Parameter: NCBI SRA Sample accession (SRS)

Short Description:

NCBI SRA Sample accession (SRS)

Short Name:

SRA_sample

Official Name:

SRA_sample

Description

The National Center for Biotechnology Information (NCBI) Sample accession number in the Sequence Read Archive (SRA).

A Sample in the SRA is an object that contains the metadata describing the physical sample upon which a sequencing experiment was performed. Imported from BioSample.

An experiment targets one or more samples. Results are expressed in terms of individual samples or bundles of samples as defined by the experiment.

The identifier usually begins with SRS

Datasets associated with this parameter

Dataset Name	Brief Description	Project	PI-Supplied Parameter Name
16S V4 rRNA gene tag sequences from reef seawater	16S V4 rRNA gene tag sequences from reef seawater	Quantitative coral microbiomes	SRA_Sample
Acropora cervicornis 16S Sequences Metadata and NCBI SRA accessions associated with Williams et al., 2022	Acropora cervicornis 16S Sequences Metadata and NCBI SRA accessions associated with Williams et al., 2022	Coral Rickettsiales, Resilient Acerv	SRA_Sample
Atlantic silverside RNA-seq reads		GenomAdapt	SRA
Evolve and re-sequence experiment - laboratory selection lines	Evolve and re-sequence experiment - laboratory selection lines	Evolutionary genomics of a copepod	SRA_Run
Evolve and re-sequence experiment - wild populations	Evolve and re-sequence experiment - wild populations	Evolutionary genomics of a copepod	SRA_Run
Gene expression of Eurytemora affinis (saline and freshwater)		Evolutionary genomics of a copepod	SRA
Juan de Fuca Viruses	Single Amplified Virus Genome sequence accessions at NCBI	Juan de Fuca Viruses	SRA
Microbial eukaryotic diversity: Mid-Cayman Rise SRA dataset	18S rRNA amplicon sequencing of microbial eukaryotes	Microbial eukaryotes at hydrothermal vents	Sample_Accession
Multiyear RNA-Seq of Neocalanus flemingeri stages CV and Adult Female	Multiyear RNA-Seq of Neocalanus flemingeri stages CV and Adult Female	Diapause preparation	Sample_Accession
NCBI accession numbers for RNAseq data from five coral species experimentally exposed to SCTLD	NCBI accession numbers for RNAseq data from five coral species experimentally exposed to SCTLD	Multi-Species Coral Disease	SRA_accession
RNAseq data used to identify viral genomes	Alphaflexivirus Genomes in Stony Coral Tissue Loss Disease-Affected, Disease-Exposed, and Disease-Unexposed Coral Colonies in the U.S. Virgin Islands	Multi-Species Coral Disease	SRA
T. rotula Common Garden Experiment	T. rotula Common Garden Experiment	Phytoplankton Community Responses	Sample_Accession
T. rotula microbiome global sample	T. rotula microbiome global sample	Diatom Gene Flow	SRA_Accession

Programs associated with this parameter

None

Database

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Parameter: NCBI SRA Sample accession (SRS)