16S and 18S rRNA gene amplicon sequences |
16S and 18S rRNA gene amplicon sequences |
HHQSignals |
organism |
16S rRNA and hydrazine oxidoreductase genes |
Sequence accession numbers of 16S rRNA and hydrazine oxidoreductase genes (hzo) from Cape Fear River Estuary. |
Estuarine ANAMMOX |
taxon |
16S rRNA Sequences |
16S rRNA sequence data from venting fluids and microbial mats at Axial Seamount, 2011. |
AXIAL |
organism |
1_copepod gut fluorescence |
Copepod nauplii and adult gut epifluorescence |
food limitation in copepod nauplii |
copepod_species, algae_species |
2_feeding-copepod chlorophyll uptake |
Chlorophyll uptake by adult and nauplius copepod species on three phytoplankton species |
food limitation in copepod nauplii |
copepod_species, algae_species |
5a_field collection |
Field collection data for taxa detected in nauplii guts |
food limitation in copepod nauplii |
taxon_and_level |
5b_nauplii gut taxa |
Taxa detected in field caught nauplii guts |
food limitation in copepod nauplii |
taxon_1, taxon_2, taxon_level |
5c_BLAST results |
GenBank BLAST results of copepod nauplii gut contents |
food limitation in copepod nauplii |
tax_rank_4, tax_rank_5, tax_rank_6, tax_rank_7, tax_rank_8, tax_rank_9, tax_rank_10, tax_rank_11, tax_rank_12, tax_rank_13, tax_rank_14, tax_rank_15, tax_rank_16, domain, tax_rank_1, tax_rank_2, tax_rank_3 |
5d_molecular id of copepod guts |
Identification of copepod gut contents |
food limitation in copepod nauplii |
taxon_notes_Claident, posterior_prob_100_SAP, posterior_prob_95_100_SAP, copepod_sp, taxon_Perl, taxon_Claident |
ABLE |
Autonomous Behaving Lagrangian Explorer (ABLE) output for 5 taxonomic groups |
ABLE |
taxon |
Abyssal Bulk Isotope Analyses |
Abyssal Bulk Isotope Analyses |
Abyssal food web |
Taxon |
Acropora cervicornis bleaching sequences |
Acropora cervicornis bleaching sequences |
Coral Rickettsiales |
Host_organism |
Algal species Florida Keys |
Algal species ID from herbivore exclusion/nutrient enrichment experiment |
HERBVRE |
taxon |
All taxa colonization counts |
EPR colonizer counts |
Larval supply at EPR vents, EPR Functional Diversity |
dataProviderName, scientificName |
all_species_seen |
All the species seen during broad-scale cruises from the US-GLOBEC Georges Bank Program. |
GB |
taxon |
Amino Acid d15N transfer |
Phytoplankton and grazers grown in lab chemostats |
CSIA-AA Mesozooplankton TP |
organism |
Anaerobic Sediment 18S rRNA amplicons |
Iberian Margin Anaerobic Sediment 18S rRNA amplicons. |
Subseafloor Microbial Ecology |
organism |
ANOVA means |
Mean values for behavioral metrics to be used for statistical comparisons. |
jellyfish predation in turbulence |
species |
Artificial seagrass faunal counts |
Counts of zootaxa collected in artificial seagrass in San Diego Bay |
Eelgrass Hab Fragmentation |
taxon |
Asteroid viral and bacterial metagenome genetic accession information |
|
Sea Star Microbiology |
Host_Species |
AT21-02: sample log - Barbados |
Specimen log from Jason dives, cruise AT21-02, June 2012 |
SEEPC |
taxon_1, taxon_2 |
AT26-15: sample log - GoM-FL |
Specimen log from Alvin dives, cruise AT26-15, May/June 2014 |
SEEPC |
taxon_1, taxon_2 |
AT29-04: sample log - WAM |
Specimen log from HOV Alvin dives, cruise AT29-04, July 2015 |
SEEPC |
taxon_1, taxon_2 |
Atlantic silverside RNA-seq reads |
|
GenomAdapt |
taxonomy_name |
Bacterial cell counts |
Bacterial cell counts during CDOM monoculture experiment |
PlankDOM |
taxon |
bacterioplankton_dmdA_sequences |
Links to published dmdA sequences from marine bacterioplankton from Sapelo Island, GA. |
En-Gen DMSP Cycling |
taxon |
barnacle_mussel_survey |
Intertidal population surveys of mussels and barnacles along European coast (Spain, France) |
EUROWINTER |
taxon |
BATS_cDNA_sequences |
Link to published bacterial cDNA sequences from BATS station. |
En-Gen DMSP Cycling |
taxon |
BATS_Feb_Aug_2012_diversity_rDNA_BLAST |
BLAST results from the Bermuda Atlantic Time Series (BATS) site in Feb. and Aug. 2012 |
DimBio NABE |
taxon_1 |
Bigelow Bight fish and lg inverts |
Benthic habitat correlates of juvenile fish - large inverts & fish |
NEC-CoopRes |
taxon |
Bigelow Bight_sm invertebrates |
Benthic habitat correlates of juvenile fish - invertebrates |
NEC-CoopRes |
taxon |
Bivalves - Table 3 - Bivalve species - Information on sampling stations from the North American Basin |
Bivalves - Table 3 - Bivalve species - Presence 1 and absence 0 of Bivalve species from the North American Basin |
Deep Sea Benthic Dynamics |
TAXA |
Bivalves - Table 4 - Bivalve species - Information on sampling stations from the Western European Basin |
Bivalves - Table 4 - Bivalve species - Information on sampling stations from the Western European Basin |
Deep Sea Benthic Dynamics |
TAXA |
BLOOFINZ-GoM_ABT_prey |
Bluefin tuna gut analysis |
BLOOFINZ-IO, GoMex Tuna Foodweb A, GoMex Tuna Foodweb B |
Taxonomic_level, Taxa, Taxa_group |
BONGO - Zooplankton |
BONGO net tow zooplankton abundance estimates |
GATEKEEPERS |
Taxon |
bongo net zooplankton |
Zooplankton counts for bongo net hauls in the Gulf of Alaska during 2004 |
NEP |
taxon |
BOWLS sample log |
Sample log for specimens collected for genomics analyses |
BOWLS |
taxon |
Brothers Volcano Metagenome-Assembled Genome Accession Numbers |
Brothers Volcano Metagenome-Assembled Genome Accession Numbers |
Brothers Volcano Microbiology |
Organism |
Buoyant single cell densities of marine bacterial isolates |
Data for measurement of single cell buoyant density of bacterial isolates |
Bacterioplankton single-cell growth |
strain |
C and N isotopes |
CN isotopes |
Coral DOM2 |
species |
California Mussel Larvae Experiments |
Carbonate chemistry, shell growth, and respiration data from laboratory experiments on California mussel larvae. |
Mechanisms of bivalve response to acidification |
taxon |
Cannon_2013_T1: Collection and locality information |
Collection and locality information by taxon |
Antarctic Inverts |
taxon |
Cannon_2013_T2: NCBI accessions |
Hemichordata and Echinodermata NCBI accessions |
Antarctic Inverts |
taxon |
Catch revenue by community |
Total catches and estimated revenue by species for communities-at-sea based on landings reported on Vessel Trip Reports |
CC Fishery Adaptations |
sppcode, sppname, species |
Cell abundance and chlorophyll content |
Cell abundance and chlorophyll content |
MixoEvo |
Strain |
Chemical Defenses-1: Flores et al. 2012 |
Chemical Defenses-1: Flores et al. 2012 |
Chemical Defenses |
Alexandrium |
Chemical Defenses-2: Senft-Batoh et al. 2015 (L&O) |
Chemical Defenses-2: Senft-Batoh et al. 2015 (L&O) |
Chemical Defenses |
Copepod, Alexandrium |
Chemical Defenses-3: Senft-Batoh et al. 2015 (Harmful Algae) |
Chemical Defenses-3: Senft-Batoh et al. 2015 (Harmful Algae) |
Chemical Defenses |
Grazer |
ciliate abundance and biomass |
Abundance and biomass of ciliates in the Sargasso Sea from inverted microscope counts. |
Trophic BATS |
taxon |
Circovirus DNA Sequence Information |
DNA sequences of viruses associated with Copepods |
Viruses in Copepods |
taxon |
Clam Outplants |
Clam outplants in Seadrift and Bolinas Lagoon for 2015 |
Invasive_predator_harvest |
species |
cluster analysis - Carbonate Organic Matrix proteins |
Carbonate Organic Matrix (COM) proteins from coral, mollusk, and sea urchin. |
CROA |
taxon |
Coccolithophore survival in darkness |
|
Cocco-Mix |
CCMP_code |
Community composition separated by native and cryptogenic, and introduced species of each community |
|
Competition and Predation across Latitude |
Species |
Composition of experimental marine invertebrate communities across latitude |
Composition of experimental marine invertebrate communities across latitude |
Competition and Predation across Latitude |
Taxa |
Composition of marine invertebrate communities across latitude with exposure to predation |
|
Competition and Predation across Latitude |
Taxa, MorphName |
consumer residence times |
Residence times of consumers in Galápagos subtidal, Isla Baltra |
GMR Trophic Cascades |
predator_grp, species_code |
Copepod RNA-Seq sample information and accessions |
|
Neocalanus Gulf of Alaska |
Species_name |
coral - energy reserves |
Coral energy reserves; calcification, chlorophyll a, stable carbon isotopes, stable nitrogen isotopes |
repeat coral bleaching |
coral_species |
coral percent cover |
Percent cover of coral and other sessile invertebrates at Caribbean reefs |
Climate_Corals_Bleach_Disease |
genera |
Coral pyrosequencing data |
Microbial communities of corals analyzed using 454 Illumina pyrosequencing |
Contagious coral diseases? |
taxon_level, taxon |
Coral reefs in the US Virgin Islands |
|
St John Coral Reefs |
Taxon |
Coral SSU rRNA gene database |
Coral SSU rRNA gene database |
Coral Microbial Relationships |
Taxonomy |
CPR plankton occurrence 2014-2019 |
Continous Plankton Recorder zooplankton and phytoplankton counts Atlantic 2014-2019 |
CPR Plankton Survey |
scientificName |
CPR: Phytoplankton occurrence |
Continous Plankton Recorder zooplankton occurrence data |
CPR Plankton Survey |
scientificName |
CPR: Zooplankton occurrence |
Continous Plankton Recorder zooplankton occurrence data |
CPR Plankton Survey |
scientificName |
Crocosphaera watsonii CO2 and light experiment |
Growth, CO2- and N2-fixation of Crocosphaera watsonii in differing pCO2 and light levels. |
Diaz N2-Fix in High CO2 |
isolate |
Crocosphaera watsonii CO2 experiment |
Growth and N2-fixation of Crocosphaera watsonii under differing pCO2 levels. |
Diaz N2-Fix in High CO2 |
isolate |
Crocosphaera watsonii light experiment |
Growth, CO2- and N2-fixation of Crocosphaera watsonii isolates in differing light intensities. |
Diaz N2-Fix in High CO2 |
isolate |
Cross Bay Demographics |
Demographic data for introduced crab from multiple bays 2009-2016 |
Invasive_predator_harvest |
species |
Cultures isolated from A. bipinnata 2008-2016 |
Symbiodinium cultures isolated from adult colonies of the octocoral Antillogorgia bipinnata in 2008, 2013 and 2016, grown at either 26 or 30 degrees C |
Host Symbiont Temp Response |
Clade |
cyanobacteria N2 fixation |
Cyanobacteria (Trichodesmium and Crocosphaera watsonii) N2-fixation responses to pCO2. |
Diaz N2-Fix in High CO2 |
isolate |
Cyanomyovirus genome sequences |
Genbank accession numbers for genome sequences of cyanomyoviruses collected from the coastal waters of North America |
Cyanophage-Synechococcus interactions, Cyanophage Evolutionary Ecology |
viral_isolate_name |
Cyanophage abundance |
El Nino virus abundance |
El Nino and virus diversity, Cyanophage Evolutionary Ecology |
strain |
dataset1_Krug_et_al_2015: Suppl. Table 3: Accessions |
Table 3: accessions: COI, 16S, 28S. H3 for ~200 spp. |
PLDvFST |
clade |
Deep-sea benthos |
Deep-sea benthos counts from cores (>300 micron), Pacific US continental rise |
Species ranges |
taxon |
Deep-sea larvae for microbiome study |
Deep-sea larvae for microbiome study |
Metacommunity Dynamics, EPR Functional Diversity, Mariana Back-arc Vents |
Lowest_level_taxon_name_or_morphotype, scientificName, Higher_level_taxon_name |
Density of recruits on tiles |
|
St John Coral Reefs |
Family |
Depth ranges for global mesophotic reefs |
Depth ranges of occurrence on reefs |
MCESponge |
Taxon |
Diatom Matrix Mass Spectrometry |
MetaboLights accessions: MS samples |
Metabolic Currencies, Carbon Currencies Microbes |
Organism, Organism_part |
Diatom Matrix NMR |
MetaboLights accessions: NMR samples |
Metabolic Currencies, Carbon Currencies Microbes |
Organism, Organism_part |
Diatom Matrix RNAseq |
NCBI accessions |
Metabolic Currencies |
taxon_microbe |
Diatom NMR |
Molecular P characterization (by NMR) of initial dry POM added to each treatment. |
Taxon-Specific Organic P-C-N Production |
taxon |
Diatom Remineralization Exp |
Time-series of nutrient measurements following addition of diatom derived POM to seawater collected at Station ALOHA. |
Taxon-Specific Organic P-C-N Production |
taxon |
Diatom SEM images - AN10 |
Diatom SEM images |
ANACONDAS |
Taxon |
diatom_abundance_Ant1 |
Diatom abundances from Antarctic phyto and microzooplankton experiments |
Antarctic microzooplankton , CORSACS |
taxon |
DICE_sequences |
Links to published dmdA, cDNA, and RNA sequences from the Dauphin Island Cubitainer Experiment (DICE). |
En-Gen DMSP Cycling |
taxon |
DMSP-dependent_protein_structures |
Links to published DMSP-dependent protein structures at NCBI's MMDB. |
En-Gen DMSP Cycling |
taxon |
DNA primer accession numbers |
Accession numbers of microsatellite DNA primers and links to GenBank. |
Pop connectivity of coral reef fishes |
taxon |
Doliolid diet: zooplankton abundance |
Zooplankton abundances |
Doliolid Diet |
taxon_1, taxon_2 |
Domel_2017_T1: Pallenopsis patagonica specimen and outgroups with accessions |
Pallenopsis patagonica specimen and outgroups with accessions |
Antarctic Inverts |
clade |
DWH_micronekton |
abundances of mesopelagic micronekton from the Deepwater Horizon Oil Spill area, 2010-2011 |
DWH Micronekton |
taxon |
EcoMon Plankton 100m3 |
EcoMon plankton counts from Bongo tows. Includes MARMAP data. |
EcoMon Zooplankton |
taxon |
EcoMon Plankton 10m2 |
EcoMon plankton counts from Bongo tows. Includes MARMAP data. |
EcoMon Zooplankton |
taxon |
Edge effects and fragmentation literature review |
Edge effects and fragmentation literature review |
Habitat Fragmentation |
target_taxon, broad_taxon, lowest_taxon |
Edmunds 2020 L&O: recruitment |
recruitment |
MCR LTER, RUI-LTREB, St. John LTREB |
Taxon |
Edmunds 2020 L&O: taxon composition |
taxonomic composition |
MCR LTER, RUI-LTREB, St. John LTREB |
Taxon |
Edmunds and Lasker MEPS 2019 Fig 1a: Density pooled taxa and one year |
|
Octocoral Community Dynamics |
Taxon |
Edmunds and Lasker MEPS 2019 Fig 1b: Height pooled taxa and one year |
|
Octocoral Community Dynamics |
Taxon |
Edmunds and Lasker MEPS 2019 Fig 2a: Density by taxon and year |
|
Octocoral Community Dynamics |
Life_stage |
Edmunds and Lasker MEPS 2019 Fig 2b: Height by taxon and year |
|
Octocoral Community Dynamics |
Taxon |
Edmunds and Lasker MEPS 2019 Fig 3: Community NMDS |
|
Octocoral Community Dynamics |
Taxon |
Edmunds and Lasker MEPS 2019 Fig S1: Sampling effort |
|
Octocoral Community Dynamics |
Taxon |
Edmunds and Lasker MEPS 2019 Fig S3: Sampling effort, juveniles |
|
Octocoral Community Dynamics |
Taxon |
Edmunds and Lasker MEPS 2019 Fig S4: Colony sizes |
|
Octocoral Community Dynamics |
Taxon |
Edmunds and Lasker MEPS 2019 Fig S5a: Density |
|
Octocoral Community Dynamics |
Taxon |
Edmunds and Lasker MEPS 2019 Fig S5b: Height |
|
Octocoral Community Dynamics |
Taxon |
Edmunds et al. 2019b: Sizes of organisms fixed to flume floor |
|
OA coral adaptation |
Species |
Edmunds et al. 2019b: Sizes of organisms not fixed to flume floor |
|
OA coral adaptation |
Species |
Edmunds et al. 2019b: Sizes of organisms used to calculate growth and for community analysis |
|
OA coral adaptation |
Taxon |
Egg sizes and macromere allocation |
Egg sizes and macromere allocation for diverse annelids and molluscs |
Ciliated Larvae Feeding |
taxon |
Emiliania huxleyi CN content |
Carbon and nitrogen content of E. huxleyi at 3 pCO2 levels, 2011-2012 |
E Hux Response to pCO2 |
Ehuxleyi_strain |
Epibenthic community taxonomy |
Epibenthic community taxonomic hierarchy and sampling method in Aleutian Island kelp forests, 2016-2017 |
Kelp Forest Ecosystem Engineer Loss |
Taxon |
epiflu |
bacterial cell counts, biovolume, carbon biomass - EN321 |
GB |
taxon |
EPR vent colonists functional traits |
|
EPR Functional Diversity |
SCIENTIFIC_OR_COMMON_NAME |
Fire coral - mean density |
Mean density of fire coral |
RUI-LTREB, St. John LTREB, VI Octocorals |
Taxon |
Fish and Invertebrate Transects |
|
Reef Fish Resilience |
Family |
fisheggs |
Fish eggs collected in Bongo nets |
GB |
taxon |
fishlarvaeB |
Georges Bank Fish Larvae Data from Bongo Nets, 1995-1999. |
GB |
taxon |
fishlarvaeM |
Georges Bank Fish larvae collected in MOCNESS tows, 1995-1999. |
GB |
taxon |
FlowCam Particle Sizes |
FlowCam Particle Sizes |
Salp Food Web Ecology |
Class |
Fossil Seal Amino Acid Isotopes |
C and N isotope data for individual amino acids from fossil seals from the western Ross Sea, Antarctica |
Southern Ocean Pinnipeds |
Scientific_name |
Fossil Seal Skeletal Measurements |
Skeletal measurements from fossil seals from the western Ross Sea, Antarctica |
Southern Ocean Pinnipeds |
Taxon_final |
FRT-Dcyl-Symb_2014 |
Dendrogyra cylindrus 23S Illumina 2014 - relative abundance |
EMUCoReS |
species |
FRT-Dcyl-Symb_2015-2016 |
Dendrogyra cylindrus 23S Illumina 2015-16 - relative abundance |
EMUCoReS |
species |
Gene expression profiles from high CO2-adapted Trichodesmium |
gene expression profiles obtained from high through put illumina sequencing of multiple long-term evolved lines of Trichodesmium. |
Trichodesmium in High CO2 |
organism, isolate |
grazing and growth rates |
Protist rates based on epifluorescence counts; cyanobacteria rates based on flow cytometry data (Lomas group); bulk rates based on extracted chlorophyll-a. |
Trophic BATS |
taxon |
Growth and mortality |
Growth and mortality |
St. John LTREB, RUI-LTREB |
coral_taxon |
HADES-K - Specify Export 201305190833 Final |
HADES-K - Specify Export 201305190833 Final |
HADES |
Full_Taxon_Name |
HADES-K Sediment Macrofaunal Diversity |
HADES-K - macrofauna raw counts |
HADES |
TEREBELLIDAE, Unknown_Polychaete, Naididae, Enchytraeidae, BIVALVIA, SIPUNCULA, Unknown_Individuals, ACROCIRRIDAE, AMPHARETIDAE, CIRRATULIDAE, FLABELLIGERIDAE, NEPHTYIDAE, OWENIIDAE, PARAONIDAE, SYLLIDAE |
HADES-K Sediment Meiofaunal Diversity |
HADES-K - meiofauna raw counts |
HADES |
Gastropoda, Sipuncula, Nematoda, Loricifera, Tardigrada, Gastrotricha, Unknown_Individuals, ANNELIDA, ARTHROPODA, Crustacea, Amphipoda, Copepoda, Isopoda, Ostracoda, Kinorhyncha, Bivalvia |
Halanych-Kocot_2014_T1: NCBI accessions |
Antarctic invertebrate collection locations and NCBI SRA accessions |
Antarctic Inverts |
taxon1, taxon2 |
Halanych-Kocot_2014_T3: Best TLR genes from BLASTP search |
Best toll-like receptors (TLR) genes from Lophotrochozoa BLASTP search |
Antarctic Inverts |
taxon1, taxon2 |
Halanych_2013_T1: NCBI accessions |
NCBI accessions |
Antarctic Inverts |
taxon |
Havird_2015_T1: NCBI accessions: COX and PXDN |
NCBI accessions |
Antarctic Inverts |
taxon |
Havird_2015_T2: NCBI accessions: MPO and PXDN |
NCBI accessions: MPO and PXDN outgroups |
Antarctic Inverts |
taxon |
Havird_2015_T3: vertebrate COX conservation |
Conservation of known vertebrate cyclooxygenase functional domains and residues |
Antarctic Inverts |
Brachiopoda, Annelida, Mollusca, Myriapoda, Crustacea, Cephalochordata, Amphimdeon, Insecta |
Hawaiian reef fish genetic accessions 2016 |
Genetic accessions at NCBI Genbank |
Hawaiian Fish Origins |
Species_Names |
Heterosigma akashiwo acclimation |
Heterosigma akashiwo acclimation - BioProject PRJNA377729 |
P-ExpEv |
organism |
Host-symbiont reinfections |
Symbiont removed and anemone reinfected with one of two strains of Symbiodinium |
AnemoneOA |
symbiont_id |
HRR Metabarcoding |
HRR metatranscriptome |
HRR |
Taxonomy |
HRR-IFCB cnn counts |
HRR-IFCB cnn counts |
HRR |
Major_Category, Class |
HRR-IFCB manual carbon |
HRR-IFCB manual biomass |
HRR |
Major_Category, Class |
HRR-IFCB manual counts |
HRR-IFCB manual counts |
HRR |
Major_Category, Class |
Hurricane Harvey Coral Gene Expression |
|
Rapid Reefs Harvey |
Species |
Hydrolytic enzyme activity - other phytoplankton |
Bacterial cell counts during CDOM monoculture experiment |
PlankDOM |
taxon |
HydroSwimParams_IndStats |
Behavioral metrics of swimming by hydromedusae in a turbulence generator. |
jellyfish predation in turbulence |
species |
HydroSwimParams_N |
Swimming trajectories of hydromedusae swimming in turbulence generator (Dimensions: 50 x 23 x 30 cm). |
jellyfish predation in turbulence |
species |
iioe_copepods |
Copepods subsorted from the zooplankton collected during the International Indian OceanExpedition (IIOE) 1960-1965 |
IIOE |
taxon |
iioe_decapods |
Decapods collected during the International Indian OceanExpedition (IIOE) 1960-1965 |
IIOE |
taxon |
iioe_zoo |
Zooplankton collected during the International Indian OceanExpedition (IIOE) 1960-1965 |
IIOE |
taxon |
iioe_zoo_other |
Other Zooplankton groups collected during the International Indian OceanExpedition (IIOE) 1960-1965 |
IIOE |
taxon |
Illumina Sequences |
|
SedimentaryIronCycle |
Species_Names |
inshore trawl fish lengths |
Gulf of Maine Inshore Trawl Survey: Length Frequency Data |
NEC-CoopRes |
taxa |
inshore_fishlist |
Gulf of Maine Inshore Trawl Survey: fish species list |
NEC-CoopRes |
taxa |
inshore_maturity |
Gulf of Maine Inshore Trawl Survey: maturity stage length, weight for selected species |
NEC-CoopRes |
taxa |
IntertidaI Transitions |
IntertidaI Transitions |
Experiments with an Exploited Kelp, Neutral Theory of Biodiversity, Regenerated Nitrogen, LTREB Ecological Dynamics |
taxon_name |
IntertidaI Transitions Mussel Removals |
IntertidaI Transitions Mussel Removals |
Neutral Theory of Biodiversity, Regenerated Nitrogen, LTREB Ecological Dynamics, Experiments with an Exploited Kelp |
taxon_name |
Invertebrate Barcodes from Papua New Guinea |
|
OA_Gradient_Biodiversity |
Organism |
Isolates |
Isolates from Mariana and Kermadec trenches, 2014 |
Mariana Perspectives |
Taxon |
Janosik_2013_T1: Odontasteridae species collection information |
Odontasteridae species collection information |
Antarctic Inverts |
taxon |
Janosik_2013_T2: outgroup species and accessions |
Outgroup species and accessions |
Antarctic Inverts |
taxon |
JeDI |
Jellyfish Database Initiative: Global records on gelatinous zooplankton for the past 200 years |
Trophic BATS |
taxon |
JTMD amphipod counts |
Amphipods collected on Japanese tsunami marine debris |
JTMD-BF |
taxon |
JTMD biodiversity |
Proportion of taxonomic groups from Japanese, oceanic and eastern Pacific waters |
JTMD-BF |
taxon |
JTMD Mytilus population genetics |
Population analysis and metagenomics of Japanese tsunami marine debris mussels |
JTMD-BF |
taxon |
Juvenile oyster expt: non-oyster counts and sizes |
Juvenile oyster expt: non-oyster spp. counts and sizes |
Oyster Reef Reversal |
Classification, Scientific_name |
Juvenile Porites along transects over multiple years |
|
St John Coral Reefs |
Taxon |
krill |
Euphausiid abundance + size distribution (MOCNESS) from LMGould |
SOGLOBEC |
taxon |
Larvae collected near Mariana Back-Arc hydrothermal vents in 2010 |
Larvae collected near Mariana Back-Arc hydrothermal vents in 2010 |
Mariana Back-arc Vents |
scientificName |
larval type codes |
Codes for invertebrate larval types found in water column near methane seep sites |
SEEPC |
larval_type, abbreviation |
LTVR - Fish Survey |
Fish Surveys on the Long Term Vermetid Removal Reefs |
Vermetids_Corals |
Genus_species |
Mariana Back-arc Macrofauna 2014 |
Macrofauna collected on colonization panels at Snail Vent Field on the Mariana Back-arc in 2014 |
Mariana Back-arc Vents |
taxonRank |
Marine Bacterial Isolates |
Bacterial isolates from marine diatom Psuedo-nitzschia |
bacteria, virus, diatom interactions |
taxon |
marine mammal sightings |
Marine mammal (whale and penguin) sightings from Chile to the Western Antarctic Peninsula, 2000-2002 |
SOGLOBEC |
taxon |
Mark Recapture |
Mark recapture data for introduced crab in Seadrift Lagoon 2011-2018 |
Invasive_predator_harvest |
species |
McMurdo epifauna species list |
|
McMurdo Predator Prey, Antarctic Benthic Recovery, McMurdo Marine Benthos, SCINI |
identification, Subspecies |
McMurdo Marine Benthos |
Abundance and distribution of marine infauna in McMurdo Sound, Antarctica |
McMurdo Marine Benthos |
taxon |
Mesocosm microbial analyses results |
|
Seagrass and Oyster Ecosystems |
Kingdom, Phylum, Class, Order, Family, Genus, Species |
Mesophotic benthic organism counts |
|
Hurricane impacts on deep reefs |
Categories |
Meta-analysis of oyster reef nekton |
Database summarizing independent studies of nekton taxa associated with oyster reefs |
Seagrass and Oyster Ecosystems |
taxon |
Metabarcoding zooplankton at station ALOHA: OTU tables and fasta files |
Operational taxonomic unit (OTU) tables and fasta files for representative sequences from each OTU |
Plankton Population Genetics |
silva_tax_level14, silva_tax_level1, silva_tax_level2, silva_tax_level3, silva_tax_level4, silva_tax_level5, silva_tax_level6, silva_tax_level7, silva_tax_level8, silva_tax_level9, silva_tax_level10, silva_tax_level11, silva_tax_level12, silva_tax_level13 |
Metagenome of Bleached and Non-bleached corals |
|
Moorea Virus Project |
Species |
Metagenomes - Iberian Margin |
Iberian Margin Anaerobic Sediment Metagenomes. |
Subseafloor Microbial Ecology |
organism |
microzoo_abundance_Ant1 |
Microzooplankton abundance from temp and iron experiments on Antarctic phyto and microzooplankton |
CORSACS, Antarctic microzooplankton |
taxon |
microzoo_abund_NAtl |
Abundance results from temperature and pCO2 experiments on North Atlantic microzooplankton. |
Antarctic microzooplankton , NASB 2005 |
taxon |
microzoo_epi_abund |
Cell abundance estimates of heterotrophic protists by size-class, based on epifluorescence microscopy. |
CRD FLUZiE |
taxon |
microzoo_epi_biomass |
Carbon biomass estimates of heterotrophic protists by size-class, based on epifluorescence microscopy. |
CRD FLUZiE |
taxon |
MIS_Benthic_Quadrats |
MIS Benthic Quadrat |
SCINI |
taxon |
MIS_Benthic_Transect |
MIS Benthic Transect |
SCINI |
taxon |
MMETSP locations and e-values |
MMETSP location information on samples obtained on LMG1411. |
Polar_Transcriptomes |
TAXON_ID_mean, MMETSP_ID_paste |
MOC1 zoop abund |
MOCNESS-1 Plankton Abundances |
NEP |
species |
MOCNESS - Zooplankton |
MOCNESS tow zooplankton abundance estimates |
GATEKEEPERS |
Taxon |
Modeled thermal traits |
PFT Thermal Response - Modeled thermal traits |
Phytoplankton Community Responses |
clone |
Modern Seal Amino Acid Isotopes |
N isotope data for individual amino acids from modern west Antarctic seals |
Southern Ocean Pinnipeds |
Scientific_name |
Modern Seal Bulk Isotopes |
C and N isotope data for seal tissues from west Antarctica |
Southern Ocean Pinnipeds |
Scientific_name |
Montagna-783256-BenthosSpecies |
macrofauna species abundance |
Hurricane Harvey Texas Lagoons |
SpName |
Monthly Trapping |
Demographic data from introduced crab in Seadrift Lagoon 2009-2019 |
Invasive_predator_harvest |
species |
MWS accession numbers |
GenBank accession numbers for pathogens identified as causing MWS from Kaneohe bay, Oahu, Hawaii |
coral-pathogen interaction |
organism |
N2fix_CO2 Water Samples |
Water samples from DIAZOTROPHS_CO2 cruises KM1016 and KM1110 |
DIAZOTROPHS-CO2 |
taxon |
Naupliar ingestion: JEMBE 2017 |
Naupliar ingestion and clearance rates: JEMBE 2017 |
EAGER: Copepod nauplii |
species |
NCBI BioSample accessions for viruses and microbes |
NCBI issued accession numbers for BioSamples of microbes and viruses. |
Marine Bacterial Viruses |
tax_ID |
neuston |
neuston from salmon trawl cruise |
NEP |
genus_species |
Nitrifier C fixation release |
Nitrifier C fixation release |
O2 Min Metalloenzyme |
Nitrifier_strain |
Nitrifier CN |
Nitrifier CN |
O2 Min Metalloenzyme |
Nitrifier_strain |
non-salmon meristics |
Non-salmon meristics |
NEP |
genus_species |
Northeast US Adult Fish |
Adult fish of the Northeast U.S. Shelf Ecosystem: 1977-1987 and 1999-2008. |
NEFSCBottomTrawl |
taxa |
Northeast US Ichthyoplankton |
Ichthyoplankton of the Northeast U.S. Shelf Ecosystem: 1977-1987 and 1999-2008. |
NEFSC Ichthyoplankton |
taxa |
nutrient utilization traits and citations |
Phytoplankton nutrient traits and data sources |
Phytoplankton Traits |
taxon |
OA Lit Review |
Literature review of Ocean Acidification (OA) effects on phytoplankton. |
P-ExpEv |
organism |
octocoral - sp. abundance and distribution |
Octocorals, scleractinia, macroalgae survey - species abundance and distribution, St. John and St. Thomas, USVI, 2011 |
St. John LTREB, VI Octocorals |
taxon |
octocoral density dependence |
Density of adult and juvenile (and recruiting) octocorals on shallow reefs at multiple locations in St. John, US Virgin Islands |
VI Octocorals, St. John LTREB |
taxon |
Octocoral Recruitment |
Octocoral Recruitment 2014-2019 |
Octocoral Community Dynamics, VI Octocorals |
Taxon |
octocoral survey - densities |
soft coral densities (colonies m-2) counted from photoquadrats archived from LTREB efforts at the "pooled random sites" |
St. John LTREB, VI Octocorals |
group |
octocoral survey - photoquadrats vs. in situ |
soft coral counts from photoquadrats archived from LTREB efforts at the "pooled random sites" and from in situ observations |
St. John LTREB, VI Octocorals |
taxon |
OTU and Sequences |
OTU and sequences |
St. John LTREB, RUI-LTREB |
Symbiodinium_clade |
OTU table for 18S rRNA gene tag sequences from DNA and RNA |
|
SPOT |
taxonomy |
P. xiphias SRA |
P. xiphias SRA, accessions, collection info |
Plankton Population Genetics |
mtCOI_Clade |
Palatability of algal species |
Palatability of non-native alga |
Genetic Adaptation Marine Inv |
Division |
Palau lakes: voucher summary |
Palau lakes: voucher summary |
PaPaPro |
ID_name |
PaPaPro benthic biodiversity |
Point intercept transect surveys of benthic macro-invertebrates and macrophytes in marine lakes, Palau |
PaPaPro |
Main_org_DNA, Other_orgs_DNA_ring |
Particle Genomes |
16S rRNA and genomes of particle associated taxa |
MINTPOM |
taxon_name |
Peru Margin SAGs |
Sub-seafloor single amplified genomes (SAGs) from anaerobic Peru Margin sediment. |
Chloroflexi in deep sea sediments |
organism |
Phosphorus uptake model |
Bulk phosphorus uptake by microbes |
Biological C:N:P ratios |
taxon |
Photosynthesis-Irradiance Curves |
Photosynthesis-Irradiance Curves |
MixoEvo |
Strain |
phyto growth rates |
Marine phytoplankton growth rates, temperatures and isolation locations |
Phytoplankton Traits |
taxon |
phyto temperature traits |
Phytoplankton temperature traits and data sources |
Phytoplankton Traits |
taxon |
Phytoflux_BATS |
BATS phytoplankton and cyanobacteria DGGE DNA data |
Plankton particle flux |
taxon_1, taxon_2 |
Phytoflux_BATS - Clone Library 2008-1010 |
Phytoplankton clone library matches from BATS cruises 2008-2010 |
Plankton particle flux |
clone_id, super_grp_1, phylogenetic_grp, closest_match_id, closest_cultured_match |
phytoplankton chl-a |
CTD data, bottle nutrients, and the contribution to total Chlorophyl-a by phytoplankton taxa |
BenDiM |
taxon |
Phytoplankton phosphonate utilization |
|
Euk Phn Utilization |
Strain_No, Taxonomic_ID |
phytopl_epi_abund |
Cell abundance estimates of eukaryotic phytoplankton by taxa and size-class, based on epifluorescence microscopy. |
CRD FLUZiE |
taxon |
phytopl_epi_biomass |
Carbon biomass estimates of eukaryotic phytoplankton by taxa and size-class, based on epifluorescence microscopy. |
CRD FLUZiE |
taxon |
Planktic foraminifer shell d15N from core-top sediments |
Planktic foraminifer shell d15N from core-top sediments |
N Isotopes Foraminifera |
species |
Planktic foraminifer shell d15N from net tows |
Planktic foraminifer shell d15N from net tows in the Sargasso Sea |
N Isotopes Foraminifera |
species |
Planktic foraminifer shell d15N from sediment traps |
Planktic foraminifer shell d15N from sediment traps in the Sargasso Sea |
N Isotopes Foraminifera |
species |
Planktic foraminifer tissue d15N from net tows |
Planktic foraminifer tissue d15N from net tows in the Sargasso Sea |
N Isotopes Foraminifera |
species |
Pocillopora sequences from 2019 |
|
Pocilloporid Coral Diversity |
Organism |
Polychaete DNA sequences |
DNA sequence data deposited on GenBank for polychaetes used in the project studying the evolution and mechanics of burrowing. |
Burrowing polychaete mechanics |
taxon |
Predation intensity on marine invertebrate communities across latitude observed using underwater video |
|
Competition and Predation across Latitude |
Prey_taxon_3, Predator_scientific_name, Prey_taxon_1, Prey_taxon_2 |
Primary producer amino acid nitrogen isotope data meta-analysis |
Published primary producer amino acid nitrogen isotope values to examine beta variability in trophic position estimates |
GoME Copepod Coral Export |
Scientific_Name, Phylum_Division, Group |
Prochlorococcus and Synechococcus nitrite accumulation in batch culture |
Prochlorococcus and Synechococcus nitrite accumulation in batch culture |
Prochlorococcus N assimilation |
Strain1, Strain2 |
Prochlorococcus Remineralization Exp |
Time-series of nutrient measurements following addition of Prochlorococcus derived POM to seawater collected at Station ALOHA. |
Taxon-Specific Organic P-C-N Production |
taxon |
Projected species probability of occupancy and abundance under ocean warming |
|
CC Fishery Adaptations |
spp |
ProteOMZ Exclusive Peptide Level Spectral Counts |
|
ProteOMZ (Proteomics in an Oxygen Minimum Zone), MM Saito |
Group, LCA_Group, Combo_Group |
ProteOMZ Protein Level Spectral Counts |
Total spectral count of proteins from R/V Falkor cruise 160115 for the ProteOMZ expedition in the Central Pacific in 2016. |
ProteOMZ (Proteomics in an Oxygen Minimum Zone) |
best_hit_taxon_id |
protist abundance and biomass |
Abundance and biomass of protists (based on epifluorescence counts) and bulk biomass (based on extracted chl-a). |
Trophic BATS |
taxon |
Pro_ancestor |
Clones of Prochlorococcus MIT9312 and link to BioProject |
P-ExpEv |
organism, strain |
PRS bacteria identification |
Culture-independent identification of bacteria present in the pressure-retaining seawater (PRS) sampler deployed during Leggo drop 1 |
Mariana Perspectives |
SILVA_classification |
PUA experimental design |
PUA experimental design |
DiatomAldehydes |
Copepod_spp |
PUA Microzooplankton Biomass |
PUA Microzooplankton Biomass |
DiatomAldehydes |
Taxa |
Pump mesozooplankton samples |
Analysis of mesozooplankton from pump samples |
GoMX - NGOMEX |
ID |
Quadrat counts |
|
PoGOMO |
Species |
Raw LC-MS/MS |
Raw LC-MS/MS data with list of identified peptides in xml format. |
Proteomic profiling of Mariprofundus ferrooxydans |
taxon |
Raw LC-MS/MS and DNA |
Raw LC-MS/MS data, with list of identified peptides, and DNA sequences. |
Proteomic profiling of Mariprofundus ferrooxydans |
taxon |
REACH_zooplankton |
Zooplankton abundance from the western Gulf of Maine at four repeated stations from 2002-2004 |
REACH |
taxon |
reconstructed genomes |
Reconstructed genomes from North Pond |
North Pond Microbes |
Taxonomy |
Recruitment composition of sessile marine invertebrate communities across latitude |
|
Competition and Predation across Latitude |
TaxaName |
Reef biogeochemistry, metabolomics, and metagenomics |
Reef biogeochemistry, metabolomics, and metagenomics |
Coral Exometabolomes |
coralspecies |
respiration and photosynthesis I |
Biomass-normalized dark respiration and net photosynthesis rates in coral and algae as a function of pCO2 tested in both 2011 and 2012, Moorea LTER site |
OA coral adaptation |
taxon |
respiration and photosynthesis II |
Biomass-normalized dark respiration and net photosynthesis rates in coral and algae as a function of pCO2 where LEDR (light-enhanced dark respiration) was measured |
OA coral adaptation |
taxon |
Richness of experimental marine invertebrate communities across latitude |
|
Competition and Predation across Latitude |
Morph_taxa |
Richness of marine invertebrate communities across latitude with exposure to predation |
|
Competition and Predation across Latitude |
Taxa, MorphName |
Rock Wall Experiment |
Grazer diversity-substrate hetereogeneity manipulation experiment in Bodega Bay, CA. |
Intertidal Diversity |
taxon |
rocky intertidal biomimic |
Environmental data (water temp, air temp, etc.) from biomimic devices and other loggers located in the rocky intertidal zone. |
Monitoring Rocky Intertidal Ecosystems |
organism |
Ross Sea metaproteome protein spectral counts |
|
CORSACS |
ncbi_id, ncbi_name |
salmon meristics |
Salmonid Meristics and Necropsy Data |
NEP |
genus_species |
salmon_juv_diet |
juvenile salmon diet, 2001-2003 |
NEP |
prey_id_nodc |
Sampling Locations |
Keratoisis Sample Locations |
Bamboo Coral Boron Isotopes |
Taxa |
SCTLD rapid microbiome characterization |
SCTLD microbiome |
Multi-Species Coral Disease |
Coral_species |
Sea fans - nearest neighbor |
Nearest neighbor |
St. John LTREB, VI Octocorals, RUI-LTREB |
NN_genus |
Sea star specimen information: California Academy of Sciences |
Sea star specimen information from the California Academy of Sciences |
Sea Star Microbiology |
Phylum, Family, HigherClassif, Genus, Species |
Sea star specimen information: LA County Museum of Natural History |
Sea star specimen information from the LA County Museum of Natural History |
Sea Star Microbiology |
id |
Seagrass fauna counts |
|
Habitat Fragmentation |
Scientific_name |
Seagrass fauna traits |
|
Habitat Fragmentation |
Taxon_name |
seal_and_prey_fatty_acids |
Fatty acid signature profiles of harbor seals and prey species (raw FID data). |
Seal_response_to_prey |
taxon |
seal_prey_by_region |
Summary of prey groups found in harbor seal scat samples from the San Juan Islands. |
Seal_response_to_prey |
taxon |
SECM_zoop |
Zooplankton counts for the Southeast Alaska Coastal Monitoring |
NEP |
taxon |
seep colonization |
Species counts (per 200cm2) on wood, rock and biotic colonization substrates deployed for 10 months at Mound 12 on the Costa Rica margin (AT 15-59) |
Seep Carbonate Ecology CROCKS II |
taxon |
seep species abundance |
species abundance on carbonate rocks collected from active and inactive sites at methane seeps on the Costa Rica and Oregon margins |
Seep Carbonate Ecology CROCKS II |
taxon |
seep specimens |
Methane seep hard substrate species collected on 4 RV/Atlantis cruises and lodged at the SIO Benthic Invertebrate Collection. |
Seep Carbonate Ecology CROCKS II |
subphylum_class |
seep transplant |
species abundance from transplant expts. between active and inactive areas around methane seeps |
Seep Carbonate Ecology CROCKS II |
taxon |
SEEPC larval collections: MOCNESS |
MOCNESS collections of invertebrate larvae throughout water column near methane seep sites: Barbados Accretionary Prism, 2012; Gulf of Mexico, 2014;Western Atlantic Margin, 2015 (SEEPC Project) |
SEEPC |
larval_type, morphotype |
SEEPC larval collections: SyPRID |
AUV Sentry collections of invertebrate larvae close to the bottom near methane seep sites at the Western Atlantic Margin, 2015 (SEEPC Project) |
SEEPC |
larval_type, morphotype |
sequence accession numbers |
GenBank accession numbers for sequences from deep-sea protobranch bivalves. |
Ev Deep Sea Molluscs II |
organism |
sequence_accessions |
Sequence accession numbers from microbialite mats. |
Protists_Stromatolites |
subject |
Si Depletion Experiment: EDS and SEM |
|
Coccolithophore Silicon Requirements |
Species |
Single-cell genomics of Chloroflexi |
Chloroflexi accessions |
Subsurface FeOBs |
taxon_name |
SMURF faunal settlement |
|
Habitat Fragmentation |
Taxa |
Southern California Seeps Stable Isotopes |
|
Methanosphere |
Taxon_ID |
soxB Sequences |
soxB gene sequence data from microbial mats at Axial Seamount, 2011. |
AXIAL |
organism |
Species key |
Species key for individuals surveyed in studies conducted by M. Hixon, C. Benkwitt, and T. Kindinger |
BiodiversityLossEffects_lionfish |
SCIENTIFIC_NAME |
Sponge abundance by species on the coral reefs of St. John USVI 1992-2017 |
|
RUI-LTREB, Octocoral Community Dynamics |
Taxon |
Sponge holobiont accessions and metadata |
Sponge holobiont accessions and metadata |
DimensionsSponge |
host |
Sponge Symbiont Carbon and Nutrient Cycling |
Sponge Symbiont Carbon and Nutrient Cycling |
Sponge_Loop |
host |
Sponge-Associated Microbial Communities (via 16S-V4 rRNA amplicon sequencing) Following Storm-Driven Flooding |
|
Rapid Reefs Harvey |
Species |
SSU rRNA Gene Sequencing from SPOT |
SSU rRNA Gene Sequencing from SPOT |
SPOT |
tax_id |
Sulfitobacter phage accessions |
Sulfitobacter phage accessions |
Roseophage as a Model |
taxon, strain |
Sulfonates in plankton cultures |
|
Sulfonate Cycling |
Organism |
Summary abundance of soft corals, stony corals, and algae on the reefs of St. John USVI 1992-2017 |
|
RUI-LTREB, Octocoral Community Dynamics |
Taxon |
Suppl 2c: microbial sample metadata |
Microbial sample metadata, sequencing and treatment details, temperature and salinity |
HERBVRE |
host_common_name, host_taxon_name, host_taxid |
Suppl 2c: parrotfish bite annotations |
Parrotfish bite annotations |
HERBVRE |
reassigned_host_taxon_name, secnd_likely_host_by_mitochondria, new_host_taxon_name |
Suppl 3a: core microbiome |
Core microbiome |
HERBVRE |
taxonomy |
Suppl 3f: dominant microbe taxa |
Dominant microbe taxa |
HERBVRE |
display_name, taxonomy |
Symbiodinium Fv/Fm over a temperature gradient |
Symbiodinium Fv/Fm over a temperature gradient |
Varadero Reef, GCMB |
Strain |
Synechococcus accessions |
Synechococcus accessions |
Phytoplankton Community Responses |
Organism |
T. pseudonana fatty acids by biovolume |
T. pseudonana fatty acids by biovolume |
Phytoplankton Community Responses |
strain |
T. pseudonana fatty acids per cell |
T. pseudonana fatty acids by cell |
Phytoplankton Community Responses |
strain |
Table 3 - Hatching success |
Table 3 - Hatching success |
OA Calanus Survival |
SPECIES |
Tam genome analysis |
Thermovibrio ammonificans HB1 genome manual curation |
Deep Biosphere Energy Limitation |
Organism, Organism_Name |
TEN Biomass Weights Spring 2018 |
TEN Biomass Weights Spring 2018 |
Tropicalization Seagrass Beds |
otherveg |
TEN Fish Survey Data |
Size and abundance data for fish communities across the Thalassia Experimental Network (TEN) sites |
Tropicalization Seagrass Beds |
fish_spp |
Thaps microarrays - ISB |
Microarrays for T. pseudonana diatoms grown in the laboratory under different conditions. |
OA Diatom Response |
taxon |
Thermophile abundance - MPN |
Abundances of various thermophiles, and total CH4 produced in microcosms |
NeMO2015 |
organism |
Tide Pool Community Surveys: Mobile organisms |
Tide Pool Community Surveys: Mobile organisms |
Sitka CO2 and Temp Expt |
Organism |
Tide Pool Community Surveys: Sessile organisms |
Tide Pool Community Surveys: Sessile organisms |
Sitka CO2 and Temp Expt |
Organism |
Total spectral count of proteins |
Global metaproteomic dataset for KM1128 the METZYME expedition. |
MetZyme |
best_hit_species, best_hit_taxon_id |
Trait Data |
Trait data captured from literature sources, field observations and measurements of sessile marine invertebrates from coastal sites across a geographic gradient spanning the sub-arctic to the tropics |
Competition and Predation across Latitude |
MorphName, MorphTaXa |
Trait data: native, cryptogenic, introduced species |
|
Competition and Predation across Latitude |
MorphName |
trawl catch - GoA |
CGOA trawl data |
NEP |
genus_species |
Trawl survey: fish and jellyfish stomach contents |
Fish and jellyfish stomach contents |
PelagicHypoxia |
Prey |
Trawl survey: species list |
Species list |
PelagicHypoxia |
Family, Genus, Species |
Tricho NMR |
Molecular P characterization (by NMR) of initial dry POM added to each treatment. |
Taxon-Specific Organic P-C-N Production |
taxon |
Tricho Remineralization Exp |
Time-series of nutrient measurements following addition of Trichodesmium derived POM to seawater collected at Station ALOHA. |
Taxon-Specific Organic P-C-N Production |
taxon |
Trichodesmium consortia FASTq accessions |
NCBI accession numbers for raw RNA-seq fastq files derived from laboratory-maintained Trichodesmium erythraeum cultures |
HiCO2_AdaptCyano, TriCoLim |
organism_community |
Trichodesmium field metaproteomes - protein spectral counts |
|
Cyanobacteria Warming Responses, TriCoLim, MM Saito, MM Proteins and Organics Tech |
ncbi_id, ncbi_name |
Trichodesmium field metaproteomes - protein spectral counts in alternative format |
|
Cyanobacteria Warming Responses, TriCoLim, MM Saito, MM Proteins and Organics Tech |
Taxonomy |
Trichodesmium field metaproteomes - single colony metaproteomes |
|
Cyanobacteria Warming Responses, TriCoLim, MM Saito, MM Proteins and Organics Tech |
Taxonomy |
Trichodesmium sequence accessions |
GenBank Trichodesmium accessions and associated metadata |
P Processing by Tricho |
organism, strain, isolate, host |
trichodesmium_fixation |
CO2 and N2 fixation and trichome length of Trichodesmium erythraeum under varying pCO2 and light conditions. |
PhytoTM_in_HighCO2 |
strain |
trichodesmium_growth |
Growth rates of two strains of Trichodesmium erythraeum under varying pCO2 and light conditions. |
PhytoTM_in_HighCO2 |
strain |
tucker catch - CGoA LTOP |
Zooplankton catch data from Tucker trawl from CGOA LTOP cruises, 2001-2003 |
NEP |
taxon |
Vent_CSP_SAG |
Single amplified genomes (SAGs) of microbial cells isolated from Crab Spa, East Pacific Rise |
Microbial Communities at Deep-Sea Vents |
taxon |
Vertebrate home range and body size |
|
CC Fishery Adaptations |
Species |
Vertical Plankton Tow - VPT |
Vertical Plankton Tow (VPT) data from 1997 - 2003 |
NEP |
species |
Vitacopss: cell counts and chla |
Picoplankton growth with nitrate and B vitamins from San Pedro Ocean Timeseries (SPOT), 2015 |
B-vitamin plankton succession |
organism |
Vitacopss: eukaryote abundance by taxon |
Eukaryote plankton abundance and composition with nitrate and B vitamins from San Pedro Ocean Timeseries (SPOT), 2015 |
B-vitamin plankton succession |
taxon |
VPR_ashjian_alt |
Display of Video Plankton Recorder data where taxa are not diplayed in separate columns |
GB |
taxon |
VPR_ashjian_alt_SO |
Display of Video Plankton Recorder data where taxa are not diplayed in separate columns |
SOGLOBEC, Southern Ocean Krill |
taxon |
VPR_ashjian_nonzero |
Video Plankton Recorder data where abundances of zero have been removed from dipslay |
GB |
taxon |
VPR_ashjian_nonzero_SO |
Video Plankton Recorder data where values reported as zero or nd have been removed from display |
SOGLOBEC, Southern Ocean Krill |
taxon |
West Antarctic Isoscape Data |
C and N isotope data for zoo- and phytoplankton from west Antarctica |
Southern Ocean Pinnipeds |
Taxon |
whales aerial sightings |
Right Whales aerial sightings in Cape Cod Bay and adjacent waters, 2002 |
NEC-CoopRes |
taxon |
winter flounder catch |
Experimental winter flounder trap study, coastal Maine, 2005-2006: catch data |
NEC_ProjDev |
taxon |
ZEN 2015 ECO Experiment: Crustacean Survival |
Amphipod and isopod survival in global eelgrass habitats |
ZEN 2 |
Taxon |
zooplankton abund and stages_lmg |
Zooplankton abundance + stages from MOCNESS nets, LMGould |
SOGLOBEC |
taxon_group, taxon |
zooplankton abund and stages_nbp |
Zooplankton abundance + stages from MOCNESS nets, NBPalmer |
SOGLOBEC, Southern Ocean Krill |
taxon |
zooplankton abund biomass_MOC - nbp |
Zooplankton abundance + biomass from silhouettes, MOC nets, NBPalmer |
SOGLOBEC, Southern Ocean Krill |
taxon |
zooplankton abundance |
hydromedusae and zooplankton abundance in Naragansett Bay timeseries |
Hydromedusae trophic ecology |
taxon, taxon2 |
zooplankton counts and abundances |
Zooplankton counts and abundances from net tows in Trondheimsfjord, Norway in spring 2012 |
Calanus_Diapause |
taxon |
Zooplankton d13C and d15N of individual amino acids from RR1813 |
Zooplankton d13C and d15N of individual amino acids from RR1813 |
EXPORTS Isotopes |
Taxa |
Zooplankton metabolic traits |
Respirometry data for pelagic crustaceans, cephalopods, and fish |
Metabolic Index |
Taxa |
zooplankton tow meta |
Zooplankton net haul metadata and specimen removal records |
Calanus_Diapause |
taxa_removed_1, taxa_removed_2, taxa_removed_3 |
zooplankton_taxonomy |
Zooplankton taxonomic data from MOCNESS and IONESS tows |
VERTIGO |
taxon |
zoop_ANT-XXIV_1 |
Zooplankton identified on Polarstern cruise ANT-XXIV_1 in the Eastern Atlantic |
CMarZ_2004-2010 |
taxon |
zoop_RHB0603 |
Zooplankton species identified during RHB0603 in the Sargasso Sea |
CMarZ_2004-2010 |
taxon |
ZooSCAN biomass:biovolume BATS |
|
Zooplankton Gradients, Zooplankton Diel Rhythm, BIOSSCOPE |
taxa |
ZooSCAN MOCNESS BATS: M3 to M13 |
|
Zooplankton Gradients, Zooplankton Diel Rhythm, BIOSSCOPE |
object_annotation_hierarchy |
zoo_cb_meter_bongo |
Zooplankton meter3 counts from GSO/URI - Bongo Nets only |
GB |
taxon |
zoo_cb_meter_moc |
Zooplankton meter3 count data from GSO/URI - MOCNESS 1m2 only |
GB |
taxon |
zoo_cb_meter_pump |
Zooplankton meter3 counts from GSO/URI - Pump data only |
GB |
taxon |
zoo_MOC_GoM |
Zooplankton (including Calanus finmarchicus stages) abundance and biomass from MOCNESS tows, Gulf of Maine |
GB |
taxon3, taxon1, taxon2, kingdom, phylum |
zoo_pump |
Zooplankton counts (density) |
GB |
taxon |
zoo_sq_meter_bongo |
Zooplankton meter2 counts from GSO/URI - Bongo Nets only |
GB |
taxon |
zoo_sq_meter_moc |
Zooplankton meter2 count from GSO/URI - 1m2 MOCNESS nets only |
GB |
taxon |
zoo_sq_meter_pump |
Zooplankton meter2 counts from GSO/URI - Pump data only |
GB |
taxon |