Dataset: Water column amoA and Nitrospina-like 16S rRNA gene abundances from qPCR in the Eastern Tropical South Pacific using seawater collected on R/V Atlantis (AT15-61) cruise in Jan-Feb 2010 and R/V Melville (MV1104) cruise in Mar-Apr 2011.

ValidatedFinal no updates expectedDOI: 10.26008/1912/bco-dmo.826781.1Version 1 (2020-10-14)Dataset Type:experimentalDataset Type:Cruise Results

Principal Investigator: Karen L. Casciotti (Stanford University)

Contact: Alyson E. Santoro (University of California-Santa Barbara)

BCO-DMO Data Manager: Dana Stuart Gerlach (Woods Hole Oceanographic Institution)

Project: Expression of Microbial Nitrification in the Stable Isotopic Systematics of Oceanic Nitrite and Nitrate (Microbial Nitrification)

Abstract

Water column amoA and Nitrospina-like 16S rRNA gene abundances from qPCR in the Eastern Tropical South Pacific using seawater collected on R/V Atlantis (AT15-61) cruise in Jan-Feb 2010 and R/V Melville (MV1104) cruise in Mar-Apr 2011.

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Results
Santoro, A. E., Buchwald, C., Knapp, A. N., Berelson, W. M., Capone, D. G., & Casciotti, K. L. (2020). Nitrification and nitrous oxide production in the offshore waters of the Eastern Tropical South Pacific. doi:10.1002/essoar.10503499.1
Methods
Mincer, T. J., Church, M. J., Taylor, L. T., Preston, C., Karl, D. M., & DeLong, E. F. (2007). Quantitative distribution of presumptive archaeal and bacterial nitrifiers in Monterey Bay and the North Pacific Subtropical Gyre. Environmental Microbiology, 9(5), 1162–1175. doi:10.1111/j.1462-2920.2007.01239.x
Methods
Mosier, A. C., & Francis, C. A. (2011). Determining the Distribution of Marine and Coastal Ammonia-Oxidizing Archaea and Bacteria Using a Quantitative Approach. Methods in Enzymology, 205–221. doi:10.1016/b978-0-12-381294-0.00009-2
Methods
Santoro, A. E., Casciotti, K. L., & Francis, C. A. (2010). Activity, abundance and diversity of nitrifying archaea and bacteria in the central California Current. Environmental Microbiology, 12(7), 1989–2006. doi:10.1111/j.1462-2920.2010.02205.x

Casciotti, K. L., Santoro, A. E. (2021) Water column amoA and Nitrospina-like 16S rRNA gene abundances from qPCR in the Eastern Tropical South Pacific using seawater collected on R/V Atlantis (AT15-61) cruise in Jan-Feb 2010 and R/V Melville (MV1104) cruise in Mar-Apr 2011.. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2020-10-14 [if applicable, indicate subset used]. doi:10.26008/1912/bco-dmo.826781.1 [access date]

Terms of Use

This dataset is licensed under Creative Commons Attribution 4.0.


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Funded by the U.S. National Science Foundation