Dataset: UCSB Mussel Growth - Mussel body size data for RNA-Seq project

Name: California mussel body size data for RNA-Seq project from UCSB Mussel Growth study from Hofmann laboratory at Campus Point, Goleta, CA in 2015 (OMEGAS-II project)
Published: 2016-03-07
Keywords: oceans

Cite This Dataset

Spatial Extent: N:34.3 E:-119.84 S:34.3 W:-119.84

Project:

OMEGAS II - Linking ecological and organismal responses to the ocean acidification seascape in the California Current System (OMEGAS-II)

Program:

Science, Engineering and Education for Sustainability NSF-Wide Investment (SEES): Ocean Acidification (formerly CRI-OA) (SEES-OA)

Principal Investigator:

Gretchen E. Hofmann (University of California-Santa Barbara, UCSB-LifeSci)

Contact:

Libe Washburn (University of California-Santa Barbara, UCSB-MSI)

BCO-DMO Data Manager:

Stephen R. Gegg (Woods Hole Oceanographic Institution, WHOI BCO-DMO)

Version:

07 March 2016

Version Date:

2016-03-07

Restricted:

Validated:

Yes

Current State:

Final no updates expected

California mussel body size data for RNA-Seq project from UCSB Mussel Growth study from Hofmann laboratory at Campus Point, Goleta, CA in 2015 (OMEGAS-II project)

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Description

Mussel Growth Data - UCSB - Mussel body size data for RNA-Seq project

63h D-hinge larvae reared under 350µatm and 1300 µatm, described in: High pCO2 affects body size, but not gene expression in larvae of the California mussel (Mytilus californianus)

Sample Id: "11-L-un" or "12-H-un"
Where H refers to high CO2
L= low CO2
The number is bucket number
And 'un' refers to the fact the cultures were unfiltered

Related Reference:
Kelly, M.W., J. L. Padilla-Gamiño, G. E. Hofmann (2015) High pCO₂ affects body size, but not gene expression in larvae of the California mussel (Mytilus californianus). ICES Journal of Marine Science. doi: 10.1093/icesjms/fsv184.

Methods & Sampling

63h D-hinge larvae reared under 350µatm and 1300 µatm, described in: High pCO2 affects body size, but not gene expression in larvae of the California mussel (Mytilus californianus)

Data Processing Description

BCO-DMO Processing Notes
- Generated from original file: "Mussel size data for ICES JMS paper.xlsx" contributed by Gretchen Hofmann
- Parameter names edited to conform to BCO-DMO naming convention found at Choosing Parameter Name
- Site and Lat/Lon of site added from published paper

Data Files

File
UCSB_MusselGrowth_Size.csv (Comma Separated Values (.csv), 19.84 KB) MD5:beb3ba5f3ad4aef1adbbd0c384825d72 Primary data file for dataset ID 639731

More Information about this dataset

Funding Sources

Funding Source	Award Number
NSF Division of Ocean Sciences	OCE-1220359

Deployments

Deployment	Synonyms	Start Date	Platform	Investigator
Hofmann_CampusPoint_Goleta_CA		2015-01-15	CampusPoint_Goleta_CA	Gretchen E. Hofmann (Principal Investigator)	data info

Instruments

None available yet

Parameters

Date and time formats are described in python strftime() syntax.

Supplied Name	Supplied description	Supplied Units	Standard Name
Latitude	Latitude (South is negative)	decimal degrees	lat
Longitude	Longitude (West is negative)	decimal degrees	lon
max_diameter	max_diameter	mm	diameter
SITE	Site Id	text	site
sampleID	sampleID Where H refers to high CO2 L= low CO2 The number is bucket number And 'un' refers to the fact the cultures were unfiltered	text	sample
FAMILY	FAMILY	text	family
co2_treat	co2 treatment	text	treatment

Status message

Database

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Dataset: UCSB Mussel Growth - Mussel body size data for RNA-Seq project