Parameter: bacterial abundance

Short Description:

bacterial abundance

Short Name:

bact_abund

Official Name:

bact_abundance

Graphable:

Yes

No Data Value:

External Identifier:

» skos:broadMatch http://vocab.nerc.ac.uk/collection/P02/current/BNTX

Description

Any enumeration (counts, abundance, concentration) of bacteria (Kingdom Monera so includes cyanobacteria) designated by means other than taxonomic names (e.g. total) in any body of fresh or salt water.

Datasets associated with this parameter

Dataset Name	Brief Description	Project	PI-Supplied Parameter Name
Bacteria	Bacterial abundance, thymidine & leucine incorporation	EDDIES	bacteria
Bacterial cell counts and DOC	bacterial abundance and DOC	DOM_SeasonalDynamics	Cells, Cells_sd
bacteria_ice	Ice core bacteria data	SOGLOBEC, Sea Ice Microbes	bact_abun
bacteria_water	Water column bacteria data	SOGLOBEC, Sea Ice Microbes	bact_abun
beaconII_bgc	Seawater biogeochemistry inshore and offshore the Bermuda coral reef	BEACON II	bacteria
biogeochem and biology	Biogeochemical and biological data from the Sargasso Sea.	Trophic BATS	bact_abund
Biogeochemical survey 2015-2018	Biogeochemical data from cruises AT32, AT34, AT38, AT39-06	DOM_SeasonalDynamics	BactAbund, BactAbund_sd
BIOS-SCOPE survey biogeochemical data		BIOSSCOPE	Bact
Bottle Data	Stations	SoCalPlumeEx2012	HBAC
Data Set 1B: Bioavailability of dissolved organic carbon produced by Thalassiosira weissflogii grown under different pCO2 and temperature conditions - Experiment OA5	Data Set #1B: Bioavailability of dissolved organic carbon produced by Thalassiosira weissflogii grown under different pCO2 and temperature conditions (Experiment OA5)	OA - Effects of High CO2	FCM_T0_0, FCM_T1_45, FCM_T2_70point5, FCM_T3_97point5, FCM_T4_117, FCM_T5_142pont5, FCM_T6_169point5
Data Set 3A: Utilization of dissolved organic carbon by a natural bacterial community as a function of pCO2	Data Set #3A: Utilization of dissolved organic carbon by a natural bacterial community as a function of pCO2	OA - Effects of High CO2	bact_abun_x10e6_avg, bact_abun_x10e6_stderr, bact_abun_x10e6_stdev
EN596 discrete samples	Discrete samples and rate measurements collected aboard the RV Endeavor cruise EN596	EAGER NitFix	HNA, LNA, tot_bact
ESP 2014 Cell Counts	Microbial taxonomy and abundance from ESP, fall 2014	OceanSulfurFluxBact	Hbact_mL
Exp and Survey Biogeochem and Microbial data	Experimental and survey biogeochemical and microbial data from SBDOM cruises in the Santa Barbara Channel.	SBDOM, SBC LTER	tot_bact_cells
Fe-Labeling Expt: E.coli and phage T4 or T5	Fe-Labeling Expt: E.coli and phage T4 or T5	Fe-Virus	bact_cells_ml
Geneflow Samples	Brine samples were collected from both sea ice and cryopeg near Utqiaġvik, Alaska, USA.	Arctic Subzero Brines	Bacterial_abundance
growth phase exopolymers	Exopolymer and carbohydrate production by diatoms with growth.	Diatom EPS Production	bacteria
IO Phytoplankton	Phytoplankton diversity along with carbon and nitrogen uptake rates along the GO-SHIP IO9 repeat hydrography section of the Indian Ocean	IO Phytoplankton	HNA_bacteria, LNA_bacteria
Microbial Biomass and Productivity	Microbial Biomass and Productivity	BWZ	Bact_abund
Mixotrophic nanoflagellate abundances		Giant virus ecology	Bacteria
MO - biogeochemical and microbial field surveys	Biogeochemical and microbial field surveys from the BATS site, 2009-2013	Ocean Microbial Observatory	bact_abund
Niskin bottle samples	PRELIMINARY: Niskin bottle water samples and CTD measurements at water sample depths collected at Bermuda Atlantic Time-Series sites in the Sargasso Sea ongoing from 1988	BATS	Bact
OA Microbe Adaptation	Environmental and physical data associated with ocean acidification microbe adaptation.	OA microbe adaptation, PICO	bacteriaA, bacteriaB
phyto_abundance_Ant2	Plankton abundances from Antarctic phytoplankton experiments	Antarctic microzooplankton , CORSACS	bacteria
Series 3: Skeletonema marinoi growth and aggregation - Aggregation Phase	Series 3: Skeletonema marinoi growth and aggregation - Aggregation Phase	OA - Ocean Acidification and Aggregation	Bacterial_Cells_Aggregates, Bacterial_Cells_Background
Series 3: Skeletonema marinoi growth and aggregation - Cell Growth Phase	Series 3: Skeletonema marinoi growth and aggregation - Cell Growth Phase	OA - Ocean Acidification and Aggregation	Bacteria
SPOT virus environmental	Environmental data for SPOT virus sampling	Marine Viral Dynamics, Bacterial, Archaeal, and Protistan Biodiversity, Mar. Microbial Communities	bact_abun
Switch 2014 Metadata	Cell abundance, nutrient, DMSP concentrations from mesocosm experiment	OceanSulfurFluxBact	Ruegeria_pomeroyi
Thalassiosira wessiflogii growth rate and TEP	Growth rate experiment with the diatom Thalassiosira wessiflogii in semi-continuous culture.	Diatom EPS Production	bacteria
viral and bacterial counts	Viral and bacterial counts from filtered water, stained with SYBR Green and counted using epifluorescent microscopy.	Deep Atlantic DOM	bact_abund
Water Column Chemical and Biological Inventories	Water Column Chemical and Biological Inventories	ArcticNITRO	Bacterial_Abundance

Programs associated with this parameter

U.S. Joint Global Ocean Flux Study

U.S. GLOBal ocean ECosystems dynamics

Database

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Parameter: bacterial abundance