Dataset: ITS2 amplicon sequences from Acropora hyacinthus samples collected at mutliple timepoints in Moorea, French Polynesia after the mass bleaching event of 2019

ValidatedRelease Date:2022-12-31Final no updates expectedDOI: 10.26008/1912/bco-dmo.876564.1Version 1 (2022-06-29)Dataset Type:Other Field Results

Principal Investigator, Contact: Marie Strader (Auburn University)

Co-Principal Investigator: Gretchen E. Hofmann (University of California-Santa Barbara)

BCO-DMO Data Manager: Taylor Heyl (Woods Hole Oceanographic Institution)

BCO-DMO Data Manager: Shannon Rauch (Woods Hole Oceanographic Institution)

Project: RAPID: Collaborative Research: Studies of recovery from bleaching in Acropora hyacinthus: epigenetic shifts, impacts on reproductive biology and carry-over effects (Moorea coral bleaching)

Abstract

This dataset represents ITS2 amplicon sequences from Acropora hyacinthus samples collected at mutliple timepoints in Moorea, French Polynesia after the mass bleaching event of 2019.

Cite Dataset

To assess in hospite symbiont community dynamics in a major reef-building coral, Acropora hyacinthus, during a mass bleaching event we sampled small pieces of tissue from each colony and performed ITS2 amplicon sequencing. Samples were collected at the height of the bleaching event (May 2019), 3 months after (August 2019) and 5 months later (October 2019). Samples were collected at 3 different reef zones, backreef (~1 meter depth), shallow forereef (~5 meter depth), and deeper forereef (~14 meter depth).

Raw sequence data have been deposited in the NCBI Sequence Read Archive (SRA) under BioProject number PRJNA833391. This dataset also includes relevant metadata for each sample.

Related Datasets

IsRelatedTo
Dataset: http://www.ncbi.nlm.nih.gov/bioproject/PRJNA833391
Auburn University. In hospite Symbiodiniaceae ITS2 Targeted loci environmental. 2022/04. In: BioProject [Internet]. Bethesda, MD: National Library of Medicine (US), National Center for Biotechnology Information; 2011-. Available from: http://www.ncbi.nlm.nih.gov/bioproject/PRJNA833391. NCBI:BioProject: PRJNA833391.

Related Publications

Results
Leinbach, S. E., Speare, K. E., & Strader, M. E. (2022). Reef habitats structure symbiotic microalgal assemblages in corals and contribute to differential heat stress responses. Coral Reefs. https://doi.org/10.1007/s00338-022-02316-w

Strader, M., Hofmann, G. E. (2022) ITS2 amplicon sequences from Acropora hyacinthus samples collected at mutliple timepoints in Moorea, French Polynesia after the mass bleaching event of 2019. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2022-06-29 [if applicable, indicate subset used]. doi:10.26008/1912/bco-dmo.876564.1 [access date]

Terms of Use

This dataset is licensed under Creative Commons Attribution 4.0.


If you wish to use this dataset, it is highly recommended that you contact the original principal investigators (PI). Should the relevant PI be unavailable, please contact BCO-DMO (info@bco-dmo.org) for additional guidance. For general guidance please see the BCO-DMO Terms of Use document.

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Funded by the U.S. National Science Foundation