Parameter: coccus_s_cyt

Short Description: synechococcus abundance from flow cytometry
Short Name: coccus_s_cyt
Official Name: coccus_s_cyt
Units: cells/milliliter
No Data Value: nd
External Identifiers:
skos:exactMatch: http://vocab.nerc.ac.uk/collection/P09/current/PCEF/
skos:exactMatch: http://vocab.nerc.ac.uk/collection/P01/current/P700A90Z/

Description

Number of cells identified as Synechococcus per unit volume of the water body measured by flow cytometry.

Alternate labels:
PCEF
P700AF


DatasetPI-Supplied DescriptionPI-Supplied Name
Core data from R/V Kilo Moana KM0715, KM0817, KM0704, KM0814 in the North Pacific Subtropical Gyre north of Hawaii, and from Suva Fiji to Honolulu to Port Hueneme CA from 2007-2008 (C-MORE project)synechococcus abundance; cytometry coccus_s_cyt
Diel multi 'omics data from surface ocean microbial community samples collected during Hawaiʻi Diel Sampling (HaDS) in Kāneʻohe Bay and adjacent offshore waters of Oʻahu, Hawaiʻi from December 2020 to August 2021Surface seawater cellular abundances of Synechococcus cells counted on CytoFLEX S flow cytometer. SYN_mL
Incubation experiments were conducted in St. John, US Virgin Islands to investigate the response of reef seawater microbial communities to the mixed exudates released from the coral species Porites astreoides and Gorgonia ventalina.Synechococcus abundance Synechococcus
Flow cytometer cell counts from R/V Kilo Moana KM1513 (HOE-LEGACY 2A ) near Hawaii (22.75 N, 158 W) from July to August 2015 (C-MORE project, SCOPE project)synechococcus abundance; cytometry coccus_s_cyt
Niskin bottle water samples and associated CTD measurements from the Hawaii Ocean Time-Series cruises from 1988-2023Bacteria: Synechococcus S_BACT
Biological oceanographic measurements, 16S rRNA gene amplicons and metagenomes from surface seawater taken from August 2017 to June 2021 at sites within and adjacent to Kāneʻohe Bay, Oʻahu, HawaiʻiSurface seawater cellular abundances of Prochlorocococcus cells counted on CytoFLEX S flow cytometer. Prochlorococcus_cells_per_mL
Biological oceanographic measurements, 16S rRNA gene amplicons and metagenomes from surface seawater taken from August 2017 to June 2021 at sites within and adjacent to Kāneʻohe Bay, Oʻahu, HawaiʻiSurface seawater cellular abundances of Synechococcus cells counted on CytoFLEX S flow cytometer. Synechococcus_cells_per_mL
Incubation experiments were conducted in St. John, US Virgin Islands to investigate the response of reef seawater microbial communities to the specific metabolites riboflavin, pantothenic acid, and caffeine.Synechococcus abundance Synechococcus
Microbial abundance of phytoplankton and bacteria from RV/Tangaroa cruise TAN1810SALP to Chatham Rise vicinity, east of New Zealand, Oct - Nov. 2018Synechococcus abundance determined via preserved shore-based flow cytometry SYN
Depth profile data from R/V New Horizons NH1418 in the tropical Pacific from Sept-Oct. 2014Synechococcus concentration Synechococcus
Niskin bottle hydrography from the CTD rosette from cruises KN193-03, B4-2008, B9-2008, and B10-2008 from the subpolar North Atlantic and Iceland Basin in 2008 (NAB 2008 project)Synechococcus abundance coccus_s_cyt
Sponge mesocosm data testing effects of temperature and dissolved oxygen on sponge filtration from experiments conductedShort for 'Synechococcus' this the total number of 'events' of Synechococcus cells as determined by the Flow cytometer and Flowjo software for that sample extracted from the osculum of the subject after exposure to treatment conditions. Syn
Sponge mesocosm data testing effects of temperature and dissolved oxygen on sponge filtration from experiments conductedThe total number of 'events' of Synechococcus in the head tank sample prior to exposure to sponge subjects. Syn_head
Weekly surface water samples from Newport Pier, CA collected between 11 January 2012 and 3 November 2023Synechococcus concentration Synconc_ml