Contributors | Affiliation | Role |
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McGillicuddy, Dennis J. | Woods Hole Oceanographic Institution (WHOI) | Co-Principal Investigator |
Petitpas, Christian | Massachusetts Division of Marine Fisheries | Co-Principal Investigator, Contact |
Turner, Jefferson | University of Massachusetts Dartmouth (UMass Dartmouth) | Co-Principal Investigator |
Zhang, Weifeng Gordon | Woods Hole Oceanographic Institution (WHOI) | Co-Principal Investigator |
Soenen, Karen | Woods Hole Oceanographic Institution (WHOI BCO-DMO) | BCO-DMO Data Manager |
Daily zooplankton Grazing Experiments were conducted on each of three cruises as a component of the SPIROPA project. 12 experiments/Cruise, Targeting 3 water mass regimes: shelf, shelfbreak front and slope waters. CTD/Niskin bottle rosette equipped with a SBE 911 plus CTD system, and twenty-four 10 L Niskin bottles fitted with Teflon-coated external closures were used for water column sampling.
Grazing experiment sample water was collected with a CTD/Niskin bottle rosette at depths ranging from surface to 56m, targeting chl-a max if present. Two experimental treatments were treatments were incubated: 1. whole water to represent the entire plankton community and <200 µm fraction of plankton community to estimate microzooplankton grazing impact.
Separate triplicate 4-liter jars of each treatment were concurrently incubated for 24 hrs. in two separate incubation treatments: Dark and Light (30% Eo) flow-through seawater deck incubators. After 24-hour incubations 3 liters of each replicate were poured through 15 µm sieves that were backwashed into 50 ml centrifuge tubes for a 30 ml concentrate that was preserved in approximately 1% Utermöhl’s solution according to Guillard (1973)
Phytoplankton was identified to the lowest practical taxonomic level and quantified utilizing a using a Sedgwick-rafter counting chamber and Olympus BH-2 compound microscope.
File |
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961570_v1_phytoplankton.csv (Comma Separated Values (.csv), 1.94 MB) MD5:19eda8d324598caf5ffd01e94f5e77da Primary data file for dataset ID 961570, version 1 |
Parameter | Description | Units |
Exp_and_count_no | Consecutive experiment number for a given cruise (one experiment/day) and numerical sample ID for each treatment/replicate for the experiment | unitless |
Sample_ID_Number | numerical sample ID for each treatment/replicate for the experiment | unitless |
Sample_ID | Descriptive sample ID noting experiment number, station identifier, water depth where sample was collected, water mass category, experiment treatement code, and replicate number. | unitless |
Cruise | Cruise identifier | unitless |
Latitude | North latitude | decimal degrees |
Longitude | West longitude as indicated by negative | decimal degrees |
Experiment_No | One experiment was conducted per cruise day. This is the consecutive experiment number. | unitless |
Date_Collected | Date of sample collection | unitless |
Station | Alphanumeric Station identifier. | unitless |
Depth_M | Sample depth where dilution experiment water was collected with Niskin bottles | meters |
Water_Mass_Region | Identification of water mass type (shelf, slope, front) with hydographic feature( eddy, warm core ring, streamer) descrfiptor when present | unitless |
Micro_or_WW | WW= whole water sample incubated and Micro= water filtered through 200 µm sieve to remove mesozooplankton grazers | unitless |
Treatment_Replicate | Control= initial sample condition (no incubation); Dark = incubated in darkness; Light = Light treatment incubation 30% Eo neutral density filter; Number (1,2,3) represents replicate number | unitless |
Date_time_start | Date and time of start of incubation Local Time: EDT | unitless |
Date_time_stop | Date and time of incubation stop Local Time: EDT | unitless |
delta_t_day | Incubation period= incubation stop date/time minus incubation start date/time | day |
Original_Volume_L | Original sample volume | Liters |
Conc_Volume_mL | Concentrated sample volume after passing through 20 µm sieve | milliliters |
volume_counted_mL | Volume of concentrated sample microscopically processed for plankton ID and enumeration | milliliters |
Taxa_ID | Phytoplankton identification to the lowest practical taxonomic level | unitless |
Raw_Count | Microscopic count of identified plankton taxon | unitless |
Estimated_abundance_cells_L | Estimated abundance | cells/L |
Note | Additional notes | unitless |
Dataset-specific Instrument Name | |
Generic Instrument Name | CTD Sea-Bird SBE 911plus |
Dataset-specific Description | CTD/Niskin bottle rosette equipped with a SBE 911 plus CTD system, and twenty-four 10 L Niskin bottles fitted with Teflon-coated external closures were used for water column sampling. |
Generic Instrument Description | The Sea-Bird SBE 911 plus is a type of CTD instrument package for continuous measurement of conductivity, temperature and pressure. The SBE 911 plus includes the SBE 9plus Underwater Unit and the SBE 11plus Deck Unit (for real-time readout using conductive wire) for deployment from a vessel. The combination of the SBE 9 plus and SBE 11 plus is called a SBE 911 plus. The SBE 9 plus uses Sea-Bird's standard modular temperature and conductivity sensors (SBE 3 plus and SBE 4). The SBE 9 plus CTD can be configured with up to eight auxiliary sensors to measure other parameters including dissolved oxygen, pH, turbidity, fluorescence, light (PAR), light transmission, etc.). more information from Sea-Bird Electronics |
Dataset-specific Instrument Name | |
Generic Instrument Name | Niskin bottle |
Dataset-specific Description | CTD/Niskin bottle rosette equipped with a SBE 911 plus CTD system, and twenty-four 10 L Niskin bottles fitted with Teflon-coated external closures were used for water column sampling. Zooplankton were microscopically identified and counted using a Wild M5A dissecting microscope. |
Generic Instrument Description | A Niskin bottle (a next generation water sampler based on the Nansen bottle) is a cylindrical, non-metallic water collection device with stoppers at both ends. The bottles can be attached individually on a hydrowire or deployed in 12, 24, or 36 bottle Rosette systems mounted on a frame and combined with a CTD. Niskin bottles are used to collect discrete water samples for a range of measurements including pigments, nutrients, plankton, etc. |
Website | |
Platform | R/V Neil Armstrong |
Start Date | 2018-04-16 |
End Date | 2018-04-29 |
Website | |
Platform | NOAA Ship Ronald H. Brown |
Start Date | 2019-05-12 |
End Date | 2019-05-25 |
Website | |
Platform | R/V Thomas G. Thompson |
Start Date | 2019-07-05 |
End Date | 2019-07-18 |
Description |
NSF award abstract:
The continental shelf break of the Middle Atlantic Bight supports a productive and diverse ecosystem. Current paradigms suggest that this productivity is driven by several upwelling mechanisms at the shelf break front. This upwelling supplies nutrients that stimulate primary production by phytoplankton, which in turn leads to enhanced production at higher trophic levels. Although local enhancement of phytoplankton biomass has been observed in some circumstances, such a feature is curiously absent from time-averaged measurements, both from satellites and shipboard sampling. Why would there not be a mean enhancement in phytoplankton biomass as a result of the upwelling? One hypothesis is that grazing by zooplankton prevents accumulation of biomass on seasonal and longer time scales, transferring the excess production to higher trophic levels and thereby contributing to the overall productivity of the ecosystem. However, another possibility is that the net impact of these highly intermittent processes is not adequately represented in long-term means of the observations, because of the relatively low resolution of the in-water measurements and the fact that the frontal enhancement can take place below the depth observable by satellite. The deployment of the Ocean Observatories Initiative (OOI) Pioneer Array south of New England has provided a unique opportunity to test these hypotheses. The combination of moored instrumentation and autonomous underwater vehicles will facilitate observations of the frontal system with unprecedented spatial and temporal resolution. This will provide an ideal four-dimensional (space-time) context in which to conduct a detailed study of frontal dynamics and plankton communities needed to examine mechanisms controlling phytoplankton populations in this frontal system. This project will also: (1) promote teaching, training and learning via participation of graduate and undergraduate students in the research , (2) provide a broad dissemination of information by means of outreach in public forums, printed media, and a video documentary of the field work, and (3) contribute to improving societal well-being and increased economic competitiveness by providing the knowledge needed for science-based stewardship of coastal ecosystems, with particular emphasis on connecting with the fishing industry through the Commercial Fisheries Research Foundation.
The investigators will conduct a set of three cruises to obtain cross-shelf sections of physical, chemical, and biological properties within the Pioneer Array. Nutrient distributions will be assayed together with hydrography to detect the signature of frontal upwelling and associated nutrient supply. The investigators expect that enhanced nutrient supply will lead to changes in the phytoplankton assemblage, which will be quantified with conventional flow cytometry, imaging flow cytometry (Imaging FlowCytobot, IFCB), optical imaging (Video Plankton Recorder, VPR), traditional microscopic methods, and pigment analysis. Zooplankton will be measured in size classes ranging from micro- to mesozooplankton with the IFCB and VPR, respectively, and also with microscopic analysis. Biological responses to upwelling will be assessed by measuring rates of primary productivity, zooplankton grazing, and net community production. These observations will be synthesized in the context of a coupled physical-biological model to test the two hypotheses that can potentially explain prior observations: (1) grazer-mediated control and (2) undersampling. Hindcast simulations will also be used to diagnose the relative importance of the various mechanisms of upwelling. The intellectual merit of this effort stems from our interdisciplinary approach, advanced observational techniques, and integrated analysis in the context of a state-of-the-art coupled model. The project will address longstanding questions regarding hydrodynamics and productivity of an important ecosystem, leading to improved understanding of physical-biological interactions in a complex continental shelf regime. Given the importance of frontal systems in the global coastal ocean, it is expected that knowledge gained will have broad applicability beyond the specific region being studied.
Funding Source | Award |
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NSF Division of Ocean Sciences (NSF OCE) |