Dataset: SAR11_DOM_GIO15: AE1516 sample log

Name: Experimental results and survey of biogeochemical and microbial data collected on the R/V Atlantic Explorer (AE1516) at the Bermuda Atlantic Time-series study site during 2015 (Bacterial DOC cycling project)
Published: 2015-10-23
Keywords: biota, oceans

Cite This Dataset

DOI:10.1575/1912/bco-dmo.616269.1

Spatial Extent: N:32.4011 E:-64.48 S:32.078 W:-64.719

Temporal Extent: 2015-07 - 2015-07

Project:

Dissolved Organic Carbon Cycling by SAR11 Marine Bacteria (Bacterial DOC cycling)

Principal Investigator:

Stephen Giovannoni (Oregon State University, OSU)

BCO-DMO Data Manager:

Nancy Copley (Woods Hole Oceanographic Institution, WHOI BCO-DMO)

Version:

Version Date:

2015-10-23

Restricted:

Release Date:

2019-09-30

Validated:

Yes

Current State:

Final no updates expected

Experimental results and survey of biogeochemical and microbial data collected on the R/V Atlantic Explorer (AE1516) at the Bermuda Atlantic Time-series study site during 2015 (Bacterial DOC cycling project)

Abstract:

This dataset is a log of samples collected on AE1516 at the Bermuda Atlantic Time-series study site (BAT) Hydrostation S. The samples were analyzed for microbial diversity, dissolved organic carbon (DOC), total DOC, single celled genomics, and an osmolyte inculation experiment.

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Archival Copy

Version Date	Archive	Persistent Identifier (PID)	Date PID Issued
2015-10-23	Marine Biological Laboratory/Woods Hole Oceanographic Institution Library (MBLWHOI DLA)	10.1575/1912/bco-dmo.616269.1	2019-09-30

Description

Methods & Sampling

Methodology References:

Tangential flow filtration methods are described in Giovannoni, et al (1990).
Methods for DOM oxidation measurements are described in Sun, et al (2011).
Methods for rRNA gene diversity analysis are described in Vergin, et al (2013).
Methods for DOM analysis are described in Carini, et al (2014).

Data Files

File
sample_log_AE1516.csv (Comma Separated Values (.csv), 4.49 KB) MD5:80944ab03045916340b24031cc6b50a9 Primary data file for dataset ID 616269

More Information about this dataset

Funding Sources

Funding Source	Award Number
NSF Division of Ocean Sciences	OCE-1436865

Deployments

Deployment	Synonyms	Start Date	Platform	Investigator
AE1516	SAR11DOM AE1516-Giov15-1	2015-07-01	R/V Atlantic Explorer	Stephen Giovannoni (Chief Scientist) Craig A. Carlson (Co-Chief Scientist)	data info

Instruments

None available yet

Parameters

Date and time formats are described in python strftime() syntax.

Supplied Name	Supplied description	Supplied Units	Standard Name
cruise_id	cruise identification	unitless	cruise_id
sample_descrip	samples taken for this purpose	unitless	sample_descrip
date	date in yyyy-mm-dd format.	unitless	date
time	time; UTC or local?	hh:mm	time
person	person who handles the sample	unitless	person
depth	sample collection depth	meters	depth
sample_id	sample identification (date and depth); taken with PPL cartridge	unitless	sample
filtrand_id	filtrand identification (date and depth); from Sterivex filter	unitless	sample
TOC_id	total organic carbon sample id (date_time_depth); given to Craig Carlson for analysis	unitless	sample
sample_volume	sample volume filtered	milliliters	sample_volume
filter_size	filter pore size and membrane type	unitless	filter_size
preservation	preservative/buffer used	unitless	no_bcodmo_term
incubation	incubation period	hours	time_inc
temp_stored	temperature at which samples were stored	degrees Celsius	temp