TEP and CSP particle concentrations from samples collected from Station ALOHA to 31ºN in the North Pacific in June 2021 on the R/V Kilo Moana cruise KM2108

Website: https://www.bco-dmo.org/dataset/968636
Data Type: Cruise Results
Version: 1
Version Date: 2025-07-15

Project
» Collaborative Research: Transparent exopolymer and phytoplankton vertical migration as sources for preformed nitrate anomalies in the subtropical N. Pacific Ocean (TEP and phytoplankton migration)
ContributorsAffiliationRole
Letscher, Robert T.University of New Hampshire (UNH)Principal Investigator
Curran, KieranUniversity of New Hampshire (UNH)Scientist
York, Amber D.Woods Hole Oceanographic Institution (WHOI BCO-DMO)BCO-DMO Data Manager

Abstract
These data include transparent exopolymer particle (TEP) and Coomassie stainable particle (CSP) concentrations within the upper 500 meters collected on a 12-day June 2021 cruise aboard the R/V Kilo Moana (KM2108) that visited Station ALOHA to 31 N nominally along 158 W in the subtropical North Pacific. Particle concentrations are measured spectrophotometrically using Alcian blue (TEP) and Coomassie blue (CSP) dyes and reported in the semi-quantitative concentration units of xanthan gum equivalents µg / L (TEP) and bovine albumen equivalents µg / L (CSP). Also included are total dissolved carbohydrate concentrations in µM C units, salinity, temperature, as well as oxygen, nitrate, silicate, phosphate, ammonium, dissolved organic phosphorus, dissolved organic nitrogen concentrations in µM units. These analyses are a contribution to the project, "Collaborative Research: Transparent exopolymer and phytoplankton vertical migration as sources for preformed nitrate anomalies in the subtropical N. Pacific Ocean" funded by the Chemical and Biological Oceanography Programs at NSF.


Coverage

Location: Station ALOHA 22.75 N 158 W to 31 N 156 W in the subtropical North Pacific Ocean, upper 500 meters depth
Spatial Extent: N:31 E:-156 S:22.45 W:-158
Temporal Extent: 2021-06-09 - 2021-06-15

Dataset Description

TEP = transparent exopolymer particle
CSP = Coomassie stainable particle
NPSG = North Pacific Subtropical Gyre
​Station ALOHA = Station ALOHA = Station ALOHA is the focal point of a range of oceanographic studies conducted over great temporal scale that intend to understand and explain the trends of the greater North Pacific Ocean.
NSF = National Science Foundation
TDP = ​ total dissolved phosphorus
TDN =  total dissolved nitrogen
GF/F = ​glass fiber filter 


Methods & Sampling

TEP and CSP particles were collected onto 0.4 µm polycarbonate filters from 1 liter each of whole water collected via the CTD/Rosette Niskin bottles into 1 L polycarbonate media bottles. Filtration was achieved using a peristaltic pump and silicone tubing through a 25 mm polycarbonate filter holder. Filters containing particles were immediately stained with Alcian blue (TEP) or Coomassie blue (CSP) dyes and stored frozen at -20degC until analysis on shore back at the University of New Hampshire. TEP and CSP particle concentrations were measured following the spectrophotometric method of Bittar et al. 2018 in Limnology & Oceanography Methods (doi:10.1002/lom3.10268) and standardized with xanthan gum and bovine albumen respectively. Total dissolved carbohydrates were measured using the spectrophotometric method of Myklestad et al. 1997 in Marine Chemistry (doi:10.1016/S0304-4203(96)00074-6). Seawater samples were previously filtered via gravity filtration and silicone tubing connected to Niskin bottles at sea, passed through a 47mm glass fiber filter (GF/F; 0.7 µm) held in a polycarbonate filter holder, into 40 mL glass EPA vials with silicone septa tops and frozen at -20degC until analysis on shore back at the University of New Hampshire. Temperature, salinity, fluorescence, and dissolved oxygen were measured by the ship's CTD sensor package on the downcast. Dissolved nitrate + nitrite, phosphate, silicate, and ammonium were measured by the University of Hawaii-Manoa's S-LAB using a Seal Analytical AA3 HR Nutrient Autoanalyzer using standard colorimetric protocols (https://www.soest.hawaii.edu/S-LAB/equipment/slab_autoanalyzer.htm). Dissolved organic phosphorus and dissolved organic nitrogen were computed after subtracting the relevant inorganic nutrient concentrations from the measured total dissolved phosphorus (TDP) and total dissolved nitrogen concentrations (TDN). TDP was measured using the ash-hydrolysis method of Solorzano and Sharp 1980 (doi:10.4319/lo.1980.25.4.0754) and TDN was measured by persulfate oxidation using the protocols within Knapp et al. 2005 (doi:10.1029/2004GB002320) with chemiluminescent detection of the resulting nitrate after reduction to NOx gas using the Braman and Hendrix 1989 method (Braman, R. S., & Hendrix, S. A. (1989, doi: 10.1021/ac00199a007); both at the University of New Hampshire.


BCO-DMO Processing Description

* Table within submitted file "KM2108.csv" was imported into the BCO-DMO data system for this dataset. Values "-999" imported as missing data values.   Table will appear as Data File: 968636_v1_tep_and_csp_npsg.csv (along with other download format options).

Missing Data Identifiers:
* In the BCO-DMO data system missing data identifiers are displayed according to the format of data you access. For example, in csv files it will be blank (null) values. In Matlab .mat files it will be NaN values. When viewing data online at BCO-DMO, the missing value will be shown as blank (null) values.

* Column names adjusted to conform to BCO-DMO naming conventions designed to support broad re-use by a variety of research tools and scripting languages. [Only numbers, letters, and underscores.  Can not start with a number]

* Date converted to ISO 8601 format

* trailing zeros added for lat lon to clarify precision for all values should be hundredths place. The data submitter explained the integers in the lat, lon columns not rounded to degree (e.g. -158 is precision 158.00).


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Data Files

File
968636_v1_tep_and_csp_npsg.csv
(Comma Separated Values (.csv), 173.03 KB)
MD5:e7631b268c533c1d9534524367fbf8ca
Primary data file for dataset ID 968636, version 1. TEP, CSP, total dissolved carbohydrates, DON, DOP, and nutrients measured in the North Pacific subtropical gyre north of Station ALOHA.

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Related Publications

Bittar, T. B., Passow, U., Hamaraty, L., Bidle, K. D., & Harvey, E. L. (2018). An updated method for the calibration of transparent exopolymer particle measurements. Limnology and Oceanography: Methods, 16(10), 621–628. doi:10.1002/lom3.10268
Methods
Braman, R. S., & Hendrix, S. A. (1989). Nanogram nitrite and nitrate determination in environmental and biological materials by vanadium(III) reduction with chemiluminescence detection. Analytical Chemistry, 61(24), 2715–2718. doi:10.1021/ac00199a007
Methods
Curran, K., Villareal, T., & Letscher, R. T. (2024). A time series analysis of transparent exopolymer particle distributions and C:N stoichiometry in the subtropical North Pacific: a key process in net community production and preformed nitrate anomalies? https://doi.org/10.5194/egusphere-2024-1416
Results
Knapp, A. N., Sigman, D. M., & Lipschultz, F. (2005). N isotopic composition of dissolved organic nitrogen and nitrate at the Bermuda Atlantic Time-series Study site. Global Biogeochemical Cycles, 19(1). doi:10.1029/2004gb002320
Methods
Myklestad, S. M., Skånøy, E., & Hestmann, S. (1997). A sensitive and rapid method for analysis of dissolved mono- and polysaccharides in seawater. Marine Chemistry, 56(3–4), 279–286. https://doi.org/10.1016/s0304-4203(96)00074-6 https://doi.org/10.1016/S0304-4203(96)00074-6
Methods
SOEST (2025). Equipment: Seal Analytical AA3 HR Nutrient Autoanalyzer. SOEST Laboratory for Analytical Biology. Accessed July 15th, 2025 from https://www.soest.hawaii.edu/S-LAB/equipment/slab_autoanalyzer.htm SealAnalyticalAA3HRNutrientAutoanalyzer
Methods
Solórzano, L., & Sharp, J. H. (1980). Determination of total dissolved phosphorus and particulate phosphorus in natural waters1. Limnology and Oceanography, 25(4), 754–758. doi:10.4319/lo.1980.25.4.0754
Methods

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Related Datasets

IsRelatedTo
Letscher, R. T., Curran, K. (2025) TEP and CSP particles collected from Station ALOHA for HOT time series during R/V Kilo Moana cruises from Jan 2020 to Sep 2022. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2025-07-15 doi:10.26008/1912/bco-dmo.968732.1 [view at BCO-DMO]
Relationship Description: These datasets were colleted as part of the same study and both include data from R/V Kilo Moana cruise KM2108.

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Parameters

ParameterDescriptionUnits
Cruise

Cruise identifier

unitless
Station

station identifier

unitless
Date

Date (ISO 8601 format)

unitless
Longitude

longitude

decimal degrees
Latitude

latitude

decimal degrees
Pressure

pressure

decibars (dbar)
Depth

Depth

meters (m)
Salinity

salinity

Practical Salinity Units (PSU)
Temperature

Temperature

degrees Celsius
Fluorescence

Fluorescence

relative fluorescence units (RFU)
Oxygen

Dissolved oxygen

micromolar (uM)
Total_Dissolved_Phosphorus

Total Dissolved Phosphorus (TDP)

micromolar (uM)
Phosphate

Phosphate (PO4)

micromolar (uM)
Dissolved_Organic_Phosphorus

Dissolved Organic Phosphorus (DOP)

micromolar (uM)
Silicate

Silicate

micromolar (uM)
Nitrate_plus_Nitrite

Nitrate + Nitrite (NO3+NO2)

micromolar (uM)
Total_Dissolved_Nitrogen

Total Dissolved Nitrogen (TDN)

micromolar (uM)
Dissolved_Organic_Nitrogen

Dissolved Organic Nitrogen (DON)

micromolar (uM)
Ammonium

Ammonium (NH4) concentration

micromolar (uM)
Transparent_Exopolymer_Particles

Transparent Exopolymer Particles

micrograms xanthan gum equivalents per liter (ug XG equiv./L)
Coomassie_Stainable_Particles

Coomassie Stainable Particles

micrograms bovine albumen equivalents per liter (ug BA equiv./L)
Total_Dissolved_Carbohydrates

Total Dissolved Carbohydrates

micromolar (uM C)


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Instruments

Dataset-specific Instrument Name
Thermo Scientific 42iQ NO-NO2-NOx Analyzer
Generic Instrument Name
Chemiluminescence NOx Analyzer
Generic Instrument Description
The chemiluminescence method for gas analysis of oxides of nitrogen relies on the measurement of light produced by the gas-phase titration of nitric oxide and ozone. A chemiluminescence analyzer can measure the concentration of NO/NO2/NOX. One example is the Teledyne Model T200: https://www.teledyne-api.com/products/nitrogen-compound-instruments/t200

Dataset-specific Instrument Name
Masterflex L/S MasterSense Peristaltic Pump
Generic Instrument Name
Pump
Generic Instrument Description
A pump is a device that moves fluids (liquids or gases), or sometimes slurries, by mechanical action. Pumps can be classified into three major groups according to the method they use to move the fluid: direct lift, displacement, and gravity pumps

Dataset-specific Instrument Name
Sea Bird SBE 3plus CTD Temperature Sensor
Generic Instrument Name
Sea-Bird SBE 3plus Temperature Sensor
Generic Instrument Description
The Sea-Bird SBE 3plus water temperature sensor is designed for use on the SBE 9plus CTD system. The sensor operates over the range -5 to +35 °C, a resolution of 0.0003 °C at 24 Hz and an initial accuracy of ± 0.001 °C. The typical sampling rate is 24 Hz, and the sensor has a depth rating of 6800 meters (aluminium housing) or 10500 meters (titanium housing).

Dataset-specific Instrument Name
Generic Instrument Name
Sea-Bird SBE 43 Dissolved Oxygen Sensor
Generic Instrument Description
The Sea-Bird SBE 43 dissolved oxygen sensor is a redesign of the Clark polarographic membrane type of dissolved oxygen sensors. more information from Sea-Bird Electronics

Dataset-specific Instrument Name
Generic Instrument Name
Sea-Bird SBE-4 Conductivity Sensor
Generic Instrument Description
The Sea-Bird SBE-4 conductivity sensor is a modular, self-contained instrument that measures conductivity from 0 to 7 Siemens/meter. The sensors (Version 2; S/N 2000 and higher) have electrically isolated power circuits and optically coupled outputs to eliminate any possibility of noise and corrosion caused by ground loops. The sensing element is a cylindrical, flow-through, borosilicate glass cell with three internal platinum electrodes. Because the outer electrodes are connected together, electric fields are confined inside the cell, making the measured resistance (and instrument calibration) independent of calibration bath size or proximity to protective cages or other objects.

Dataset-specific Instrument Name
Seal Analytical AA3 HR Nutrient Autoanalyzer
Generic Instrument Name
Seal Analytical AutoAnalyser 3HR
Generic Instrument Description
A fully automated Segmented Flow Analysis (SFA) system, ideal for water and seawater analysis. It comprises a modular system which integrates an autosampler, peristaltic pump, chemistry manifold and detector. The sample and reagents are pumped continuously through the chemistry manifold, and air bubbles are introduced at regular intervals forming reaction segments which are mixed using glass coils. The AA3 uses segmented flow analysis principles to reduce inter-sample dispersion, and can analyse up to 100 samples per hour using stable LED light sources.

Dataset-specific Instrument Name
Shimadzu UV-1800 Dual Beam UV-Vis Spectrophotometer
Generic Instrument Name
UV Spectrophotometer-Shimadzu
Generic Instrument Description
The Shimadzu UV Spectrophotometer is manufactured by Shimadzu Scientific Instruments (ssi.shimadzu.com). Shimadzu manufacturers several models of spectrophotometer; refer to dataset for make/model information.

Dataset-specific Instrument Name
Sea Bird ECO FL Fluorometer
Generic Instrument Name
Wet Labs ECO-AFL/FL Fluorometer
Generic Instrument Description
The Environmental Characterization Optics (ECO) series of single channel fluorometers delivers both high resolution and wide ranges across the entire line of parameters using 14 bit digital processing. The ECO series excels in biological monitoring and dye trace studies. The potted optics block results in long term stability of the instrument and the optional anti-biofouling technology delivers truly long term field measurements. more information from Wet Labs


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Deployments

KM2108

Website
Platform
R/V Kilo Moana
Start Date
2021-06-05
End Date
2021-06-16
Description
A 12-day June 2021 cruise aboard the R/V Kilo Moana (KM-2108) that visited Station ALOHA to 31 N nominally along 158 W in the subtropical North Pacific. Cruise information provided by Chief Scientist Robert Letscher as it was not yet available at R2R.


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Project Information

Collaborative Research: Transparent exopolymer and phytoplankton vertical migration as sources for preformed nitrate anomalies in the subtropical N. Pacific Ocean (TEP and phytoplankton migration)

Coverage: North Pacific Gyre, Hawaii Ocean Time-Series


NSF Award Abstract:
The ocean is usually layered, with light and oxygen in the warmer surface and nutrients at the cooler depths. Biological and physical processes determine this distribution. Marine algae grow in the well-lit upper layers but need nutrients to grow. However, in the subtropics, the ocean's largest biome, the relationship between oxygen and nitrate (a key nutrient required for photosynthesis) is different from expected. Two processes could explain this. Nutrients could be transported upward by migrating giant single-celled algae (phytoplankton). Another explanation is that the production of an organic material called transparent exopolymer (TEP) takes up carbon without using nutrients or exporting carbon to depth, as would occur in photosynthesis. While both processes could be occurring, the relative contribution of migrating phytoplankton versus TEP would tell us whether the observed oxygen pattern in the upper ocean results from photosynthesis. This problem relates to the general question of where and how nutrients reach the well-lit surface waters to enable photosynthesis. These hypotheses are tested at the Hawaii Ocean Time-Series using in-situ camera systems to image and quantify the giant phytoplankton and direct water samples to measure the vertical distribution of TEP. The data are entered into numerical models to calculate the nitrate to oxygen relationships and add information about the carbon cycle. In addition to training of undergraduate students and a postdoctoral fellow, the cruises provide an opportunity to prepare a cadre of communication fellows who will develop materials and media, including videos, to translate this highly complex scientific concepts for the general public. The social media campaign #SaveOur70 provides a valuable venue to reach and engage with the public.

Quantifying nutrient transport, utilization, and its relationship to carbon drawdown in the subtropical gyres is fundamental to our understanding of the carbon cycle. Geochemical distributions from the well-characterized time-series sites near Hawaii and Bermuda have long-served to identify previously unknown links between subsurface nitrate fields, summertime dissolved inorganic carbon (DIC) drawdown, and net community production in the absence of known nutrient sources. Two recently suggested processes rise to prominence to explain anomalies in subtropical distributions of dissolved carbon, oxygen, and nitrate in the upper ocean: 1) nutrient transport by giant phytoplankton that vertically migrate, and 2) cycling of low N organic matter between the mixed layer and the upper nutricline as transparent exopolymer particles (TEP) or gel-like organic material (GLOM). While linked at a fundamental level (phytoplankton are TEP producers), the outcome of the two processes are distinct. Vertical migration of phytoplankton is an active transport of nitrate, acquired in the nutricline, to the surface. There is an implication of subsequent reduction, photosynthetic carbon fixation and eventual export. TEP/GLOM cycling results in apparent DIC drawdown but there is no net export out of the surface layer and no requirement for additional nutrient sources in the mixed layer. This project collects the data to quantify the contribution of these two processes to the observed anomalies in nitrate to oxygen distribution at the time-series station at Hawaii (HOT). This is accomplished by enumerating the vertically migrating, aflagellate flora (VMF), implementing a 1-D model on vertical migration, and coupling these results with a 1-D model of the contribution of N-poor carbon cycling patterns in the upper water column derived from TEP and carbohydrate measurements. The combined VMF and TEP/GLOM 1-D models are used to model the dissolved oxygen, carbon, and nitrate budgets at HOT allowing for attribution of both hypothesized processes to the observed preformed nitrate distribution, its formation rate, and summertime inorganic carbon drawdown.



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Funding

Funding SourceAward
NSF Division of Ocean Sciences (NSF OCE)

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