Dataset: Multiyear RNA-Seq of Neocalanus flemingeri stages CV and Adult Female
View Data: Data not available yet
Data Citation:
Lenz, P. H., Roncalli, V. (2024) Multiyear RNA-Seq of Neocalanus flemingeri stages CV and Adult Female from the R/V Tiglax and R/V Sikuliaq in the Northern Gulf of Alaska from 2015-2022. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2024-04-05 [if applicable, indicate subset used]. http://lod.bco-dmo.org/id/dataset/922330 [access date]
Terms of Use
This dataset is licensed under Creative Commons Attribution 4.0.
If you wish to use this dataset, it is highly recommended that you contact the original principal investigators (PI). Should the relevant PI be unavailable, please contact BCO-DMO (info@bco-dmo.org) for additional guidance. For general guidance please see the BCO-DMO Terms of Use document.
Spatial Extent: N:60.8243 E:-145.424 S:56.2321 W:-149.72
Northern Gulf of Alaska
Temporal Extent: 2015-05-06 - 2022-05-06
Principal Investigator:
Petra H. Lenz (University of Hawaii at Manoa, PBRC)
Scientist:
Vittoria Roncalli (University of Hawaii at Manoa, PBRC)
Data Manager:
Matthew C. Cieslak (University of Hawaii at Manoa, PBRC)
BCO-DMO Data Manager:
Lynne M. Merchant (Woods Hole Oceanographic Institution, WHOI BCO-DMO)
Version:
1
Version Date:
2024-04-05
Restricted:
No
Validated:
No
Current State:
Preliminary and in progress
Multiyear RNA-Seq of Neocalanus flemingeri stages CV and Adult Female from the R/V Tiglax and R/V Sikuliaq in the Northern Gulf of Alaska from 2015-2022
Abstract:
High-throughput sequencing study of field-collected Neocalanus flemingeri pre-adults (stage CV) and adult females between 2015 and 2022. Dataset includes information and accession numbers of the raw sequence reads. Zooplankton collections were made in the northern Gulf of Alaska in collaboration with the Seward Long-term Monitoring Program and the northern Gulf of Alaska Long-term Ecological Research Program (LTER). Pre-adults were collected during the spring from multiple stations, sorted from net collections and immediately preserved. Adult females were collected mostly from Prince William Sound, but also on one occasion from the Gulf of Alaska. Adult females were collected in depth during diapause and preserved upon net retrieval. In addition, time series data were generated in three different years to characterize the post-diapause period through the spawning phase. The purpose of the data collection is to generate gene expression profiles during different years and seasons to evaluate developmental stage and physiological state.