http://lod.bco-dmo.org/id/dataset/948216
eng; USA
utf8
dataset
Highest level of data collection, from a common set of sensors or instrumentation, usually within the same research project
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
2025-01-09
ISO 19115-2 Geographic Information - Metadata - Part 2: Extensions for Imagery and Gridded Data
ISO 19115-2:2009(E)
Behavioral data of Tegula funebralis in the presence of predator Pisaster ochraceus within laboratory mesocosms at Bodega Marine Lab in 2018
2025-01-09
publication
2025-01-09
revision
Marine Biological Laboratory/Woods Hole Oceanographic Institution Library (MBLWHOI DLA)
2025-05-05
publication
https://doi.org/10.26008/1912/bco-dmo.948216.1
Brian Gaylord
University of California - Davis: Bodega Marine Laboratory
principalInvestigator
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
publisher
Cite this dataset as: Ng, G., Gaylord, B. (2025) Behavioral data of Tegula funebralis in the presence of predator Pisaster ochraceus within laboratory mesocosms at Bodega Marine Lab in 2018. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2025-01-09 [if applicable, indicate subset used]. doi:10.26008/1912/bco-dmo.948216.1 [access date]
Dataset Description: <p>See "Related Datasets" section for other datasets to be published in Ng &amp; Gaylord (2025, in-prep).&nbsp; These datasets&nbsp;are also listed on the "Related-Resource" page for that results publication&nbsp;https://www.bco-dmo.org/related-resource/948176<br />
<br />
All datasets in this project can be viewed from the "Dataset Collections" of the project page&nbsp;https://www.bco-dmo.org/project/712799<br />
<br />
Of particular note are :<br />
<br />
Dataset: Fear behavior with predators: Nucella<br />
https://www.bco-dmo.org/dataset/948204</p>
<p>Dataset: Fear behavior with predators: Tegula in the presence of Cancer crab cues<br />
https://www.bco-dmo.org/dataset/948210</p>
<p>* The supplemental file "Fear_behavior_with_predators_analysis_package.zip" is attached to&nbsp;BCO-DMO datasets 948204, 948210, and 948216 (this dataset).&nbsp; The analysis package includes raw data and analysis R-scripts for all three datasets.</p> Methods and Sampling: <p>To examine the intensity of anti-predatory behavior of both <em>Tegula funebralis</em> and <em>Nucella lamellosa</em>, we measured the proportion of time individual snails spend above the waterline in the presence and absence of their predator species, <em>Pisaster ochraceus</em> and <em>Cancer productus</em>. Data from this experiment are used to calculate estimated predation rates for snails that do not behaviorally respond to their predators, which are used to determine the impact anti-predatory responses have on the strength of trophic cascades. The experiment was conducted within laboratory mesocosms at Bodega Marine Lab in 2018 and 2019.</p>
<p><em>Pisaster ochraceus</em>,<em> Cancer productus</em>, and <em>Tegula funebralis </em>were collected along the coastline of Sonoma County, California in 2018. Both <em>Pisaster</em> and <em>Tegula</em> were sampled at Carmet Beach (38.372172 N, -123.076438 W), and the <em>Cancer </em>crabs were gathered subtidally from Doran Beach (38.309334 N, -123.048703 W). <em>Nucella lamellosa</em> were collected at Washington Park in Anacortes, Washington (48.502190 N, -122.691865 W) in July 2019.</p>
<p>We measured the behavior of both <em>Nucella</em> and <em>Tegula</em> in the presence and absence of their respective predators. We established 20 mesocosms (33cm x 20cm x 11.5cm) each with 10 <em>Tegula </em>that were provided with <em>Ulva</em> sp. <em>ad libitum. </em>Half of the mesocosms were exposed to <em>Pisaster</em> cue and the other 10 to just seawater. Predator exposure was accomplished by placing an individual <em>Pisaster</em> in a separate container, and then allowing cue generated by it<em> </em>to flow into the appropriate mesocosms. <em>Pisaster</em> were fed an individual <em>Tegula </em>once a week. Over a period of 14 days, we measured the number of snails either above or below the water line. <em>Ulva </em>sp. was included in the experiment in case its presence affected the snails’ decision to leave the water. We used the same procedure with <em>Cancer </em>to estimate <em>Tegula’s </em>behavioral response to them. We also used an analogous procedure to estimate <em>Nucella’s</em> behavioral response to <em>Pisaster</em>, with the exception that only five snails were used in each mesocosm due to the larger sizes of individuals of this snail species, and a small rock with <em>Balanus</em> <em>glandula </em>replaced <em>Ulva</em> as the basal resource<em>.</em></p>
<p>Because a subset of our <em>Nucella</em> displayed morphological inducible defenses from the induction period, we also crossed the <em>Pisaster</em> cue treatment with the induced morphology treatment such that of the 10 mesocosms experiencing <em>Pisaster</em> cues, half of them contained induced <em>Nucella</em> and the other half had non-induced <em>Nucella</em>. Of the 10 mesocosms with no predator cue, half had induced <em>Nucella</em> and the other half had non-induced individuals.</p>
<p>To test the effect of predator cue on the snails’ behavior, we conducted a logistic regression on the proportion of snails in and out of the water line with container as a random effect. For <em>Nucella</em>, we also added induced morphology as a predictor along with its interaction with <em>Pisaster</em> cue, but because both terms were non-significant, we removed them from the final model. In addition, we added the containers they were housed in during the induction period as an additional random effect.</p>
<p>Organism identifiers (taxonomic names used in dataset metadata):</p>
<p>Scientific Name, Life Science Identifier (LSID)<br />
Tegula funebralis, urn:lsid:marinespecies.org:taxname:534190<br />
Nucella lamellosa, urn:lsid:marinespecies.org:taxname:404218<br />
Pisaster ochraceus,urn:lsid:marinespecies.org:taxname:240755<br />
Cancer productus,urn:lsid:marinespecies.org:taxname:440382<br />
Ulva sp., urn:lsid:marinespecies.org:taxname:144296<br />
Balanus glandula, urn:lsid:marinespecies.org:taxname:394848</p>
Funding provided by NSF Division of Ocean Sciences (NSF OCE) Award Number: OCE-1636191 Award URL: https://www.nsf.gov/awardsearch/show-award?AWD_ID=1636191
completed
Brian Gaylord
University of California - Davis: Bodega Marine Laboratory
707-875-1940
Bodega Marine Laboratory & Department of Evolution and Ecology 2099 Westshore Road, P.O. Box 247
Bodega Bay
CA
94923
USA
bpgaylord@ucdavis.edu
pointOfContact
asNeeded
Dataset Version: 1
Unknown
Observation
Date_local
Time_local
ISO_DateTime_UTC
Day
Containers
Pisaster
Out
In
theme
None, User defined
No BCO-DMO term
date_local
time_local
ISO_DateTime_UTC
time_elapsed
tank
count
featureType
BCO-DMO Standard Parameters
otherRestrictions
otherRestrictions
Access Constraints: none. Use Constraints: Please follow guidelines at: http://www.bco-dmo.org/terms-use Distribution liability: Under no circumstances shall BCO-DMO be liable for any direct, incidental, special, consequential, indirect, or punitive damages that result from the use of, or the inability to use, the materials in this data submission. If you are dissatisfied with any materials in this data submission your sole and exclusive remedy is to discontinue use.
Trophic consequences of ocean acidification: Intertidal sea star predators and their grazer prey
https://osprey.bco-dmo.org/project/712799
Trophic consequences of ocean acidification: Intertidal sea star predators and their grazer prey
<p><em>NSF Award Abstract:</em><br />
The absorption of human-produced carbon dioxide into the world's oceans is altering the chemistry of seawater, including decreasing its pH. Such changes, collectively called "ocean acidification", are expected to influence numerous types of sea creatures. This project examines how shifts in ocean pH affect animal behavior and thus interactions among species. It uses a case study system that involves sea star predators, snail grazers that they eat, and seaweeds consumed by the latter. The rocky-shore habitats where these organisms live have a long history of attention, and new findings from this work will further extend an already-large body of marine ecological knowledge. The project provides support for graduate and undergraduate students, including underrepresented students from a nearby community college. The project underpins the development of a new educational module for local K-12 schools. Findings will moreover be communicated to the public through the use of short film documentaries, as well as through established relationships with policy, management, and industry groups, and contacts with the media.</p>
<p>Ocean acidification is a global-scale perturbation. Most research on the topic, however, has examined effects on single species operating in isolation, leaving interactions among species underexplored. This project confronts this knowledge gap by considering how ocean acidification may shift predator-prey relationships through altered behavior. It targets as a model system sea stars, their gastropod grazer prey, and macoalgae consumed by the latter, via four lines of inquiry. 1) The project examines the functional response of the focal taxa to altered seawater chemistry, using experiments that target up to 16 discrete levels of pH. This experimental design is essential for identifying nonlinearities and tipping points. 2) The project addresses both consumptive and non-consumptive components of direct and indirect species interactions. The capacity of ocean acidification to influence such links is poorly known, and better understanding of this issue is a recognized priority. 3) The project combines controlled laboratory experiments with field trials that exploit tide pools and their unique pH signatures as natural mesocosms. Field tests of ocean acidification effects are relatively rare and are sorely needed. 4) A final research phase expands upon the above three components to address effects of ocean acidification on multiple additional taxa that interact in rocky intertidal systems, to provide a broad database that may have utility for future experiments or modeling.</p>
BOAR Trophic
largerWorkCitation
project
eng; USA
oceans
-123.076438
-123.048703
38.309334
38.372172
2018-04-25
2018-05-09
Central California coast, USA
0
BCO-DMO catalogue of parameters from Behavioral data of Tegula funebralis in the presence of predator Pisaster ochraceus within laboratory mesocosms at Bodega Marine Lab in 2018
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
http://lod.bco-dmo.org/id/dataset-parameter/959601.rdf
Name: Observation
Units: unitless
Description: <p>description</p>
http://lod.bco-dmo.org/id/dataset-parameter/959602.rdf
Name: Date_local
Units: unitless
Description: <p>date (local, US/Pacific time zone) of data collection.</p>
http://lod.bco-dmo.org/id/dataset-parameter/959603.rdf
Name: Time_local
Units: unitless
Description: <p>time (local, US/Pacific time zone) of data collection.</p>
http://lod.bco-dmo.org/id/dataset-parameter/959604.rdf
Name: ISO_DateTime_UTC
Units: unitless
Description: <p>datetime with timezone (UTC, in ISO 8601 format) of the data collection.</p>
http://lod.bco-dmo.org/id/dataset-parameter/959605.rdf
Name: Day
Units: days
Description: <p>the number of days since the start of the experiment.</p>
http://lod.bco-dmo.org/id/dataset-parameter/959606.rdf
Name: Containers
Units: unitless
Description: <p>mesocosm identfier. A unique identifier for individual mesocosm.</p>
http://lod.bco-dmo.org/id/dataset-parameter/959607.rdf
Name: Pisaster
Units: unitless
Description: <p>the presence or absence of Pisaster cues for the experiment (yes/no).</p>
http://lod.bco-dmo.org/id/dataset-parameter/959608.rdf
Name: Out
Units: unitless
Description: <p>the number of snails that were above the water line</p>
http://lod.bco-dmo.org/id/dataset-parameter/959609.rdf
Name: In
Units: unitless
Description: <p>the number of snails below the water line.</p>
GB/NERC/BODC > British Oceanographic Data Centre, Natural Environment Research Council, United Kingdom
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
17236
https://darchive.mblwhoilibrary.org/server/api/core/bitstreams/92ce3b09-c3ca-4f64-a797-aec81f760dcb/content
download
https://doi.org/10.26008/1912/bco-dmo.948216.1
download
onLine
dataset
<p>To examine the intensity of anti-predatory behavior of both <em>Tegula funebralis</em> and <em>Nucella lamellosa</em>, we measured the proportion of time individual snails spend above the waterline in the presence and absence of their predator species, <em>Pisaster ochraceus</em> and <em>Cancer productus</em>. Data from this experiment are used to calculate estimated predation rates for snails that do not behaviorally respond to their predators, which are used to determine the impact anti-predatory responses have on the strength of trophic cascades. The experiment was conducted within laboratory mesocosms at Bodega Marine Lab in 2018 and 2019.</p>
<p><em>Pisaster ochraceus</em>,<em> Cancer productus</em>, and <em>Tegula funebralis </em>were collected along the coastline of Sonoma County, California in 2018. Both <em>Pisaster</em> and <em>Tegula</em> were sampled at Carmet Beach (38.372172 N, -123.076438 W), and the <em>Cancer </em>crabs were gathered subtidally from Doran Beach (38.309334 N, -123.048703 W). <em>Nucella lamellosa</em> were collected at Washington Park in Anacortes, Washington (48.502190 N, -122.691865 W) in July 2019.</p>
<p>We measured the behavior of both <em>Nucella</em> and <em>Tegula</em> in the presence and absence of their respective predators. We established 20 mesocosms (33cm x 20cm x 11.5cm) each with 10 <em>Tegula </em>that were provided with <em>Ulva</em> sp. <em>ad libitum. </em>Half of the mesocosms were exposed to <em>Pisaster</em> cue and the other 10 to just seawater. Predator exposure was accomplished by placing an individual <em>Pisaster</em> in a separate container, and then allowing cue generated by it<em> </em>to flow into the appropriate mesocosms. <em>Pisaster</em> were fed an individual <em>Tegula </em>once a week. Over a period of 14 days, we measured the number of snails either above or below the water line. <em>Ulva </em>sp. was included in the experiment in case its presence affected the snails’ decision to leave the water. We used the same procedure with <em>Cancer </em>to estimate <em>Tegula’s </em>behavioral response to them. We also used an analogous procedure to estimate <em>Nucella’s</em> behavioral response to <em>Pisaster</em>, with the exception that only five snails were used in each mesocosm due to the larger sizes of individuals of this snail species, and a small rock with <em>Balanus</em> <em>glandula </em>replaced <em>Ulva</em> as the basal resource<em>.</em></p>
<p>Because a subset of our <em>Nucella</em> displayed morphological inducible defenses from the induction period, we also crossed the <em>Pisaster</em> cue treatment with the induced morphology treatment such that of the 10 mesocosms experiencing <em>Pisaster</em> cues, half of them contained induced <em>Nucella</em> and the other half had non-induced <em>Nucella</em>. Of the 10 mesocosms with no predator cue, half had induced <em>Nucella</em> and the other half had non-induced individuals.</p>
<p>To test the effect of predator cue on the snails’ behavior, we conducted a logistic regression on the proportion of snails in and out of the water line with container as a random effect. For <em>Nucella</em>, we also added induced morphology as a predictor along with its interaction with <em>Pisaster</em> cue, but because both terms were non-significant, we removed them from the final model. In addition, we added the containers they were housed in during the induction period as an additional random effect.</p>
<p>Organism identifiers (taxonomic names used in dataset metadata):</p>
<p>Scientific Name, Life Science Identifier (LSID)<br />
Tegula funebralis, urn:lsid:marinespecies.org:taxname:534190<br />
Nucella lamellosa, urn:lsid:marinespecies.org:taxname:404218<br />
Pisaster ochraceus,urn:lsid:marinespecies.org:taxname:240755<br />
Cancer productus,urn:lsid:marinespecies.org:taxname:440382<br />
Ulva sp., urn:lsid:marinespecies.org:taxname:144296<br />
Balanus glandula, urn:lsid:marinespecies.org:taxname:394848</p>
Specified by the Principal Investigator(s)
<p>See "Supplemental Files" for analysis package (R-language).</p>
Specified by the Principal Investigator(s)
* Raw data and analysis R-scripts for three related datasets were packaged into the supplemental file Fear_behavior_with_predators_analysis_package.zip (no modifications to files). The zip file was attached to all three datasets (BCO-DMO datasets 948204, 948210, 948216).
* Data table from submitted file "Tegula Pisaster behavior stats.csv" was imported into the BCO-DMO data system. Table will appear on this dataset page as Data File:
948216_v1_fear-behavior_tegula-with-pisaster.csv (with other download format options).
* Date column (format was %d-%b, e.g. 25-Apr) transformed to ISO date %Y-%m-%d (e.g. 2018-04-25), year assumed to be 2018 from provided metadata. Year was confirmed with the with data submitter.
* Column "Date" renamed to "Date_local", and "Time" renamed to "Time_local". [US/Pacific local time]
* New column "ISO_DateTime_UTC" added by combining "Date_local" and "Time_local" with timezone conversion to UTC in ISO 8601 format.
* Any column names with characters other than letters, numbers and underscores were renamed to meet BCO-DMO naming conventions designed to support broad re-use by a variety of research tools and scripting languages. [Only numbers, letters, and underscores. Can not start with a number]
Missing Data Identifiers:
* In the BCO-DMO data system missing data identifiers are displayed according to the format of data you access. For example, in csv files it will be blank (null) values. In Matlab .mat files it will be NaN values. When viewing data online at BCO-DMO, the missing value will be shown as blank (null) values.
* Taxonomic identifiers added to the metadata (Life Science Identifiers (LSID)). Names matched using the World Register of Marine Species (WoRMS) on 2024-01-02.
Specified by BCO-DMO Data Managers
asNeeded
7.x-1.1
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact