Dataset: Line P virus sample log
Deployment: JPT_2009-09

Pacific Ocean Viral Line P metagenomes with depth, temperature and oxygen
Principal Investigator: 
Matthew Sullivan (University of Arizona, UA)
BCO-DMO Data Manager: 
Nancy Copley (Woods Hole Oceanographic Institution, WHOI BCO-DMO)
Current State: 
Final no updates expected
Deployment Synonyms:
Version Date: 

This dataset includes metadata for virus metagenome samples from the Line P transect, an Eastern North Pacific Ocean transect from Vancouver to Ocean Station Papa sampling at 10 to 2000 meters at stations P4 (48 N, 126W), P12 (48N, 130W), and P26 (50N, 144W).

All metagenomic sequences used in the analysis are available at CAMERA under the project accessions: CAM_P_0000915. "Pacific Ocean Virus (POV) Protein Clusters.

Relevant References:

Hurwitz, B.L., & Sullivan, M.B. (2013). The Pacific Ocean Virome (POV): A marine viral metagenomic dataset and associated protein clusters for quantitative viral ecology. PLoS One. 8(2), e57355. doi:10.1371/journal.pone.0057355.

Hurwitz, B.L., Hallam, S.J., & Sullivan, M.B. (2013). Metabolic reprogramming by viruses in the sunlit and dark ocean. Genome Biol. 14:R123. doi:10.1186/gb-2013-14-11-r123

Hurwitz, B.L., Brum, J.R., & Sullivan, M.B. (2014). Depth-stratified functional and taxonomic niche specialization in the ‘core’ and ‘flexible’ Pacific Ocean Virome. ISME J. doi:10.1038/ismej.2014.143

Hurwitz, B.L., Westveld, A.H., Brum, J.R., & Sullivan, M.B. (2014). Modeling ecological drivers in marine viral communities using comparative metagenomics and network analyses. PNAS. doi:10.1073/pnas.1319778111

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