Dataset: Sample key: Dcyl_Symb_2015-2016

Name: Sample key for Symbiodinium species and abundance in Dendrogyra cylindrus from 3 regions of the Florida Reef Tract 2015 - 2016 (EMUCoReS project)
Published: 2017-05-17
Keywords: biota, oceans

Cite This Dataset

Spatial Extent: N:25 E:-80.4 S:24.47 W:-81.75

Temporal Extent: 2015-04-01 - 2016-04-30

Project:

RAPID: A hyper-thermal anomaly in the Florida Reef Tract: An opportunity to explore the mechanisms underpinning patterns of coral bleaching and disease (EMUCoReS)

Principal Investigator:

Dr Mauricio Rodriguez-Lanetty (Florida International University, FIU)

Co-Principal Investigator:

Dr Diego Lirman (University of Miami Rosenstiel School of Marine and Atmospheric Science, UM-RSMAS)

Dr Laurie Richardson (Florida International University, FIU)

BCO-DMO Data Manager:

Nancy Copley (Woods Hole Oceanographic Institution, WHOI BCO-DMO)

Version Date:

2017-05-17

Restricted:

Validated:

Current State:

Preliminary and in progress

Sample key for Symbiodinium species and abundance in Dendrogyra cylindrus from 3 regions of the Florida Reef Tract 2015 - 2016 (EMUCoReS project)

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Description

This dataset includes a key to samples of Dendrogyra cylindrus which were analyzed for 23S on an Illumina platform from three sites in the Florida Reef Tract, one each in the upper, middle and lower Keys in 2015-2016. Tube numbers are matched to sample name, status (pre-bleach, pale, bleached, recovery), region, locations, sampling time point, total number of colonies and number of colonies sampled.

Data Processing Description

BCO-DMO Processing Notes:
- added conventional header with dataset name, PI name, version date
- modified parameter names to conform with BCO-DMO naming conventions

Data Files

File
sample_key_Dcyl_2015_16.csv (Comma Separated Values (.csv), 4.40 KB) MD5:4970e86ec7c61bedff8641e450cebf0d Primary data file for dataset ID 700101

More Information about this dataset

Funding Sources

Funding Source	Award Number
NSF Division of Ocean Sciences	OCE-1503430
NSF Division of Ocean Sciences	OCE-1503483

Deployments

Deployment	Synonyms	Start Date	Platform	Investigator
Coral_Bleaching_FRRP		2014-01-01	shoreside Florida_Coral_Reefs	Dr Mauricio Rodriguez-Lanetty (Principal Investigator)	data info

Instruments

None available yet

Parameters

Date and time formats are described in python strftime() syntax.

Supplied Name	Supplied description	Supplied Units	Standard Name
date_sampled	date sampled	unitless	date
depth	sampling depth	meters	depth
lat	latitude; north is positive	decimal degrees	lat
lon	longitude; east is postivie	decimal degrees	lon
num_colonies_sampled	number of Dendrogyra cylindrus colonies sampled	colonies	count
sample_ID	sample identifier ((yyyymmdd.site.colony-num)	unitless	sample
site	collection site	unitless	site
total_num_colonies	total number of Dendrogyra cylindrus colonies	colonies	count
tube	sample tube	unitless	sample

Status message

Database

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Dataset: Sample key: Dcyl_Symb_2015-2016