Project: New technology for high resolution analysis of proteins and other organic materials produced by marine microorganisms

Acronym/Short Name:

MM Proteins and Organics Tech

Project URL:

Project Web Site

Start Date:

2013-06

End Date:

2014-06

Programs:

Unaffiliated

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Description

In support of acquiring a high resolution mass spectrometer that incorporates the latest technologies for analyzing proteins and other organic materials.

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Funding

Funding Source	Award Number
Gordon and Betty Moore Foundation: Marine Microbiology Initiative	GBMF3934

Dataset Collections

Dataset Short Name	Full Dataset Title
Diel proteomes Trichodesmium IMS101	Diel proteomes of cultured Trichodesmium erythraeum sp. IMS101 from laboratory experiments conducted in November of 2018
Trichodesmiium field metaproteomes - sample provenance	Trichodesmium sample provenance from samples collected in North Atlantic surface waters, station BATS, and station ALOHA between 2000 and 2018
Trichodesmium field metaproteomes - peptide spectral counts	Net tow metaproteoome of Trichodesmium species mapped to a Trichodesmium metagenome plus cyanoGEBA species genomes in units of normalized peptide spectral counts from samples collected in the Atlantic and Pacific Ocean between 2000 and 2018
Trichodesmium field metaproteomes - protein spectral counts	Net tow metaproteome of Trichodesmium species mapped to a Trichodesmium metagenome plus cyanoGEBA species genomes in units of normalized protein spectral counts from samples collected in the Atlantic and Pacific Ocean between 2000 and 2018
Trichodesmium field metaproteomes - protein spectral counts in alternative format	Metaproteomes of Trichodesmium from samples collected in North Atlantic surface waters, station BATS, and station ALOHA between 2000 and 2018
Trichodesmium field metaproteomes - sequence fasta	FASTA file of sequences in Trichodesmium field metaproteomes mapped to a Trichodesmium metagenome plus cyanoGEBA species genomes from samples collected in the Atlantic and Pacific Ocean between 2000 and 2018
Trichodesmium field metaproteomes - single colony metaproteomes	Single colony metaproteomes of Trichodesmium from samples collected in North Atlantic surface waters during the R/V Atlantis cruise AT39-05 in March of 2018

Deployments

Total: 2

Cruise/Deployment	Platform Type	Start Date	Chief/Co-chief Scientist
AT39-05	vessel	11 Feb 2018	David A. Hutchins
JC150	vessel	26 Jun 2017	Claire Mahaffey

Project Coordinators

Person	Roles	Affiliation
Mak A. Saito	Principal Investigator	Woods Hole Oceanographic Institution (WHOI)

Database

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Project: New technology for high resolution analysis of proteins and other organic materials produced by marine microorganisms