Dataset: Sequence accessions: archaeal and bacterial clone libraries

Name: Sequence accession numbers for archaeal and bacterial clone libraries from Guaymas Basin sediments collected from R/V Atlantis cruise AT15-56 in 2009
Published: 2016-08-10
Keywords: oceans

Cite This Dataset

Project:

Constraints on microbial biogeography in hydrothermally active sediments of Guaymas Basin: Energetic limits, physical stressors, and upward compression of metabolic zones (Microbial Biogeo Guaymas)

Program:

Center for Dark Energy Biosphere Investigations (C-DEBI)

Principal Investigator:

Andreas Teske (University of North Carolina at Chapel Hill, UNC-Chapel Hill)

Student:

Luke McKay (University of Montana)

BCO-DMO Data Manager:

Shannon Rauch (Woods Hole Oceanographic Institution, WHOI BCO-DMO)

Version:

10 Aug 2016

Version Date:

2016-08-10

Restricted:

Validated:

Yes

Current State:

Final no updates expected

Sequence accession numbers for archaeal and bacterial clone libraries from Guaymas Basin sediments collected from R/V Atlantis cruise AT15-56 in 2009

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Description

Sequence accession numbers for archaeal and bacterial clone libraries from Guaymas Basin hydrothermal sediments (2000 m depth) collected on R/V Atlantis cruise, AT15-56.

Methods & Sampling

Hydrothermal sediments were sampled using HOV Alvin.

For complete acquisition and processing details, refer to:
McKay, L., et al. 2016. Thermal and geochemical influences on microbial biogeography in the hydrothermal sediments of Guaymas Basin, Gulf of California. Environmental Microbiology Reports, 8(1), 150-161. doi:10.1111/1758-2229.12365

Data Processing Description

Data Files

File
arch_bac_sequences.csv (Comma Separated Values (.csv), 103.28 KB) MD5:d862c3f487f1a75e622b2a7dd4e27bb2 Primary data file for dataset ID 653698

More Information about this dataset

Funding Sources

Funding Source	Award Number
NSF Division of Ocean Sciences	OCE-0647633
NSF Division of Ocean Sciences	OCE-0939564

Deployments

Deployment	Synonyms	Start Date	Platform	Investigator
AT15-56		2009-11-22	R/V Atlantis	Andreas Teske (Chief Scientist)	data info

Instruments

None available yet

Parameters

Date and time formats are described in python strftime() syntax.

Supplied Name	Supplied description	Supplied Units	Standard Name
sequence_type	Description of the type of sequence	unitless	sample_descrip
sample_location	Location where sample was collected	unitless	site_descrip
method	Sequencing method used	unitless	sampling_method
accession_num	NCBI accession number	unitless	accession_number
popset_num	NCBI Popset number	unitless	accession_number
closely_related_to	Description of closely related taxa	unitless	no_bcodmo_term
accession_link	Hyperlink to NCBI for the accession number	unitless	accession_number
popset_link	Hyperlink to NCBI for the Popset	unitless	accession_number

Status message

Database

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Dataset: Sequence accessions: archaeal and bacterial clone libraries