©2026 Biological and Chemical Oceanography Data Management Office.Funded by the U.S. National Science Foundation
©2026 Biological and Chemical Oceanography Data Management Office.No relevant match in BCO-DMO instrument vocabulary.
| Dataset Name | PI-Supplied Description | PI-Supplied Name |
|---|---|---|
| Table 1: Experimental conditions and fluid carbonate chemistry for RPI-3 run where only aragonite precipitated | Custom designed pressure chamber used to simulate the high-pressure conditions at the seafloor for this set of experiments.(designed at Rensselaer Polytech Institute, Department of Earth and Environmental Sciences) | high-pressure apparatus |
| Diel multi 'omics data from surface ocean microbial community samples collected during Hawaiʻi Diel Sampling (HaDS) in Kāneʻohe Bay and adjacent offshore waters of Oʻahu, Hawaiʻi from December 2020 to August 2021 | vortexing samples | Vortex-Genie 2 (Scientific Industries, Bohemia, NY, USA) |
| Diel multi 'omics data from surface ocean microbial community samples collected during Hawaiʻi Diel Sampling (HaDS) in Kāneʻohe Bay and adjacent offshore waters of Oʻahu, Hawaiʻi from December 2020 to August 2021 | vortexing samples | Vortex adapter 24 (Qiagen, Hilden, Germany) |
| Larvae from Seafloor Larval Observatory (SLO) benthic traps with RNALater deployed during cruise TN391 (Jun 2021) and recovered on cruise AT50-04 (Oct 2022) in the Gulf of Mexico and Western Atlantic | Technicap brand 12-tube carousel and motor in a custom plastic housing. Homemade PVC larval tube traps. | tube trap |
| Molecular identification of genetic variants of Neocalanus flemingeri in the Gulf of Alaska from samples collected from 2015 to 2023 | General Oceanics messenger with double trip mechanism | |
| Multi-angle laser light scattering data of colloidal matter in field samples from the outer reaches of the Damariscotta River Estuary, Maine collected between October of 2017 and July of 2018. | PostNova Flow Field Flow Fractionation Instrument equipped with UV detection and coupled to a PostNova Multi-Angle Laser Light Scattering (MALLS) detector, with collection at angles 35°, 50°, 75°, 90°, 105°, 130°, and 145°. | PostNova Flow Field Flow Fractionation Instrument |
| Processed eddy covariance measurements from three lander deployments during R/V Oceanus cruises OC1802B and OC1901A along the Oregon shelf in 2018 and 2019. | A new fiber-optic sensor was installed for each EC experiment, and it was calibrated in seawater solutions at 0 and 100% air saturation using FirestingO2 software, before and after each deployment. When processing EC data records the specific Firesting “pre” and “post” calibration parameters were applied with time-series inputs of temperature, salinity and pressure to convert the sensor measurements to two parallel O2 time-series in units of mmol L-1. Because it was observed that the fiber-optic sensor calibrations shifted gradually over time, independent reference measurements (from OOI data products or ship-based casts) were used to derive corrected fiber-optic time-series based on the fractions of pre- and post- calibration series needed to align with the reference measurements. For each deployment, four reference points were assigned, with calibration proportions extrapolated in between each reference point. Not surprisingly, these fractions shifted from mostly dependent on the “pre” calibration to dominantly the “post” calibration over the course of each deployment. Adjustments in mean concentration were generally about 10%. | |
| Drop Sampling Data from Port Fourchon, Louisiana collected in 2006, 2016, 2022 and 2023 | All species in this study were collected using a drop sampler method specifically designed for flooded marsh habitats, providing a standardized approach across sampling years. The design of the drop samplers used in 2005, 2015, and 2022 varied slightly in terms of construction materials and deployment mechanisms to adapt to equipment improvements over time, but the essential structure remained the same. Each sampler employed a 1-m² cylinder, suspended from a boom arm, to minimize disturbance prior to deployment. The cylinder was rapidly lowered to enclose a section of flooded marsh habitat, ensuring precise capture of benthic and water-column organisms (Nelson et al., 2019; Zimmerman et al., 1984). | drop sampler |
| Semi-quantitative cell proteome of marine Synechococcus WH8102 using DIA-MS, interactive nutrient-temperature responses in stable chemostat bioreactors from laboratory experiments conducted in 2019 at the University of California, Irvine | Synechococcus cultures (WH8102) were grown in polycarbonate bottles. | 8 L polycarbonate bottles |
| Semi-quantitative cell proteome of marine Synechococcus WH8102 using DIA-MS, interactive nutrient-temperature responses in stable chemostat bioreactors from laboratory experiments conducted in 2019 at the University of California, Irvine | 47 mm polycarbonate filter (0.2 µm pore size, Millipore): Cells for proteome analysis were collected with a 47 mm polycarbonate filter (0.2 µm pore size, Millipore) 7-8 hours into the light period, pelleted by centrifugation in 2 mL centrifuge tubes (21,130 g for 3 minutes), flash frozen in liquid nitrogen, and stored at -80°C. | |
| Infectivity assays and ultrastructural characterization of Thalassia testudinum agroinfected with Turtle grass virus X (TGVX) in laboratory aquaria, February-May 2024 | Aeration System: Aquarium air pumps with diffusers – used to oxygenate water. | |
| Infectivity assays and ultrastructural characterization of Thalassia testudinum agroinfected with Turtle grass virus X (TGVX) in laboratory aquaria, February-May 2024 | Plant Grow Light: GLP24ADJS/19W/LED (Home Depot) – used to simulate natural light photoperiod (16:8 L:D). | GLP24ADJS/19W/LED |
| Infectivity assays and ultrastructural characterization of Thalassia testudinum agroinfected with Turtle grass virus X (TGVX) in laboratory aquaria, February-May 2024 | UV Transilluminator: Syngene Ingenius 3 – used for visualization of ethidium bromide-stained nucleic acids. | Syngene Ingenius 3 |
| Infectivity assays and ultrastructural characterization of Thalassia testudinum agroinfected with Turtle grass virus X (TGVX) in laboratory aquaria, February-May 2024 | Biosafety Cabinet: AirClean 600 PCR Workstation – used to prevent contamination during RNA and PCR preparation. | AirClean 600 PCR Workstation |
| Infectivity assays and ultrastructural characterization of Thalassia testudinum agroinfected with Turtle grass virus X (TGVX) in laboratory aquaria, February-May 2024 | Ultramicrotome: Leica EM UC6 – used to prepare ultrathin sections for TEM. | Leica EM UC6 |
| Infectivity assays and ultrastructural characterization of Thalassia testudinum agroinfected with Turtle grass virus X (TGVX) in laboratory aquaria, February-May 2024 | Glass Aquaria: 10-liter capacity – used for maintaining Thalassia testudinum plants under controlled lab conditions. | Glass Aquaria |
| Table 2. Elemental ratios and partition coefficients for CaCO3 in deepsea conditions: Mg, S, Sr, and Ba between crystallized solids and fluid. | Custom designed pressure chamber used to simulate the high-pressure conditions at the seafloor for this set of experiments (designed at Rensselaer Polytech Institute, Department of Earth and Environmental Sciences). | high-pressure apparatus |