| Contributors | Affiliation | Role |
|---|---|---|
| Dawson, Michael N. | University of California-Merced (UC Merced) | Co-Principal Investigator |
| Schiebelhut, Lauren | Sunflower Star Lab | Co-Principal Investigator |
| Mickle, Audrey | Woods Hole Oceanographic Institution (WHOI BCO-DMO) | BCO-DMO Data Manager |
Tissues from 43 specimens of Pycnopodia helianthoides (urn:lsid:marinespecies.org:taxname:240764) were collected using SCUBA (Self-Contained Underwater Breathing Apparatus) from reference sites in British Columbia and Washington, and a recruit from Northern California. Specimens were collected between March 2022 and April 2025.
Specimens were located visually during recreational and/or scientific dives and during intertidal research or surveys conducted for other purposes. Tissues (tube feet or arm tips) were collected as incidental products of those dives and research. Tissues were sampled 1) subtidally by clipping tissue using clamps or scissors into a plastic bag while underwater, and then preserved in RNAlater or 100% EtOH when at the surface, or 2) intertidally by clipping tissue using scissors directly into a 2 ml vial of RNAlater or 100% EtOH. RNAlater samples were refrigerated overnight then placed in a -20C freezer. EtOH samples were placed in a -20C freezer.
Data were usually recorded in the field on water proof paper or dive slates and transferred to an excel spreadsheet by field collectors.
- Imported "SampleList4Upload.xlsx" into the BCO-DMO system
- Converted "DateCollected (DD/Mmm/YYYY)" to ISO date format in "DateCollected_ISO"
- Replaced spaces with underscores and removed special characters from the parameter names in keeping with BCO-DMO guidelines
- Replaced non-standard characters in "Baker’s Beach, Trinidad" with "Baker's Beach, Trinidad"
- Exported file as "986632_v1_sunflower_star_sample_list.csv"
All scientific names referenced were checked in the World Register of Marine Species (WoRMS) Taxon Match. All scientific names referenced are valid and accepted names as of 2025-11-12.
Pycnopodia helianthoides (urn:lsid:marinespecies.org:taxname:240764)
| Parameter | Description | Units |
| Species | Latin binomial | unitless |
| Number | Unique M0D# assigned to specimen on receipt at UCM lab | unitless |
| FieldNumber | Unique identifier assigned to specimen at time of collection in the field | unitless |
| Country | Country of origin | unitless |
| State_Province | State/Province of origin | unitless |
| Location_name | Full name of location | unitless |
| Latitude | Field-based GPS waypoint latitude | decimal degrees |
| Longitude | Field-based GPS waypoint longitude | decimal degrees |
| DateCollected | Date collected, (DD/Mmm/YYYY) | unitless |
| DateCollected_ISO | Date collected (ISO 8601 format) | unitless |
| Collector | Name(s) of collector(s) | unitless |
| General_notes | Any additional notes of interest | unitless |
| Depth | Depth at which the specimen was collected; should include a numerical depth and either 'ft' or 'm' unit as appropriate | feet or meters |
| Size | Size of specimen; includes a numerical size, the units (cm, mm), and the kind of measurement made (i.e. 'radius' [oral disc center to an ~average-sized arm tip] or 'diameter' [~average-sized arm tip to arm tip traversing across center of disc]); Value of "See photo for size" indicates that size is indicated in the photo | mm |
| Photo | TRUE if there is a photograph of the specimen | unitless |
| PhotoFileName | Filename(s) of photograph | unitless |
| Tissue | Tissue sampled for molecular analyses, e.g. tube foot, dermis, pyloric cecum, gonad, gut, coelomic fluid | unitless |
| RNAlater | TRUE if there is a tissue sample preserved in RNAlater | unitless |
| DNA | TRUE if extracted DNA sample exists | unitless |
| Habitat | Habitat or subhabitat type in which specimen was found, e.g. kelp forest, eelgrass, rocky intertidal, subtidal, etc, or a combination thereof; Eelgrass Bed (BED), Eelgrass Edge (EDG), Saccharina Bed (SAC), Sand Slope (SLP), Kelp Forest (KF), Urchin Barren (UB) | unitless |
| Substrate | Substrate on which specimen was found, e.g. kelp holdfast, rock (& rock type if known), etc | unitless |
| Phylum | Phylum name | unitless |
| Class | Class name | unitless |
| Order | Order name | unitless |
| Family | Family name | unitless |
| Genus | Genus name | unitless |
| Dataset-specific Instrument Name | GPS units |
| Generic Instrument Name | Global Positioning System Receiver |
| Dataset-specific Description | GPS units (various) |
| Generic Instrument Description | The Global Positioning System (GPS) is a U.S. space-based radionavigation system that provides reliable positioning, navigation, and timing services to civilian users on a continuous worldwide basis. The U.S. Air Force develops, maintains, and operates the space and control segments of the NAVSTAR GPS transmitter system. Ships use a variety of receivers (e.g. Trimble and Ashtech) to interpret the GPS signal and determine accurate latitude and longitude. |
| Dataset-specific Instrument Name | |
| Generic Instrument Name | Manual Biota Sampler |
| Dataset-specific Description | Specimens were located visually during recreational and/or scientific dives and during intertidal research or surveys conducted for other purposes. |
| Generic Instrument Description | "Manual Biota Sampler" indicates that a sample was collected in situ by a person, possibly using a hand-held collection device such as a jar, a net, or their hands. This term could also refer to a simple tool like a hammer, saw, or other hand-held tool. |
| Dataset-specific Instrument Name | SCUBA |
| Generic Instrument Name | Self-Contained Underwater Breathing Apparatus |
| Dataset-specific Description | Specimens were located visually during recreational and/or scientific dives and during intertidal research or surveys conducted for other purposes. |
| Generic Instrument Description | The self-contained underwater breathing apparatus or scuba diving system is the result of technological developments and innovations that began almost 300 years ago. Scuba diving is the most extensively used system for breathing underwater by recreational divers throughout the world and in various forms is also widely used to perform underwater work for military, scientific, and commercial purposes.
Reference: https://oceanexplorer.noaa.gov/technology/technical/technical.html |
NSF Award Abstract:
Many marine species are known for their large population sizes and high dispersal potential due to the time their larval offspring spend in the open ocean before settling into the adult habitat. Despite these characteristics, that often buffer against decimation, the sunflower sea star (Pycnopodia helianthoides) suffered major declines between 2013 and 2020 due to a disease outbreak and warming events, which led to listing by the IUCN as Critically Endangered. The sunflower star helps maintain ecological balance in kelp forest ecosystems; its absence across large swaths of its range has led to concerns for the future of the ecosystem. This loss has highlighted the need to better understand dispersal and recovery dynamics in this ecologically important species in a time when global change stressors are intensifying. The widespread loss of Pycnopodia — combined with recent sightings of new juveniles in the range where it’s been lost — created an opportunity to answer questions about the genetic relatedness among new colonists, source populations of colonists, patterns of gene expression, and associations with environmental factors, and their implications for the future of the species. The investigators are collaborating with a diverse team of partners already surveying the coast, to collect genetic information from new colonists. The research proposed here has direct and consequential impacts on conservation actions for Pycnopodia through ongoing collaborations with the Nature Conservancy and fills an important gap for future conservation decisions aimed at restoring this important member of the kelp forest ecosystem to its historical range. As more species come under threat from rapidly intensifying global change, understanding recovery dynamics is an important and necessary step in instigating conservation actions. The investigator is developing a teaching lesson for a nearby community college and an undergraduate student will be trained.
Massive demographic declines associated with anthropogenically-induced stressors have increased in recent years, raising questions about species’ ability to recover. The ecologically important sunflower sea star (Pycnopodia helianthoides) has suffered a precipitous (88–100%) decline since 2013 due to sea star wasting (SSW) disease and warming. The widespread loss of Pycnopodia provides a backdrop against which recent sightings of new juveniles in the extirpated range offer an opportunity to examine the contributions of four processes — (1) sweepstakes reproductive success, (2) cohesive dispersal, (3) larval cloning, and (4) allele surfing — to the evolutionary trajectory of populations following mass mortality. Additionally, identifying propagules’ source populations, evaluating gene expression profiles, and analyzing genotype–environment associations of colonists can help elucidate potential colonization pathways that favor recovery or signal ongoing threats. The investigators are soliciting new opportunistic collections of Pycnopodia from many partners and are responding to any observation in California and Oregon to acquire the samples and generate the whole genome resequencing data needed to test hypotheses segregating the aforementioned processes. As more species come under threat from rapidly intensifying global change, understanding recovery dynamics is critical to understanding population dynamics in the marine benthic environment.
| Funding Source | Award |
|---|---|
| NSF Division of Ocean Sciences (NSF OCE) |