jgofs U.S. JGOFS Synthesis & Modeling Project

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DATA: ALL Data - links to available SMP Results
 

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Inventory Data SMP LAS (retired) Guidelines Resources Data Policy Survey Links

SMP Data Collection is complete (October 2005)
SYNTHESIS
Carbon system
Redfield ratios
Air-sea O2 flux
Transmissometer data
Chlorophyll
Colored Dissolved Material
Sediment Traps
Bacteria
Zooplankton
Ocean margins
MODEL
Carbon system
OCMIP
GCM
Ecosystem/biogeochemical models
Particle Flux Models
Sediment models
OTHER
JGOFS data
Nutrients
Seafloor Oxygen flux
Monthly satellite climatology (Halpern et al.)

SYNTHESIS LINKS TO DATA LINKS TO PROJECT INFORMATION
Carbon system
Carbon Survey data
Sabine et al.: ALK,  DIC,  pCO2,  pH,  air-sea pCO2
GLODAPlink to GLODAP Sabine et al. SMP ProjectSMP Project - Global CO2 Survey
Key et al. SMP ProjectSMP Project - Redfield Ratios
Carbon system data inventory
Margarita Conkright: TALK,  pCO2,  pH,  TCO2
at.pdfMap of TALK stations
at.pdfMap of TCO2 stations
pco2.pdfMap of pCO2 stations
ph.pdfMap of pH stations
atct.pdfMap of TALK+TCO2 stations
atph.pdfMap of TALK+pH stations
ATCTph.pdfMap of TALK+TCO2+pH stations
ctph.pdfMap of TCO2+pH stations
Tar file of carbon system inventoriesdownload tar file of carbon system inventories (files are in .csv format)
CO2 Data Inventory InformationData Information
Conkright SMP ProjectSMP Project
234Th based POC export
Ken Buesseler
POC export - ExcelData tables (Excel)
POC export - ASCIIData tables (ASCII)
Data InformationData Information
Buesseler SMP ProjectSMP Project
del-13C Data
Charles D. Keeling
CDIACCDIAC dataset (see "Shore Based Carbon Analyses" item #14) C.D. Keeling SMP ProjectSMP Project
Redfield ratios
Redfield ratios
Yuan-Hui Li and Tsung-Hung Peng
Redfield ratiosTable of Redfield Ratios Data InformationData Information
Peng et al. SMP Project InfoSMP Project
Air-sea O2 flux
Air-sea O2 flux - monthly anomalies
Hernan Garcia and Ralph Keeling
NetCDFNetCDF R Keeling SMP ProjectSMP Project
Transmissometer data
Global transmissometer database
Mishonov, Gardner, Richardson
Transmissometer DataTransmissometer Data
Download Global_xMiss_ODV.zipDownload Global_xMiss_ODV.zip
Data InfoData Information
Gardner et al. SMP ProjectSMP Project
Gardner et al. SMP ProjectGlobal POC concentrations from in-situ and satellite data
TAMU Particle Dynamics Group Web PageTAMU Particle Dynamics Group Web Page
Transmissometer data validation for the HOT and BATS sites
Gardner and Mishonov
TAMU Particle Dynamics Group Web PageTAMU Particle Dynamics SMP Tar file (68M)
HOT and BATS Data validationTransmissometer Data (see HOT and BATS in JGOFS section)
Download HOT_xMissCTD_ODV.zipDownload HOT_xMissCTD_ODV.zip
Download BATS_xMissCTD_ODV.zipDownload BATS_xMissCTD_ODV.zip
Data InfoData Information
Gardner and Mishonov SMP ProjectSMP Project
TAMU Particle Dynamics Group Web PageTAMU Particle Dynamics Group Web Page
Chlorophyll
Global SeaWiFS chlorophyll
September 1997 - December 2004
Smoothed 8-day composites
Jim Yoder and Maureen Kennelly
NetCDFNetCDF
URI AnimationsURI Animations
Data InformationData Information
Yoder SMP Project InfoSMP Project
URI: Ocean Color Remote Sensing InfoURI's Ocean Color Remote Sensing Info.
Colored Dissolved Material
Global monthly colored dissolved and detrital material
Sep 97 - Aug 00
Dave Siegel et al.
NetCDFNetCDF Data InfoData Information
Siegel SMP ProjectSMP Project
Bacteria
Bacterial Biomass and Production
Hugh Ducklow et.al.
Bacteria SynthesisUS JGOFS online database
Data InformationData Information
Ducklow SMP Project InfoSMP Project
Sediment Traps
Global Sediment Trap Synthesis
Honjo et.al.
Bacteria SynthesisTable with database links
JGOFS databaseannual flux data via JGOFS
JGOFS databasetime-series flux data via JGOFS
Data InformationData Information
Honjo SMP Project InfoSMP Project
Zooplankton
Mesozooplankton Production Estimates
Mike Roman
Zooplankton ProductionTables of Oceanic Mesozooplankton Production Estimates Data InformationData Information
Roman and Dam SMP Project InfoSMP Project
Ocean margins
CARIACO Time-series Data
Muller-Karger
CARIACO Time-series DataAccess CARIACO Time-series Data (online in OCB Data Collection)
CARIACO Time-series Datadownload CARIACO Time-series Data (single ASCII file 69 months, from Nov/95 - Aug/01, in common format)
CARIACO Time-series Datadownload CARIACO Time-series Data (zip file of 54 monthly .xls files)
CARIACO Time-series Datadownload CARIACO Time-series Data (tar file of 54 monthly .xls files)
Data InformationData Information
Muller-Karger SMP ProjectSMP Project
Muller-Karger Project UpdateProject Update
USF CARIACO SITEUSF's CARIACO Project Site
Ocean Margins Program data
Verity, Repeta, Bauer, Pietrafesa et al.
Brookhaven access to OMP dataData Access through US JGOFS DBMS
Brookhaven access to OMP dataData Access through Brookhaven
Verity et al. SMP ProjectSMP Project
OMP Home PageOMP home page

MODEL RESULTS LINKS TO RESULTS LINKS TO PROJECT INFORMATION
Carbon system
Carbon transport at 24.5°N in the Atlantic
Wanninkhof and Macdonald
Matlab binary dataData in Matlab binary format
(download tar file containing data and README file)
Wanninkhof Data InformationData Information
Wanninkhof SMP ProjectSMP Project
Diagnostic box model results at Stations BATS and ALOHA
Gruber
Code and results (tarfile)Code and results (tar file containing code, data and README files)
model outputResults Only
Gruber Data InformationData Information
Gruber SMP ProjectSMP Project
OCMIP
OGCM/OCMIP simulations
Najjar, Doney, Marshall, Sarmiento, Caldeira
MIT OCMIP resultsMIT OCMIP results
MIT Model InfoMIT ocean modeling information

SMP LASNCAR OCMIP results TAR (1.8G)
Info, raw DODS accessNCAR OCMIP documents, description, and raw DODS access to results

PMEL LASPrinceton OCMIP results via PMEL LAS

no linkLLNL (see IPSL DODS below to retreive LLNL data)

Najjar et al. SMP ProjectSMP Project (Najjar)
Marshall et al. SMP ProjectSMP Project (Marshall)
Doney SMP ProjectSMP Project (Doney)
Sarmiento SMP ProjectSMP Project (Sarmiento)
Caldeira SMP ProjectSMP Project (Caldeira)
International OCMIP simulations
Access to the OCMIP-2 model output archive via IPSL DODS server (http://dods.ipsl.jussieu.fr)
IPSL DODS ServerIPSL DODS link OCMIP2IPSL OCMIP2 DODS info
Global Circulation Models (GCM)
Simulations of Oxygen Variability in the North Pacific
Thompson and Deutsch
Model Description + NetCDF filesModel Description + NetCDF files Thompson Data InformationData Information
Thompson SMP ProjectSMP Project
Ecosystem/biogeochemical models
3-D Ecosystem Model of the Ross Sea
Arrigo and Robinson
NetCDFNetCDF Arrigo & Robinson Data InformationData Information
Arrigo SMP ProjectSMP Project
Global mixed layer ecosystem model code and inputs
Moore, Doney, Glover et al. model
Model code & inputsModel code and inputs
(three tar files containing code, inputs, and IDL routines)
Doney SMP ProjectSMP Project
p.gifMoore, J.K., et al.  2002. DSRII
p.gifMoore, J.K., et al.  2002. DSRII.
3-D basin-scale ecosystem model of the North Atlantic
Doney, Moore and Lima
NetCDFNetCDF Doney,Moore,Lima Data InformationData Information
Doney-Moore-Lima SMP ProjectSMP Project
Global 3-D ecosystem dynamics and iron cycling model results
Moore and Doney
Model Description + NetCDF filesModel Description + NetCDF files Doney,Moore Data InformationData Information
Doney-Moore SMP ProjectSMP Project
Model results of Si- and Fe-regulated production in Equatorial Pacific
Barber, Chai, Dugdale, Wilkerson & Peng 
Info/results from modelInformation/Results from the 1-D upper ocean eocosystem model
Info/results from modelTAR of model results (1.2M)
Univ. Maine Ocean Modeling Group LASUniv. Maine Ocean Modeling Group Live Access Server
Barber et al. SMP ProjectSMP Project
Results: 1-D upper ocean ecosystem modelInformation/Results from the 1-D upper ocean eocosystem model
Model results for the Tropical Pacific
McClain et al: Model results - 13-year means at 1 deg resolution; physical and biological variables
NetCDFNetCDF Data InfoData Information
McClain et al. SMP ProjectSMP Project
Model results for the BATS region
McGillicuddy: Topex/Poseidon 3-D Model
Software, results, manuscriptSoftware, animated results & manuscript
NetCDFNetCDF
McGillicuddy SMP ProjectSMP Project
Data InfoData Information
f-ratio MATLAB routine
Laws
Laws' Matlab routineMATLAB routine (OLDER VERSION) Laws SMP ProjectSMP Project
f-ratio MATLAB routine (REVISED)
Laws
Laws' MATLAB routineMATLAB routine (REVISED)
Laws SMP ProjectSMP Project
Model Results for the Arabian Sea
Hood et al.
NetCDFNetCDF Data InfoData Information
Hood SMP ProjectSMP Project
Basin Scale Biogeochemical Budgets of the North Atlantic
McGillicuddy and Anderson
Animated resultsAnimated results
NetCDFNetCDF
Ecosystem model codeEcosystem Model Code
McGillicuddy SMP ProjectSMP Project
Data InfoData Information
Model results for the Ross Sea and West Antarctic Peninsula regions
Hofmann et al.
NetCDF (selected results)NetCDF (selected results)
NetCDF (nutrients)NetCDF (nutrients)
Hofmann SMP ProjectSMP Project
Data InfoData Information
Data Info (nutrients)Data Information (nutrients)
Si cycling and Si control of new production and organic carbon export in the Southern Ocean and the Sargasso Sea
Nelson et al.
NetCDF (Sargasso Sea - BATS)NetCDF (Sargasso Sea)
So. Ocean NetCDF files:
  NetCDF (SO-KERFIX-MEAN1-I-05G)Fe 0.5Grazing
  NetCDF (SO-KERFIX-MEAN2-I-1G)Fe 1.0Grazing
  NetCDF (SO-KERFIX-MEAN3-I-2G)Fe 2.0Grazing
  NetCDF (SO-KERFIX-MEAN4-NoI-05G)No Fe 0.5Grazing
  NetCDF (SO-KERFIX-MEAN5-NoI-1G)No Fe 1.0Grazing
  NetCDF (SO-KERFIX-MEAN6-NoI-2G)No Fe 2.0Grazing
Hofmann SMP ProjectSMP Project
Data Info (Sargasso Sea - BATS)Data Information (Sargasso Sea)
Data Info (Southern Ocean - KERFIX)Data Information (So. Ocean)
Particle Flux Models
Coagulation Model
Jackson
Matlab programs to calculate particle size spectrum that results from a dividing algal cell, along with examples of results.
Jackson Matlab programMatlab programs, documentation, and example results Jackson SMP ProjectSMP Project
Vertical Particle Flux Model with Predator-Prey Interactions
Jackson and Burd
Matlab based model of the vertical particle flux, in which stratified predator-prey interactions affect the vertical particle flux.
Jackson Predator-Prey modelMatlab program script. Jackson Data InformationData Information
Jackson SMP ProjectSMP Project
Sediment Models
Parameterizations for Organic Matter Oxidation Kinetics
Martin and Sayles
Parameter TablesData Tables Martin & Sayles Data InformationData Information
Martin SMP ProjectSMP Project

OTHER DATA LINKS TO DATA LINKS TO PROJECT INFORMATION
JGOFS data
JGOFS & US JGOFS data 
Kleypas & Doney: data compilations from Nine JGOFS sites
JGOFS Datatar file of data and supporting files
NCAR sourceNCAR Data Support Section
p.gifKleypas, J.A. and S.C. Doney. 2001. NCAR Technical Note NCAR/TN-447+STR
US JGOFS merged data products
US JGOFS DMO: in situ Process Study data
JGOFS databaseJGOFS database Merged Data Products
           InformationMerged Data Products Information 
Nutrients
Global nutrient fields
Louanchi & Najjar: monthly NO3, PO4, SiO4 on 2° grid
NetCDFNetCDF Data InfoData Information 
Louanchi & Najjar PublicationLouanchi, F. and R. G. Najjar. 2000. Global Biogeochem. Cycles., 14, 957-977. (link to GBC - AGU password required)
Seafloor Oxygen Flux
Seafloor oxygen flux
Jahnke's seafloor oxygen flux data
NetCDFNetCDF Data InfoData Information
Jahnke SMP ProjectSMP Project
Monthly Satellite Climatology
Monthly mean global surface ocean variables - NASA/JPL
Halpern et al. satellite data sets:

NetCDF files:
AVHRR SSTAVHRR/2 Sea Surf Temp (87-88)
AVHRR SSTAVHRR/2 Sea Surf Temp (89-94)
AVHRR SSTAVHRR/2 Sea Surf Temp (95-99)
ERS-1ERS-1 AMI U,V, wind speed (92-94) 
ERS-1ERS-1 AMI wind direction (92-94) 
ERS-1ERS-1 AMI wind speed (95-96) 
ERS-1ERS-1 AMI wind direction (95-96)
ERS-2ERS-2 AMI wind speed (96-99)
ERS-2ERS-2 AMI wind direction (96-99)
GEOSAT SSHGEOSAT sea surf. ht (87-88)
NSCAT wind dir.NSCAT wind direction (97)
NSCAT wind speedNSCAT wind speed (97)
SSM/I wind speedSSM/I wind speed (87-99)
TOPEX/Poseidon SSH '93TOPEX/Poseidon sea surf. ht (93)
TOPEX/Poseidon SSH '94TOPEX/Poseidon sea surf. ht (94)
TOPEX/Poseidon SSH '95-99TOPEX/Poseidon sea surf. ht (95-99)
TOPEX/Poseidon SWHTOPEX/Poseidon sig. wave ht (98-99)
SeaWiFS chl-aSeaWiFS chl-a conc. (98-99)
TMI SSTTMI sea surf. temp. (98-99)

Data InfoData Information
PODAACInformation at PODAAC site