| Data File(s) | Type | Description | Action |
|---|---|---|---|
940735_v1_depalldata.csv (50.06 KB) | Comma Separated Values (.csv) | Primary data file for dataset ID 940735, version 1 | |
| Supplemental File(s) | Type | Description | Action |
MATLABscripts/FTC_2_data_processing.m (10.78 KB) | MATLAB Programming Script (.m) | This script plots HOBO data from flow-through chamber setup (ambient and each of the 5 chambers) and calculates sediment oxygen demand (SOD). The user can select to either auto-calculate or manually calculate SOD. Whichever method is chosen, this process must be done for each of the chambers, changing variable names to append data as you go. Data is not imported through the code, since some forma... Show more | |
MATLABscripts/FTC_3_data_filtration.m (11.36 KB) | MATLAB Programming Script (.m) | This script takes the output from the previous script (FTC_2_data_processing) and filters out SOD data according to certain thresholds - lower limit of oxygen depletion as percent dissolved oxygen, lower useable time limit, a positive slope, and r-squared value. IMPORT AND FORMAT CHAMBER AND AMBIENT DATA – same function as previous scripts Following sections must be run sequentially for each cha... Show more | |
MATLABscripts/FTC_1_viewdata.m (5.00 KB) | MATLAB Programming Script (.m) | Script to view flow-through chamber data and relevant environmental parameters. Data is not imported through the code, since some format changes must be made and it is easier to do so through the Matlab file importer tool. It is advised that users run the script in sections demarcated within the script to check proper functioning of code and array format. Once the data files have been imported to ... Show more | |
MATLABscripts/FTC_4_data_consolidation.m (2.77 KB) | MATLAB Programming Script (.m) | This script reorganizes and consolidates sediment oxygen demand (SOD) and Ambient data from a given deployment into separate tables named for the associated deployment. Must be run for each deployment separately. MAKE AMBIENT TABLE – makes a new table for ambient HOBO DO data with each row a DO measurement and the columns the date and time in matlab datetime format (DandT), the elapsed time from ... Show more | |
MATLABscripts/FTC_5_data_analysis.m (16.85 KB) | MATLAB Programming Script (.m) | Script for consolidated data analysis using three tables from each deployment. Sections should be run independently. Made a table called DepAllData that contains the combined data tables from all of the deployments. Added a column to the table denoting a sample number. Samples numbered in ascending deployment and chamber order. All incubations from the same chamber in the same deployment have the... Show more |
Files
Type: Comma Separated Values (.csv)
Primary data file for dataset ID 940735, version 1
Supplemental Files
Type: MATLAB Programming Script (.m)
This script plots HOBO data from flow-through chamber setup (ambient and each of the 5 chambers) and calculates sediment oxygen demand (SOD). The user can select to either auto-calculate or manually calculate SOD. Whichever method is chosen, this pro...
Show moreType: MATLAB Programming Script (.m)
This script takes the output from the previous script (FTC_2_data_processing) and filters out SOD data according to certain thresholds - lower limit of oxygen depletion as percent dissolved oxygen, lower useable time limit, a positive slope, and r-sq...
Show moreType: MATLAB Programming Script (.m)
Script to view flow-through chamber data and relevant environmental parameters. Data is not imported through the code, since some format changes must be made and it is easier to do so through the Matlab file importer tool. It is advised that users ru...
Show moreType: MATLAB Programming Script (.m)
This script reorganizes and consolidates sediment oxygen demand (SOD) and Ambient data from a given deployment into separate tables named for the associated deployment. Must be run for each deployment separately. MAKE AMBIENT TABLE – makes a new tab...
Show moreType: MATLAB Programming Script (.m)
Script for consolidated data analysis using three tables from each deployment. Sections should be run independently. Made a table called DepAllData that contains the combined data tables from all of the deployments. Added a column to the table denot...
Show more