Contributors | Affiliation | Role |
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White, Angelicque E. | Oregon State University (OSU) | Principal Investigator |
Quay, Paul | University of Washington (UW) | Co-Principal Investigator |
Biddle, Mathew | Woods Hole Oceanographic Institution (WHOI BCO-DMO) | BCO-DMO Data Manager |
The cruise (KM1713) transited from Seward, AK to Honolulu, HI from 3-26 September 2017 onboard the R/V Kilo Moana. Six extended stations (Stn), three in subpolar waters (Stn 1 at 55°N, Stn 2 at 50°N, and Stn 3 at 46°N), one in the transition zone between subpolar and subtropical waters (Stn 4 at 42°N), and two in the subtropical gyre (Stn 5 at 34°N, and Stn 6 at 24°N) were occupied for 2-3 day periods during which continuous measurements of conductivity, temperature, O2, O2/Ar and beam attenuation were measured continuously on surface seawater supplied via the ships’ intake line and using CTD profiles of conductivity, temperature, pressure, oxygen, and the particulate beam attenuation coefficient conducted at ~2-hr intervals. An autonomous profiling float was deployed for ~ 2 days at four stations, retrieving CTD and oxygen profiles at approximately 3-hour intervals. Another float with same mission design was deployed near station ALOHA (22.45° N, 158° W) during July 2017 to provide mixed-layer averaged O2 near station 6. When available, the ship followed the trajectory of the profiling float, yielding a near-Lagrangian sampling strategy with the aim to minimize horizontal mixing effects.
Underway/continuous measurements of O2, O2/Ar and optically-based POC
Continuous measurements of surface O2, O2/Ar, POC, and beam attenuation coefficients used seawater supplied from an uncontaminated seawater intake line located at ~7m depth. All continuous measurements were binned into hourly averages at each station. Continuous measurements of dissolved O2 concentration using an Optode (Aanderaa) and the dissolved O2/Ar gas ratios using an equilibrator inlet mass spectrometer (EIMS) system [Cassar et al., 2009] were obtained at each station. Dissolved oxygen data (Optode) were corrected for pressure and salinity following Uchida et al. [2008]. O2/Ar measured by the EIMS were calibrated to O2/Ar measurements by mass spectrometer on discrete water samples collected in the mixed layer during the cruise (n=58). Saturated O2 concentrations and O2/Ar values were calculated using the solubility equations of García and Gordon [1992] for O2 and Hamme and Emerson [2004] for Ar. Diurnal changes in O2/Ar data measured by the EIMS instrument were corrected for fluctuations in total gas pressure based on concurrent changes in N2/Ar, yielding O2/Ar*, (i.e., % deviation in O2/Ar* = % deviation O2/Ar – a*% deviation N2/Ar, where ‘a’ represents a calibration factor between N2/Ar and O2/Ar deviations determined at each station). Diurnal changes in O2 were determined by multiplying the relative deviation from the mean O2 measured by the Optode by the mean surface Winkler O2 concentration measured at each station (Eq. 1), where i refers to each datapoint in time, and overbars denotes the mean values while on each station. The diurnal changes in O2/Ar and O2/Ar* were calibrated to Winkler concentrations using the same procedure.
Discrete water samples (collected on combusted GF/F filters with filter blank corrections following the Hawaiian Ocean Time Series (HOT) protocols, http://hahana.soest.hawaii.edu/hot/methods/pcpn.html) were collected from the ship’s uncontaminated seawater system to determine particulate organic carbon (POC) concentrations every ~2.5 hours (n=107 in total) using a semi-automated filtration device [based on the design of Holser et al., 2011]. Underway POC were scaled to mean near-surface (<10 m) samples collected at each station (n=12; r2=0.92) and these corrected values were then used to convert cp measurements to POC using Eq. 2, where is the mean in situ POC measured at each station.
BCO-DMO Processing Notes:
- added conventional header with dataset name, PI name, version date
- modified parameter names to conform with BCO-DMO naming conventions
- added ISO Date format generated from date and time values
- combined POC and O2 continuous data
Parameter | Description | Units |
year | year of observation | unitless |
decimal_day_of_year | decimal day of the year in UTC | unitless |
ISO_DateTime_UTC | Date and time formatted according to ISO8601 in UTC | yyyy-MM-dd'T'HH:mm:ss'Z' |
lon | longitude with negative values indicating West | decimal degrees |
lat | latitude with positive values indicating North | decimal degrees |
sta | station number | unitless |
beam_attenuation_coeff_POC | continuous surface particulate beam attenuation coefficient calibrated to particulate organic carbon concentrations (POC) | miligrams Carbon per meter cubed (mg C/m3) |
O2_Ar | continuous surface Winkler-calibrated O2/Ar (mmol/m3) | millimole per meter cubed (mmol/m3) |
O2 | continutous surface Winkler-calibrated O2 (from Optode) | millimole per meter cubed (mmol/m3) |
MLD | Mixed Layer Depth | meters (m) |
O2_Ar_norm_N2_Ar | continuous surface Winkler-calibrated O2/Ar normalized by N2/Ar (O2/Ar*; see manuscript) | millimole per meter cubed (mmol/m3) |
Dataset-specific Instrument Name | Optode (Aanderaa Data Instruments, Bergen, Norway) |
Generic Instrument Name | Aanderaa Oxygen Optodes |
Dataset-specific Description | Dissolved oxygen: Optode (Aanderaa Data Instruments, Bergen, Norway) |
Generic Instrument Description | Aanderaa Oxygen Optodes are instrument for monitoring oxygen in the environment. For instrument information see the Aanderaa Oxygen Optodes Product Brochure. |
Dataset-specific Instrument Name | inlet mass spectrometer system (EIMS) |
Generic Instrument Name | Equilibrator Inlet Mass Spectrometer |
Dataset-specific Description | O2/Ar ratio: inlet mass spectrometer system (EIMS) |
Generic Instrument Description | Cassar N, Barnett BA, Bender ML, Kaiser J, Hamme RC, Tilbrook B., Continuous high-frequency dissolved O2/Ar measurements by equilibrator inlet mass spectrometry. Anal Chem. 2009 Mar 1;81(5):1855-64. doi: 10.1021/ac802300u.
Source: Department of Geosciences, Princeton University, Princeton, New Jersey 08544, USA. ncassar@princeton.edu
Abstract
The oxygen (O(2)) concentration in the surface ocean is influenced by biological and physical processes. With concurrent measurements of argon (Ar), which has similar solubility properties as oxygen, we can remove the physical contribution to O(2) supersaturation and determine the biological oxygen supersaturation. Biological O(2) supersaturation in the surface ocean reflects the net metabolic balance between photosynthesis and respiration, i.e., the net community productivity (NCP). We present a new method for continuous shipboard measurements of O(2)/Ar by equilibrator inlet mass spectrometry (EIMS). From these measurements and an appropriate gas exchange parametrization, NCP can be estimated at high spatial and temporal resolution. In the EIMS configuration, seawater from the ship's continuous intake flows through a cartridge enclosing a gas-permeable microporous membrane contactor. Gases in the headspace of the cartridge equilibrate with dissolved gases in the flowing seawater. A fused-silica capillary continuously samples headspace gases, and the O(2)/Ar ratio is measured by mass spectrometry. The ion current measurements on the mass spectrometer reflect the partial pressures of dissolved gases in the water flowing through the equilibrator. Calibration of the O(2)/Ar ion current ratio (32/40) is performed automatically every 2 h by sampling ambient air through a second capillary. A conceptual model demonstrates that the ratio of gases reaching the mass spectrometer is dependent on several parameters, such as the differences in molecular diffusivities and solubilities of the gases. Laboratory experiments and field observations performed by EIMS are discussed. We also present preliminary evidence that other gas measurements, such as N(2)/Ar and pCO(2) measurements, may potentially be performed with EIMS. Finally, we compare the characteristics of the EIMS with the previously described membrane inlet mass spectrometry (MIMS) approach.
PMID: 19193192 [PubMed - indexed for MEDLINE] |
Dataset-specific Instrument Name | C-Star, Sea-Bird Scientific |
Generic Instrument Name | WET Labs {Sea-Bird WETLabs} C-Star transmissometer |
Dataset-specific Description | Beam attenuation at 660 nm: (C-Star, Sea-Bird Scientific). |
Generic Instrument Description | The C-Star transmissometer has a novel monolithic housing with a highly intgrated opto-electronic design to provide a low cost, compact solution for underwater measurements of beam transmittance. The C-Star is capable of free space measurements or flow-through sampling when used with a pump and optical flow tubes. The sensor can be used in profiling, moored, or underway applications. Available with a 6000 m depth rating.
More information on Sea-Bird website: https://www.seabird.com/c-star-transmissometer/product?id=60762467717 |
Website | |
Platform | R/V Kilo Moana |
Start Date | 2017-09-01 |
End Date | 2017-09-26 |
NSF Award Abstract:
The rate of primary production in the ocean is fundamental to the ocean's food web and the movement of carbon from surface waters to the deep ocean, known as the biological pump. Yet spatial and temporal variations in primary productivity are poorly known because the effort required for the current method of measuring primary productivity is significant, limiting its application, and the method has biases that are difficult to quantify. Using a novel combination of approaches, the investigators will estimate daily primary productivity in the ocean at three ecologically distinct sites. The research will significantly improve understanding of primary productivity variations and their impact on the ocean's biological pump, which will benefit the broader ocean community involved in carbon cycle modeling and benefit society via the impact of ocean primary productivity on atmospheric carbon dioxide uptake and future climate change. The research results will be incorporated into both undergraduate and graduate course curricula and outreach talks at the two institutions. There will be active undergraduate student participation in the project at both Oregon State University and the University of Washington.
Within the last decade, an in-situ primary productivity method based on measuring the isotopic composition of dissolved oxygen (O2) gas has gained traction within the oceanographic community because it yields a primary production estimate from a simple water sample collection. This method has yielded basin-wide snapshots of primary productivity based on underway sampling of the surface ocean by ships of opportunity. However, accurate estimates of oxygen/particulate organic carbon (O2/POC) produced during primary productivity are needed to convert oxygen-based primary production rates to carbon production. In this project, daily in-situ rates of primary production in the surface ocean at three ocean sites will be estimated from continuous measurements of diurnal cycles in the oxygen/argon dissolved gas ratio and POC and compared to simultaneous in vitro primary productivity estimates. Variations in the O2/POC produced during primary production will be determined. Autonomous float-based estimates of primary production based on measurements of diurnal cycles in O2 and POC will be validated using ship based measurements. Estimates of primary production based on autonomous measurements resulting from this research have the potential to revolutionize our knowledge on the spatial and temporal variations in primary productivity in the ocean.
Funding Source | Award |
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NSF Division of Ocean Sciences (NSF OCE) | |
NSF Division of Ocean Sciences (NSF OCE) |