| Data File(s) | Type | Description | Action |
|---|---|---|---|
957899_v1_palau_transect_microsats.csv (28.60 KB) | Comma Separated Values (.csv) | Primary data file for dataset ID 957899, version 1. Multilocus genotypes from tagged colonies. Microsatellite loci are listed across the top with the corresponding allele sizes below. Genotype profiles are listed for a coral colony over its 35-month observation period which includes all alleles recovered in a single sample. In contrast, single multilocus genotypes represent alleles originating from only one symbiont clone. Single multilocus genotypes were deduced and then extracted (based on alleles found in isolation) from the genotype profiles and are provided below. | |
| Supplemental File(s) | Type | Description | Action |
Palau_LSU_cob_Clade_C_transect_diversity.nex (159.35 KB) | Plain Text | Nexus file for maximum parsimony phylogeny reconstruction showing the symbiodiniacean diversity found in colonies representing 21 genera and ~50 species from all three transects. The phylogenic reconstruction was based on of the mitochondrial cob, ITS2, and partial LSU gene sequences (combined alignments representing ~1959 bases). | |
Table_S1_host_symbiont_tagged_colonies.pdf (261.00 KB) | Portable Document Format (.pdf) | PDF version of Table S1. Host and symbiont identities among tagged colonies from three transects first sampled in August 2013. Host identification based on morphology while symbiont was based on a combination of partial ITS2-DGGE profiling as well as LSU and psbAncr sequencing. The presence of a second co-dominant symbiont is indicated when observed. | |
palau_hobo_temps_offshore_2013_2022.csv (268.87 KB) | Comma Separated Values (.csv) | Temperature Data for 2013–2022. HOBO temperature logger was from Ulong Rock location. NOAA satellite temperature data obtained from: https://coralreefwatch.noaa.gov/product/vs/gauges/palau.php. | |
table_s1_host_symbiont_tagged_colonies.csv (6.52 KB) | Comma Separated Values (.csv) | Table S1. Host and symbiont identities among tagged colonies from three transects first sampled in August 2013. Host identification based on morphology while symbiont was based on a combination of partial ITS2-DGGE profiling as well as LSU and psbAncr sequencing. The presence of a second co-dominant symbiont is indicated when observed. |
Files
Filename: 957899_v1_palau_transect_microsats.csv (28.60 KB)
Type: Comma Separated Values (.csv)
Description: Primary data file for dataset ID 957899, version 1. Multilocus genotypes from tagged colonies. Microsatellite loci are listed across the top with the corresponding allele sizes below. Genotype profiles are listed for a coral colony over its 35-month observation period which includes all alleles recovered in a single sample. In contrast, single multilocus genotypes represent alleles originating from only one symbiont clone. Single multilocus genotypes were deduced and then extracted (based on alleles found in isolation) from the genotype profiles and are provided below.
Type: Comma Separated Values (.csv)
Description: Primary data file for dataset ID 957899, version 1. Multilocus genotypes from tagged colonies. Microsatellite loci are listed across the top with the corresponding allele sizes below. Genotype profiles are listed for a coral colony over its 35-month observation period which includes all alleles recovered in a single sample. In contrast, single multilocus genotypes represent alleles originating from only one symbiont clone. Single multilocus genotypes were deduced and then extracted (based on alleles found in isolation) from the genotype profiles and are provided below.
Supplemental Files
Filename: Palau_LSU_cob_Clade_C_transect_diversity.nex (159.35 KB)
Type: Plain Text
Description: Nexus file for maximum parsimony phylogeny reconstruction showing the symbiodiniacean diversity found in colonies representing 21 genera and ~50 species from all three transects. The phylogenic reconstruction was based on of the mitochondrial cob, ITS2, and partial LSU gene sequences (combined alignments representing ~1959 bases).
Type: Plain Text
Description: Nexus file for maximum parsimony phylogeny reconstruction showing the symbiodiniacean diversity found in colonies representing 21 genera and ~50 species from all three transects. The phylogenic reconstruction was based on of the mitochondrial cob, ITS2, and partial LSU gene sequences (combined alignments representing ~1959 bases).
Filename: Table_S1_host_symbiont_tagged_colonies.pdf (261.00 KB)
Type: Portable Document Format (.pdf)
Description: PDF version of Table S1. Host and symbiont identities among tagged colonies from three transects first sampled in August 2013. Host identification based on morphology while symbiont was based on a combination of partial ITS2-DGGE profiling as well as LSU and psbAncr sequencing. The presence of a second co-dominant symbiont is indicated when observed.
Type: Portable Document Format (.pdf)
Description: PDF version of Table S1. Host and symbiont identities among tagged colonies from three transects first sampled in August 2013. Host identification based on morphology while symbiont was based on a combination of partial ITS2-DGGE profiling as well as LSU and psbAncr sequencing. The presence of a second co-dominant symbiont is indicated when observed.
Filename: palau_hobo_temps_offshore_2013_2022.csv (268.87 KB)
Type: Comma Separated Values (.csv)
Description: Temperature Data for 2013–2022. HOBO temperature logger was from Ulong Rock location. NOAA satellite temperature data obtained from: https://coralreefwatch.noaa.gov/product/vs/gauges/palau.php.
Type: Comma Separated Values (.csv)
Description: Temperature Data for 2013–2022. HOBO temperature logger was from Ulong Rock location. NOAA satellite temperature data obtained from: https://coralreefwatch.noaa.gov/product/vs/gauges/palau.php.
Filename: table_s1_host_symbiont_tagged_colonies.csv (6.52 KB)
Type: Comma Separated Values (.csv)
Description: Table S1. Host and symbiont identities among tagged colonies from three transects first sampled in August 2013. Host identification based on morphology while symbiont was based on a combination of partial ITS2-DGGE profiling as well as LSU and psbAncr sequencing. The presence of a second co-dominant symbiont is indicated when observed.
Type: Comma Separated Values (.csv)
Description: Table S1. Host and symbiont identities among tagged colonies from three transects first sampled in August 2013. Host identification based on morphology while symbiont was based on a combination of partial ITS2-DGGE profiling as well as LSU and psbAncr sequencing. The presence of a second co-dominant symbiont is indicated when observed.