Data Processing<\/strong>: The database for Emiliania huxleyi<\/em> was downloaded 2018-10-10 from Uniprot and concatenated with contaminants. Data was searched using Comet and protein inferences were completed with the TPP to generate pep.xml and prot.xml files.<\/p><\/div>","@type":"rdf:HTML"}],"http:\/\/purl.org\/dc\/terms\/identifier":[{"@value":"827928","@type":"xsd:int"}],"http:\/\/purl.org\/dc\/terms\/title":[{"@value":"Data Dependent Acquisition Proteomics"}],"http:\/\/purl.org\/dc\/terms\/date":[{"@value":"2020-10-29T14:50:10-04:00","@type":"xsd:dateTime"}],"http:\/\/purl.org\/dc\/terms\/created":[{"@value":"2020-10-29T14:50:10-04:00","@type":"xsd:dateTime"}],"http:\/\/purl.org\/dc\/terms\/modified":[{"@value":"2020-10-29T14:50:44-04:00","@type":"xsd:dateTime"}],"http:\/\/rdfs.org\/ns\/void#inDataset":[{"@id":"http:\/\/www.bco-dmo.org\/"}],"http:\/\/ocean-data.org\/schema\/namedGraph":[{"@value":"urn:bcodmo:dataset:827928","@type":"xsd:token"}],"http:\/\/ocean-data.org\/schema\/osprey_page":[{"@id":"https:\/\/www.bco-dmo.org\/dataset\/827928"}],"http:\/\/ocean-data.org\/schema\/identifier":[{"@value":"_:Identifier827928"}],"http:\/\/ocean-data.org\/schema\/datasetTitle":[{"@value":"Whole-cell data dependent mass spectrometry proteomic approach examining Emiliania Huxleyi exposed to 3 doses of HHQ","@language":"en-US"}],"http:\/\/ocean-data.org\/schema\/abstract":[{"@value":"Interactions between phytoplankton and bacteria play a central role in mediating oceanic biogeochemical cycling and microbial trophic structure in the ocean. The intricate relationships between these two domains of life are mediated via excreted molecules that facilitate communication and determine competitive outcomes. Yet, despite their predicted importance, identifying these secreted compounds and understanding their ecological significance has remained a challenge. \r\n\r\nA whole-cell data dependent mass spectrometry proteomic approach was used to identify phytoplankton proteins crucial in competitive interactions with bacterial infochemicals.","@language":"en-US"}],"http:\/\/purl.org\/dc\/terms\/rights":[{"@id":"https:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"http:\/\/ocean-data.org\/schema\/deprecated":[{"@value":"false","@type":"xsd:boolean"}],"http:\/\/purl.org\/dc\/terms\/bibliographicCitation":[{"@value":"Whalen, K. E. (2020) Whole-cell data dependent mass spectrometry proteomic approach examining Emiliania Huxleyi exposed to 3 doses of HHQ. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2020-10-29 [if applicable, indicate subset used]. http:\/\/lod.bco-dmo.org\/id\/dataset\/827928 [access date]","@type":"xsd:string"}],"http:\/\/ocean-data.org\/schema\/validated":[{"@value":"false","@type":"xsd:boolean"}],"http:\/\/ocean-data.org\/schema\/versionLabel":[{"@value":"1","@type":"xsd:string"}],"http:\/\/ocean-data.org\/schema\/currentState":[{"@id":"http:\/\/lod.bco-dmo.org\/id\/dataset-current-state\/6"}],"http:\/\/ocean-data.org\/schema\/nodcTopic":[{"@id":"http:\/\/lod.bco-dmo.org\/id\/nodc-dataset-topic\/156"}],"http:\/\/ocean-data.org\/schema\/restricted":[{"@value":"false","@type":"xsd:boolean"}],"http:\/\/ocean-data.org\/schema\/hasAward":[{"@id":"http:\/\/lod.bco-dmo.org\/id\/award\/709957"}],"http:\/\/ocean-data.org\/schema\/fromInstrument":[{"@id":"http:\/\/lod.bco-dmo.org\/id\/dataset-instrument\/827934"}],"http:\/\/ocean-data.org\/schema\/hasAgentWithRole":[{"@id":"http:\/\/lod.bco-dmo.org\/id\/person-role\/827931"},{"@id":"http:\/\/lod.bco-dmo.org\/id\/person-role\/827933"},{"@id":"http:\/\/lod.bco-dmo.org\/id\/person-role\/827935"}],"http:\/\/ocean-data.org\/schema\/hasDatasetURL":[{"@value":"https:\/\/www.bco-dmo.org\/dataset\/827928\/data","@type":"xsd:anyURI"}],"http:\/\/purl.org\/dc\/terms\/language":[{"@value":"http:\/\/id.loc.gov\/vocabulary\/iso639-1\/en","@type":"xsd:anyURI"}],"http:\/\/xmlns.com\/foaf\/0.1\/homepage":[{"@id":"https:\/\/www.bco-dmo.org\/dataset\/827928"}],"http:\/\/purl.org\/dc\/terms\/issued":[{"@value":"2020-10-29","@type":"xsd:date"}],"http:\/\/purl.org\/dc\/terms\/publisher":[{"@id":"http:\/\/lod.bco-dmo.org\/id\/affiliation\/191"}],"http:\/\/www.w3.org\/ns\/dcat#distribution":[{"@id":"http:\/\/lod.bco-dmo.org\/id\/dataset\/827928#dcatDistribution"}],"http:\/\/www.w3.org\/ns\/dcat#contactPoint":[{"@id":"http:\/\/lod.bco-dmo.org\/id\/person\/528931"}]},"_:html827928":{"@id":"_:html827928","@type":["http:\/\/ocean-data.org\/schema\/MetadataViewAffordance"],"http:\/\/schema.org\/subjectOf":[{"@id":"http:\/\/lod.bco-dmo.org\/id\/dataset\/827928"}],"http:\/\/schema.org\/name":[{"@value":"HTML","@type":"xsd:string"}],"http:\/\/ocean-data.org\/schema\/affordedBy":[{"@id":"http:\/\/lod.bco-dmo.org\/id\/affiliation\/191"}],"http:\/\/schema.org\/target":[{"@value":"_:html827928entryPoint"}]},"_:html827928entryPoint":{"@id":"_:html827928entryPoint","@type":["http:\/\/schema.org\/EntryPoint","http:\/\/ocean-data.org\/schema\/HtmlLandingPage"],"http:\/\/schema.org\/url":[{"@value":"https:\/\/www.bco-dmo.org\/dataset\/827928","@type":"xsd:anyURI"}],"http:\/\/schema.org\/contentType":[{"@value":"text\/html","@type":"xsd:token"}]},"_:frictionlessdata827928":{"@id":"_:frictionlessdata827928","@type":["http:\/\/ocean-data.org\/schema\/MetadataDownloadAffordance"],"http:\/\/schema.org\/subjectOf":[{"@id":"http:\/\/lod.bco-dmo.org\/id\/dataset\/827928"}],"http:\/\/schema.org\/name":[{"@value":"Datapackage.json","@type":"xsd:string"}],"http:\/\/schema.org\/alternateName":[{"@value":"Frictionless Data Package","@type":"xsd:string"}],"http:\/\/ocean-data.org\/schema\/affordedBy":[{"@id":"http:\/\/lod.bco-dmo.org\/id\/affiliation\/191"}],"http:\/\/schema.org\/target":[{"@value":"_:frictionlessdata827928entryPoint"}]},"_:frictionlessdata827928entryPoint":{"@id":"_:frictionlessdata827928entryPoint","@type":["http:\/\/schema.org\/EntryPoint"],"http:\/\/schema.org\/url":[{"@value":"https:\/\/www.bco-dmo.org\/dataset\/827928\/datapackage.json","@type":"xsd:anyURI"}],"http:\/\/schema.org\/contentType":[{"@value":"application\/vnd.datapackage+json","@type":"xsd:token"}]},"_:datasetdescription827928":{"@id":"_:datasetdescription827928","@type":["http:\/\/ocean-data.org\/schema\/MetadataDownloadAffordance"],"http:\/\/schema.org\/subjectOf":[{"@id":"http:\/\/lod.bco-dmo.org\/id\/dataset\/827928"}],"http:\/\/schema.org\/name":[{"@value":"PDF","@type":"xsd:string"}],"http:\/\/ocean-data.org\/schema\/affordedBy":[{"@id":"http:\/\/lod.bco-dmo.org\/id\/affiliation\/191"}],"http:\/\/schema.org\/target":[{"@value":"_:datasetdescription827928entryPoint"}]},"_:datasetdescription827928entryPoint":{"@id":"_:datasetdescription827928entryPoint","@type":["http:\/\/schema.org\/EntryPoint","http:\/\/ocean-data.org\/schema\/PdfDatasetDescription"],"http:\/\/schema.org\/url":[{"@value":"https:\/\/www.bco-dmo.org\/dataset\/827928\/Dataset_description.pdf","@type":"xsd:anyURI"}],"http:\/\/schema.org\/contentType":[{"@value":"application\/pdf","@type":"xsd:token"}]},"_:json827928":{"@id":"_:json827928","@type":["http:\/\/ocean-data.org\/schema\/MetadataDownloadAffordance"],"http:\/\/schema.org\/subjectOf":[{"@id":"http:\/\/lod.bco-dmo.org\/id\/dataset\/827928"}],"http:\/\/schema.org\/name":[{"@value":"JSON-LD","@type":"xsd:string"}],"http:\/\/ocean-data.org\/schema\/affordedBy":[{"@id":"http:\/\/lod.bco-dmo.org\/id\/affiliation\/191"}],"http:\/\/schema.org\/target":[{"@value":"_:json827928entryPoint"}]},"_:json827928entryPoint":{"@id":"_:json827928entryPoint","@type":["http:\/\/schema.org\/EntryPoint"],"http:\/\/schema.org\/url":[{"@value":"https:\/\/www.bco-dmo.org\/dataset\/827928.json","@type":"xsd:anyURI"}],"http:\/\/schema.org\/contentType":[{"@value":"application\/ld+json","@type":"xsd:token"}]},"_:ttl827928":{"@id":"_:ttl827928","@type":["http:\/\/ocean-data.org\/schema\/MetadataDownloadAffordance"],"http:\/\/schema.org\/subjectOf":[{"@id":"http:\/\/lod.bco-dmo.org\/id\/dataset\/827928"}],"http:\/\/schema.org\/name":[{"@value":"Turtle","@type":"xsd:string"}],"http:\/\/ocean-data.org\/schema\/affordedBy":[{"@id":"http:\/\/lod.bco-dmo.org\/id\/affiliation\/191"}],"http:\/\/schema.org\/target":[{"@value":"_:ttl827928entryPoint"}]},"_:ttl827928entryPoint":{"@id":"_:ttl827928entryPoint","@type":["http:\/\/schema.org\/EntryPoint"],"http:\/\/schema.org\/url":[{"@value":"https:\/\/www.bco-dmo.org\/dataset\/827928.ttl","@type":"xsd:anyURI"}],"http:\/\/schema.org\/contentType":[{"@value":"text\/turtle","@type":"xsd:token"}]},"_:rdf827928":{"@id":"_:rdf827928","@type":["http:\/\/ocean-data.org\/schema\/MetadataDownloadAffordance"],"http:\/\/schema.org\/subjectOf":[{"@id":"http:\/\/lod.bco-dmo.org\/id\/dataset\/827928"}],"http:\/\/schema.org\/name":[{"@value":"RDF\/XML","@type":"xsd:string"}],"http:\/\/ocean-data.org\/schema\/affordedBy":[{"@id":"http:\/\/lod.bco-dmo.org\/id\/affiliation\/191"}],"http:\/\/schema.org\/target":[{"@value":"_:rdf827928entryPoint"}]},"_:rdf827928entryPoint":{"@id":"_:rdf827928entryPoint","@type":["http:\/\/schema.org\/EntryPoint"],"http:\/\/schema.org\/url":[{"@value":"https:\/\/www.bco-dmo.org\/dataset\/827928.rdf","@type":"xsd:anyURI"}],"http:\/\/schema.org\/contentType":[{"@value":"application\/rdf+xml","@type":"xsd:token"}]},"_:iso827928":{"@id":"_:iso827928","@type":["http:\/\/ocean-data.org\/schema\/MetadataDownloadAffordance"],"http:\/\/schema.org\/subjectOf":[{"@id":"http:\/\/lod.bco-dmo.org\/id\/dataset\/827928"}],"http:\/\/schema.org\/name":[{"@value":"ISO 19115-2 (NOAA Profile)","@type":"xsd:string"}],"http:\/\/ocean-data.org\/schema\/affordedBy":[{"@id":"http:\/\/lod.bco-dmo.org\/id\/affiliation\/191"}],"http:\/\/schema.org\/target":[{"@value":"_:iso827928entryPoint"}]},"_:iso827928entryPoint":{"@id":"_:iso827928entryPoint","@type":["http:\/\/schema.org\/EntryPoint","http:\/\/ocean-data.org\/schema\/ISOMetadata"],"http:\/\/schema.org\/url":[{"@value":"https:\/\/www.bco-dmo.org\/dataset\/827928\/iso","@type":"xsd:anyURI"}],"http:\/\/schema.org\/contentType":[{"@value":"application\/xml","@type":"xsd:token"}],"http:\/\/purl.org\/dc\/terms\/conformsTo":[{"@value":"http:\/\/www.isotc211.org\/2005\/gmd-noaa","@type":"xsd:anyURI"}]},"_:dublincore827928":{"@id":"_:dublincore827928","@type":["http:\/\/ocean-data.org\/schema\/MetadataDownloadAffordance"],"http:\/\/schema.org\/subjectOf":[{"@id":"http:\/\/lod.bco-dmo.org\/id\/dataset\/827928"}],"http:\/\/schema.org\/name":[{"@value":"Dublin Core","@type":"xsd:string"}],"http:\/\/ocean-data.org\/schema\/affordedBy":[{"@id":"http:\/\/lod.bco-dmo.org\/id\/affiliation\/191"}],"http:\/\/schema.org\/target":[{"@value":"_:dublincore827928entryPoint"}]},"_:dublincore827928entryPoint":{"@id":"_:dublincore827928entryPoint","@type":["http:\/\/schema.org\/EntryPoint"],"http:\/\/schema.org\/url":[{"@value":"https:\/\/www.bco-dmo.org\/dataset\/827928\/dublin-core","@type":"xsd:anyURI"}],"http:\/\/schema.org\/contentType":[{"@value":"application\/xml","@type":"xsd:token"}],"http:\/\/purl.org\/dc\/terms\/conformsTo":[{"@value":"http:\/\/purl.org\/dc\/elements\/1.1\/","@type":"xsd:anyURI"}]},"_:Identifier827928":{"@id":"_:Identifier827928","@type":["http:\/\/ocean-data.org\/schema\/Identifier","http:\/\/ocean-data.org\/schema\/BCODMOIdentifier","http:\/\/ocean-data.org\/schema\/OSPREY_v2_Node_dataset"],"http:\/\/ocean-data.org\/schema\/identifierScheme":[{"@id":"http:\/\/ocean-data.org\/schema\/IdentifierScheme_BCODMO_Version_2"}],"http:\/\/ocean-data.org\/schema\/identifierValue":[{"@value":"827928","@type":"xsd:token"}],"http:\/\/ocean-data.org\/schema\/resolvableURL":[{"@value":"http:\/\/lod.bco-dmo.org\/id\/dataset\/827928","@type":"xsd:anyURI"}]},"_:downloadURLentryPoint827928":{"@id":"_:downloadURLentryPoint827928","@type":["http:\/\/schema.org\/EntryPoint"],"http:\/\/ocean-data.org\/schema\/redirectURL":[{"@value":"https:\/\/www.bco-dmo.org\/dataset\/827928\/data\/download","@type":"xsd:anyURI"}],"http:\/\/schema.org\/url":[{"@value":"https:\/\/www.ebi.ac.uk\/pride\/archive\/projects\/PXD011559","@type":"xsd:anyURI"}],"http:\/\/schema.org\/contentType":[{"@value":"application\/octet-stream","@type":"xsd:token"}]},"_:downloadURLAffordance827928":{"@id":"_:downloadURLAffordance827928","@type":["http:\/\/ocean-data.org\/schema\/DataDownloadAffordance"],"http:\/\/schema.org\/subjectOf":[{"@id":"http:\/\/lod.bco-dmo.org\/id\/dataset\/827928"}],"http:\/\/schema.org\/name":[{"@value":"Download","@type":"xsd:string"}],"http:\/\/schema.org\/target":[{"@value":"_:downloadURLentryPoint827928"}]},"http:\/\/lod.bco-dmo.org\/id\/dataset\/827928#dcatDistribution":{"@id":"http:\/\/lod.bco-dmo.org\/id\/dataset\/827928#dcatDistribution","@type":["http:\/\/www.w3.org\/ns\/dcat#Distribution"],"http:\/\/purl.org\/dc\/terms\/title":[{"@value":"Data Dependent Acquisition Proteomics"}],"http:\/\/purl.org\/dc\/terms\/modified":[{"@value":"2020-10-29T14:50:44-04:00","@type":"xsd:dateTime"}],"http:\/\/purl.org\/dc\/terms\/issued":[{"@value":"2020-10-29","@type":"xsd:date"}],"http:\/\/www.w3.org\/ns\/dcat#downloadURL":[{"@id":"https:\/\/www.bco-dmo.org\/dataset\/827928\/data\/download"}],"http:\/\/www.w3.org\/ns\/dcat#mediaType":[{"@value":"application\/octet-stream","@type":"xsd:string"}]},"https:\/\/www.bco-dmo.org\/dataset\/827928\/data\/download":{"@id":"https:\/\/www.bco-dmo.org\/dataset\/827928\/data\/download","@type":["http:\/\/purl.org\/dc\/terms\/FileFormat"],"http:\/\/purl.org\/dc\/terms\/format":[{"@value":"application\/octet-stream","@type":"xsd:string"}],"http:\/\/www.w3.org\/2000\/01\/rdf-schema#seeAlso":[{"@value":"https:\/\/www.bco-dmo.org\/dataset\/827928\/data\/download","@type":"xsd:anyURI"}]}}]}