| 16S rRNA gene amplicon sequences metadata collected from water samples and biofilms on mineral substrates deployed in the Lau Basin (Tonga) during R/V Thompson cruise TN401 from Mar to Apr 2022 | Technology used for sequencing
| Sequencing_technologies |
| Acropora cervicornis 16S rRNA sequence metadata: nutrient- and disease-exposed from samples collected at Mote Marine Laboratory in situ nursery from June to July 2022 | Description explaining how this library was prepared and sequenced
| design_description |
| Acropora cervicornis 16S rRNA sequence metadata: nutrient- and disease-exposed from samples collected at Mote Marine Laboratory in situ nursery from June to July 2022 | single or paired end sequencing reads
| library_layout |
| Acropora cervicornis 16S rRNA sequence metadata: nutrient- and disease-exposed from samples collected at Mote Marine Laboratory in situ nursery from June to July 2022 | Selection used for sequencing library
| library_selection |
| Acropora cervicornis 16S rRNA sequence metadata: nutrient- and disease-exposed from samples collected at Mote Marine Laboratory in situ nursery from June to July 2022 | Source of sequencing library
| library_source |
| Acropora cervicornis 16S rRNA sequence metadata: nutrient- and disease-exposed from samples collected at Mote Marine Laboratory in situ nursery from June to July 2022 | Sequencing library strategy
| library_strategy |
| Acropora cervicornis 16S rRNA sequence metadata: nutrient- and disease-exposed from samples collected at Mote Marine Laboratory in situ nursery from June to July 2022 | Library title
| title |
| Transcriptome and viral metagenome data from Diadema antillarum collected at St. Thomas (USVI) and Saba (Caribbean Netherlands) in Apr 2022 | Brief description of how libraries were prepared from source material
| design_description |
| Transcriptome and viral metagenome data from Diadema antillarum collected at St. Thomas (USVI) and Saba (Caribbean Netherlands) in Apr 2022 | Description of sequencing reads: paired
| library_layout |
| Transcriptome and viral metagenome data from Diadema antillarum collected at St. Thomas (USVI) and Saba (Caribbean Netherlands) in Apr 2022 | How libraries were prepared for sequencing: size selected or random
| library_selection |
| Transcriptome and viral metagenome data from Diadema antillarum collected at St. Thomas (USVI) and Saba (Caribbean Netherlands) in Apr 2022 | Source of sequencing library: Transcriptome or Metagenome
| library_source |
| Transcriptome and viral metagenome data from Diadema antillarum collected at St. Thomas (USVI) and Saba (Caribbean Netherlands) in Apr 2022 | Sequencing library strategy: RNA-Seq
| library_strategy |
| Transcriptome and viral metagenome data from Diadema antillarum collected at St. Thomas (USVI) and Saba (Caribbean Netherlands) in Apr 2022 | NCBI Identifier Description
| title |
| Impacts of Terrestrial Organic Matter on Methanogenic Archaea in Littoral and Pelagic Sediments of the Mississippi River Headwaters from June to September 2020 (Cyanos Great Lakes Project) | Layout of library (single or paired end reads).
| library_layout |
| Impacts of Terrestrial Organic Matter on Methanogenic Archaea in Littoral and Pelagic Sediments of the Mississippi River Headwaters from June to September 2020 (Cyanos Great Lakes Project) | Library selection method (PCR based or not).
| library_selection |
| Impacts of Terrestrial Organic Matter on Methanogenic Archaea in Littoral and Pelagic Sediments of the Mississippi River Headwaters from June to September 2020 (Cyanos Great Lakes Project) | Source for library material (genomic DNA, PCR product, etc).
| library_source |
| Impacts of Terrestrial Organic Matter on Methanogenic Archaea in Littoral and Pelagic Sediments of the Mississippi River Headwaters from June to September 2020 (Cyanos Great Lakes Project) | Describes the sequencing protocol; amplicon (primer targeted) or genomic/metagenomic.
| library_strategy |
| Impacts of Terrestrial Organic Matter on Methanogenic Archaea in Littoral and Pelagic Sediments of the Mississippi River Headwaters from June to September 2020 (Cyanos Great Lakes Project) | Sequencing platform used.
| platform |
| Viral metagenomic investigation of the Caribbean echinoderm Holothuria floridana collected in Marathon, Florida on 25 Aug 2023 | Brief description of how libraries were prepared from source material
| design_description |
| Viral metagenomic investigation of the Caribbean echinoderm Holothuria floridana collected in Marathon, Florida on 25 Aug 2023 | Description of sequencing reads: paired
| library_layout |
| Viral metagenomic investigation of the Caribbean echinoderm Holothuria floridana collected in Marathon, Florida on 25 Aug 2023 | Size selection of DNA used
| library_selection |
| Viral metagenomic investigation of the Caribbean echinoderm Holothuria floridana collected in Marathon, Florida on 25 Aug 2023 | Source of sequencing library: Metagenomic DNA
| library_source |
| Viral metagenomic investigation of the Caribbean echinoderm Holothuria floridana collected in Marathon, Florida on 25 Aug 2023 | Sequencing strategy: RNA-Seq
| library_strategy |
| Viral metagenomic investigation of the Caribbean echinoderm Holothuria floridana collected in Marathon, Florida on 25 Aug 2023 | Title of library
| title |
| Flow cytometry, 16S rRNA gene amplicons, chlorophyll a, and surface seawater measurements taken between August 2017 to June 2019 Kāneʻohe Bay, Oʻahu, Hawaiʻi | Description of ampicon library.
| design_description |
| Flow cytometry, 16S rRNA gene amplicons, chlorophyll a, and surface seawater measurements taken between August 2017 to June 2019 Kāneʻohe Bay, Oʻahu, Hawaiʻi | Single or paired end sequencing reads.
| library_layout |
| Flow cytometry, 16S rRNA gene amplicons, chlorophyll a, and surface seawater measurements taken between August 2017 to June 2019 Kāneʻohe Bay, Oʻahu, Hawaiʻi | Mode of library creation.
| library_selection |
| Flow cytometry, 16S rRNA gene amplicons, chlorophyll a, and surface seawater measurements taken between August 2017 to June 2019 Kāneʻohe Bay, Oʻahu, Hawaiʻi | Source of sequencing library.
| library_source |
| Flow cytometry, 16S rRNA gene amplicons, chlorophyll a, and surface seawater measurements taken between August 2017 to June 2019 Kāneʻohe Bay, Oʻahu, Hawaiʻi | Sequencing library type.
| library_strategy |
| Biological oceanographic measurements, 16S rRNA gene amplicons and metagenomes from surface seawater taken from August 2017 to June 2021 at sites within and adjacent to Kāneʻohe Bay, Oʻahu, Hawaiʻi | Description of ampicon library.
| Amplicon_design_description |
| Biological oceanographic measurements, 16S rRNA gene amplicons and metagenomes from surface seawater taken from August 2017 to June 2021 at sites within and adjacent to Kāneʻohe Bay, Oʻahu, Hawaiʻi | Single or paired end sequencing reads for amplicon data.
| Amplicon_library_layout |
| Biological oceanographic measurements, 16S rRNA gene amplicons and metagenomes from surface seawater taken from August 2017 to June 2021 at sites within and adjacent to Kāneʻohe Bay, Oʻahu, Hawaiʻi | Source of sequencing library for amplicon data.
| Amplicon_library_source |
| Biological oceanographic measurements, 16S rRNA gene amplicons and metagenomes from surface seawater taken from August 2017 to June 2021 at sites within and adjacent to Kāneʻohe Bay, Oʻahu, Hawaiʻi | Sequencing library type for amplicon data.
| Amplicon_library_strategy |
| Biological oceanographic measurements, 16S rRNA gene amplicons and metagenomes from surface seawater taken from August 2017 to June 2021 at sites within and adjacent to Kāneʻohe Bay, Oʻahu, Hawaiʻi | Description of metagenome library.
| Metagenome_design_description |
| Biological oceanographic measurements, 16S rRNA gene amplicons and metagenomes from surface seawater taken from August 2017 to June 2021 at sites within and adjacent to Kāneʻohe Bay, Oʻahu, Hawaiʻi | Single or paired end sequencing reads for metagenomes.
| Metagenome_library_layout |
| Biological oceanographic measurements, 16S rRNA gene amplicons and metagenomes from surface seawater taken from August 2017 to June 2021 at sites within and adjacent to Kāneʻohe Bay, Oʻahu, Hawaiʻi | Selection used for sequencing library for metagenomes.
| Metagenome_library_selection |
| Biological oceanographic measurements, 16S rRNA gene amplicons and metagenomes from surface seawater taken from August 2017 to June 2021 at sites within and adjacent to Kāneʻohe Bay, Oʻahu, Hawaiʻi | Sequencing library type for metagenomes.
| Metagenome_library_strategy |
| Full genome and transcriptome sequence assembly of the non-model organism Kellet’s whelk, Kelletia kelletii | Type of sequencing assay performed: WGS or RNA-Seq
| Assay_Type |
| Full genome and transcriptome sequence assembly of the non-model organism Kellet’s whelk, Kelletia kelletii | The average length of the spots (reads) in the run
| AvgSpotLen |
| Full genome and transcriptome sequence assembly of the non-model organism Kellet’s whelk, Kelletia kelletii | The total number of bases sequenced
| Bases |
| Full genome and transcriptome sequence assembly of the non-model organism Kellet’s whelk, Kelletia kelletii | NCBI BioSample package representing type of biosample and required attributes
| BioSampleModel |
| Full genome and transcriptome sequence assembly of the non-model organism Kellet’s whelk, Kelletia kelletii | The name of the sequencing center
| Center_Name |
| Full genome and transcriptome sequence assembly of the non-model organism Kellet’s whelk, Kelletia kelletii | The file type stored in the NCBI DataStore (e.g., FASTQ, BAM)
| DATASTORE_filetype |
| Full genome and transcriptome sequence assembly of the non-model organism Kellet’s whelk, Kelletia kelletii | The provider of the DataStore where files are kept
| DATASTORE_provider |
| Full genome and transcriptome sequence assembly of the non-model organism Kellet’s whelk, Kelletia kelletii | The geographical region of the DataStore
| DATASTORE_region |
| Full genome and transcriptome sequence assembly of the non-model organism Kellet’s whelk, Kelletia kelletii | Single or paired end sequencing reads
| LibraryLayout |
| Full genome and transcriptome sequence assembly of the non-model organism Kellet’s whelk, Kelletia kelletii | Selection used for sequencing library
| LibrarySelection |
| Full genome and transcriptome sequence assembly of the non-model organism Kellet’s whelk, Kelletia kelletii | Source material of sequencing library
| LibrarySource |
| Lost City hydrothermal fluids sequence data from R/V Atlantis AT42-01 in the Lost City hydrothermal field from September to October 2018 (Lost City Limits to Life project) | Read configuration of the sequencing library (paired for paired-end sequencing).
| library_layout |
| Lost City hydrothermal fluids sequence data from R/V Atlantis AT42-01 in the Lost City hydrothermal field from September to October 2018 (Lost City Limits to Life project) | Method used to enrich or select DNA fragments for sequencing (PCR indicates source material was selected by designed primers; RANDOM indicates random selection by shearing or other method)
| library_selection |
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