc.
The transformation and movement of energy through a food web are key links between biodiversity and ecosystem function. A major hurdle to testing biodiversity ecosystem function theory is a limited ability to assess food web variability in space and time. This research is quantifying changing seascape structure, species diversity, and food web structure to better understand the relationship between biodiversity and energy flow through ecosystems. The project uses cutting edge tools and metrics to test hypotheses on how the distribution, abundance, and diversity of key species are altered by ecosystem change and how this affects function. The hypotheses driving the research are: 1) habitat is a more important indirect driver of trophic structure than a direct change to primary trophic pathways; and 2) horizontal and vertical diversity increases with habitat resource index. Stable isotope analysis is characterizing energy flow through the food web. Changes in horizontal and vertical diversity in a multitrophic system are being quantified using aerial surveys and field sampling. To assess the spatial and temporal change in food web resources, the project is combining results from stable isotope analysis and drone-based remote sensing technology to generate consumer specific energetic seascape maps (E-scapes) and trophic niche metrics. In combination these new metrics are providing insight into species’ responses to changing food web function across the seascape and through time.
This project is jointly funded by Biological Oceanography and the Established Program to Stimulate Competitive Research (EPSCoR).
This award reflects NSF's statutory mission and has been deemed worthy of support through evaluation using the Foundation's intellectual merit and broader impacts review criteria.
| Funding Source | Award |
|---|---|
| NSF Division of Ocean Sciences (NSF OCE) |