Dataset: Kaneohe Bay RNA virus metagenomes
Deployment: KaneoheBay_Steward

Pyrosequencing reads (454) of marine RNA virus metagenomes
Principal Investigator: 
Grieg Steward (University of Hawaii at Manoa, SOEST)
Co-Principal Investigator: 
Dr Alexander Culley (University of Hawaii at Manoa, SOEST)
Dr Guylaine Poisson (University of Hawaii at Manoa, SOEST)
BCO-DMO Data Manager: 
Nancy Copley (Woods Hole Oceanographic Institution, WHOI BCO-DMO)
Diversity and ecology of marine RNA viruses (Diversity and ecology of marine RNA viruses)
Current State: 
Final no updates expected
Version Date: 

This datasest links to accessions at the iMicrobe data repository containing fasta formatted nucleic acid sequences. Samples are from Surface waters of Kaneohe Bay, a tropical embayment on eastern shore of Oahu, HI, 21° 25’ 46.80” N, 157° 47’ 31.51” W.

Sample Name: CAM_SMPL_000815 (collected Aug 1, 2009)

Sample Name: CAM_SMPL_000824 (collected Jun 3, 2010)

Related References:

Culley AI, JA Mueller, M Belcaid, EM Wood-Charlson, G Poisson, GF Steward (2104). The characterization of RNA viruses in tropical seawater using targeted PCR and metagenomics. mBio 5(3):e01210-14. doi:10.1128/mBio.01210-14.

Steward GF, AI Culley, JA Mueller, EM Wood-Charlson, M Belcaid, G Poisson (2013). Are we missing half the viruses in the sea? ISME Journal 7(3) 627-679.

More information about this dataset deployment