Porewater geochemistry data from sediment cores collected on R/V Rachel Carson cruise RC0107 in Clayoquot Sound, Vancouver Island, British Columbia during October 2023

Website: https://www.bco-dmo.org/dataset/992752
Data Type: Cruise Results
Version: 1
Version Date: 2026-01-21

Project
» CAREER: Cryptic sulfur cycling and organic matter preservation in marine oxygen deficient zones (Sulfur in Particles)
ContributorsAffiliationRole
Raven, Morgan ReedUniversity of California-Santa Barbara (UCSB)Principal Investigator
Evans, NatalyaUniversity of California-Santa Barbara (UCSB)Scientist
Martinez, AaronUniversity of California-Santa Barbara (UCSB)Scientist
Neibauer, Jacquelyn A.University of Washington (UW)Scientist
Crotteau, MollyUniversity of California-Santa Barbara (UCSB)Student
Fishburn, JordanUniversity of California-Santa Barbara (UCSB)Student
Karagiannis, MariannaUniversity of California-Santa Barbara (UCSB)Student
Rauch, ShannonWoods Hole Oceanographic Institution (WHOI BCO-DMO)BCO-DMO Data Manager

Abstract
This dataset includes porewater geochemistry data for samples collected on the R/V Rachel Carson cruise RC0107 between October 2nd and 8th, 2023 in Clayoquot Sound, Vancouver Island, British Columbia. Sediment cores were collected at three sites in Clayoquot Sound. Data reported here include: porewater chemistry (sulfate, sulfide, Fe(II), pH). These data will be useful for those interested in understanding organic matter preservation in fjords and other coastal environments. Samples were collected by Molly Crotteau, Morgan Raven, Aaron Martinez, Natalya Evans, Marianna Karagiannis, Jordan Fisburn, and Jaqui Neibauer. Data were interpreted by Morgan Raven and Molly Crotteau.


Coverage

Location: Clayoquot Sound, Vancouver Island, British Columbia
Spatial Extent: N:49.23 E:-125.6 S:49.17 W:-125.7
Temporal Extent: 2024-10-04 - 2024-10-06

Dataset Description

This dataset is one of three datasets presenting marine biogeochemistry data from four sites in Clayoquot Sound, Vancouver Island, British Columbia from water, sediment, and porewater samples that were collected aboard the R/V Rachel Carson in October 2023. These sites were selected because they represent hotspots of organic carbon burial spanning a range of geochemical conditions. They represent a range of oxic to historically anoxic water columns, and receive organic matter inputs varying from predominantly terrestrial to predominantly marine sources. Together, these datasets provide a framework to evaluate the controls and drivers of organic matter preservation in fjord sediments. See the "Related Datasets" section for the other datasets.

Methods & Sampling

Nine sediment cores were collected from three different sites in Clayoquot Sound, Vancouver Island, Canada in October 2023. One core was used for porewater sampling; this core was sampled immediately with Rhizon samplers. A second core was extruded under argon for geochemical measurements. (See "Related Datasets" for the sediment geochemical data.) 1 milliliter (mL) of sediment was added to a cryovial and frozen at -20 degrees Celsius (°C) for future DNA extraction. 5 mL of sediment was added to an exetainer containing 5 mL of 1 N NaOH to measure sediment methane concentrations. The remaining sediment from each extruded interval was added immediately to falcon tubes containing 10 mL of 20% zinc acetate to precipitate sulfides and halt microbial activity. A third archive core was immediately frozen at -20°C.

Porewater samples from each core were aliquoted to measure pH and the concentrations of dissolved Fe(II), sulfate, and sulfide. pH was determined using the dye meta-cresol purple via a UV-Vis spectrophotometer (Genesys 150) (Clayton and Byrne 1993). Fe(II) was determined using a ferrozine assay (Jeitner 2014). Sulfate was measured via ion chromatography (Metrohm 930 Compact IC Flex). Sulfide was precipitated as zinc sulfide in the field by adding 4 mL of porewater to 4 mL of sparged 20% zinc acetate solution. To avoid sulfate contamination, porewater zinc sulfide samples were subjected to a strong acid hydrolysis (6 N HCl, 60°C, 2 hours) under N₂ to volatilize zinc sulfides; sulfide was trapped as zinc sulfide in 5% zinc acetate solution, oxidized to sulfate with 30% H₂O₂, and measured via ion chromatography (Metrohm 930 Compact IC Flex).

Samples analyzed in this study were collected within Ahousaht Territory, on the west coast of Vancouver Island, British Columbia. We respectfully acknowledge the Ahousaht Nation and the Maaqutusiis Hahoulthee Stewardship Society for their stewardship of these lands and for the opportunity to conduct research within their territory.


Data Processing Description

Organic C/N/S concentrations were calculated with a sulfanilamide standard curve (0.5 – 25 micromoles (µmole) N, 1.5 – 75 µmole C, 0.25 – 12 µmole S). Sample δ13C values were calibrated using carbon isotope standards USGS-61 (35.05‰), 62 (-14.79‰), and 63 (1.17‰) run in triplicate and are reported relative to Vienna Pee Dee Belemnite. Sulfate concentrations were calibrated using a sulfate standard curve (0.1 – 100 parts per million (ppm)). Fe(II) concentrations were calibrated using a Fe(II) standard curve (0 – 80 µM).


BCO-DMO Processing Description

- Imported original file "20251007_FJ_porewater.csv" into the BCO-DMO system.
- Converted the date field to YYYY-MM-DD format.
- Saved the final file as "992752_v1_porewater_geochemistry.csv".


[ table of contents | back to top ]

Related Publications

Clayton, T. D., & Byrne, R. H. (1993). Spectrophotometric seawater pH measurements: total hydrogen ion concentration scale calibration of m-cresol purple and at-sea results. Deep Sea Research Part I: Oceanographic Research Papers, 40(10), 2115–2129. doi:10.1016/0967-0637(93)90048-8
Methods
Jeitner, T. M. (2014). Optimized ferrozine-based assay for dissolved iron. Analytical Biochemistry, 454, 36–37. https://doi.org/10.1016/j.ab.2014.02.026
Methods

[ table of contents | back to top ]

Related Datasets

IsRelatedTo
Crotteau, M., Raven, M. R., Martinez, A., Evans, N., Karagiannis, M., Fishburn, J., Neibauer, J. A. (2026) Carbon system measurements, methane, nutrients, and sulfate concentrations from water column samples collected on R/V Rachel Carson cruise RC0107 in Clayoquot Sound, Vancouver Island, British Columbia during October 2023. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2026-01-22 http://lod.bco-dmo.org/id/dataset/992821 [view at BCO-DMO]
Crotteau, M., Raven, M. R., Martinez, A., Evans, N., Karagiannis, M., Fishburn, J., Neibauer, J. A. (2026) Sediment geochemistry data from cores collected on R/V Rachel Carson cruise RC0107 in Clayoquot Sound, Vancouver Island, British Columbia during October 2023. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2026-01-21 http://lod.bco-dmo.org/id/dataset/992723 [view at BCO-DMO]

[ table of contents | back to top ]

Parameters

ParameterDescriptionUnits
site

Site number (51.5, 47, or 48) where sediment core was taken

unitless
latitude

Latitude of sampling location

decimal degrees
longitude

Longitude of sampling location

decimal degrees
date

Date sample was collected

unitless
core

The sediment cores were labeled porewater, highres, and archive

unitless
depth

Sampling depth relative to sediment-water interface

centimeters
H2S

Concentration of porewater sulfide

millimolar
H2S_e

Error associated with H2S

millimolar
SO4

Concentration of porewater sulfate

millimolar
SO4_e

Error associated with SO4

millimolar
Fe

Concentration of dissolved Fe(II) in sediment porewater

micromolar
Fe_e

Error associated with Fe

micromolar
pH

pH of sediment porewater

micromolar


[ table of contents | back to top ]

Instruments

Dataset-specific Instrument Name
Metrosep A Supp 5 100/4.0 column and Metrohm 930 Compact IC Flex
Generic Instrument Name
Ion Chromatograph
Dataset-specific Description
Used to measure concentrations of sulfate, sulfide, AVS, and CRS.
Generic Instrument Description
Ion chromatography is a form of liquid chromatography that measures concentrations of ionic species by separating them based on their interaction with a resin. Ionic species separate differently depending on species type and size. Ion chromatographs are able to measure concentrations of major anions, such as fluoride, chloride, nitrate, nitrite, and sulfate, as well as major cations such as lithium, sodium, ammonium, potassium, calcium, and magnesium in the parts-per-billion (ppb) range. (from http://serc.carleton.edu/microbelife/research_methods/biogeochemical/ic....)

Dataset-specific Instrument Name
Mulitcorer
Generic Instrument Name
Multi Corer
Dataset-specific Description
Used to collect sediment cores.
Generic Instrument Description
The Multi Corer is a benthic coring device used to collect multiple, simultaneous, undisturbed sediment/water samples from the seafloor. Multiple coring tubes with varying sampling capacity depending on tube dimensions are mounted in a frame designed to sample the deep ocean seafloor. For more information, see Barnett et al. (1984) in Oceanologica Acta, 7, pp. 399-408.

Dataset-specific Instrument Name
Genesys 150 UV-Vis Spectrophotometer
Generic Instrument Name
Spectrophotometer
Dataset-specific Description
Used to measure Fe(II) and pH.
Generic Instrument Description
An instrument used to measure the relative absorption of electromagnetic radiation of different wavelengths in the near infra-red, visible and ultraviolet wavebands by samples.


[ table of contents | back to top ]

Deployments

RC0107

Website
Platform
R/V Rachel Carson (UW)
Start Date
2023-10-02
End Date
2023-10-08
Description
See more information from R2R: https://www.rvdata.us/search/cruise/RC0107


[ table of contents | back to top ]

Project Information

CAREER: Cryptic sulfur cycling and organic matter preservation in marine oxygen deficient zones (Sulfur in Particles)

Coverage: Eastern tropical North Pacific


NSF Award Abstract:

CAREER: Particle-Hosted Sulfur Cycling and Organic Matter Burial in Oxygen Deficient Zones

Areas of the ocean without dissolved oxygen are called anoxic zones. These environments are increasing due to human activities and climate change. Large amounts of organic carbon are buried in sediments below anoxic zones. However, we do not fully understand why organic carbon is preserved in these zones. This project seeks to understand a newly discovered process that may contribute to carbon preservation in anoxic zones. The process is called organic matter sulfurization. Through this process, organic matter is transformed and effectively ?pickled? by reacting with sulfide. Rapid sulfurization reactions were identified for the first time in sinking marine particles and may have larger effect on carbon burial in sediments than previously thought. This project will be the first to provide measurements of the scale and significance of rapid organic matter sulfurization in modern anoxic zones. This project includes field and laboratory studies. The research will involve a team of students, including a graduate student and six undergraduates, who will be supported through a peer mentorship program. Undergraduate researchers will be recruited from the inaugural class of a newly developed Practical Research Skills course (Earth 101A) at the University of California Santa Barbara. It seeks to help undergraduates develop critical thinking and observational skills that have broad applicability. This project will launch a self-sustaining and vigorous research program in marine biogeochemistry, heavily invested in undergraduate research education, with impacts that will outlast its five-year duration.

The overarching research goal of this project is to assess the contribution of sulfurization reactions to organic carbon preservation in anoxic environments. After constructing and testing a set of customized particle traps, an expedition will be conducted to the marine anoxic zone off the coast of Mexico. Sinking particles, suspended materials, and surface sediments will be collected at three sites on the Mexican shelf and slope, that have generally high local productivity and gradients in bottom-water oxygen concentration. In the field, the rates and isotopic fractionation of microbial sulfate reduction and organic sulfur formation will be measured with stable and radioactive isotope tracers. Subsequently, organic sulfur sources from both natural samples and laboratory experiments will be characterized using mass spectrometry, X-ray absorption spectroscopy, and other geochemical techniques. Together, the results of this work will identify the timing and location of organic matter sulfurization in this environment, which have substantial implications for both modeling marine carbon fluxes and interpreting the geologic record. This study will provide the first quantitative estimates of the scale of organic matter sulfurization in anoxic marine zones, its contribution to sedimentary carbon burial, and its sensitivities to environmental change. Simultaneously, this project will improve the Earth Science undergraduate curriculum at the University of California Santa Barbara through the development of a clear, supportive, and accessible mechanism for including students in research.

This award reflects NSF's statutory mission and has been deemed worthy of support through evaluation using the Foundation's intellectual merit and broader impacts review criteria.



[ table of contents | back to top ]

Funding

Funding SourceAward
NSF Division of Ocean Sciences (NSF OCE)

[ table of contents | back to top ]