Instrument: qPCR Thermal Cycler

Acronym:

qPCR

External Identifier:

» skos:broadMatchskos:closeMatch http://purl.obolibrary.org/obo/OBI_0400116 , http://purl.obolibrary.org/obo/NCIT_C51962

Description

An instrument for quantitative polymerase chain reaction (qPCR), also known as real-time polymerase chain reaction (Real-Time PCR).

Datasets

Dataset Name	Brief Description
Bugula neritina mesocosm symbiont titers	Symbiont titers in B. neritina colonies grown under different conditions
Chemical Defenses-5: Park and Dam 2021	Chemical Defenses-5: Park and Dam 2021
Coral ESVs: Galaxaura	Microbial ESV counts for corals exposed to Galaxaura
Coral ESVs: Sargassum	Microbial ESV counts for corals exposed to Sargassum
DON_Oxidation	Data collected on cruise SAV 17-16 plus related ancillary samples from the same geographic area
Effects of protists on HBx predation	Population Changes
ETSP qPCR	Water column amoA and Nitrospina-like 16S rRNA gene abundances from qPCR in the Eastern Tropical South Pacific
Heat stress experiment data
Initial conditions and naupliar abundances: MEPS 2017	Initial conditions and naupliar abundances of Parvocalanus crassirostris and Bestilina similis: MEPS 2017
Mesocosm Growth Data Winter 2017	Size of B. neritina colonies with and without symbiont grown at different temperatures
Mesocosm warming experiment quantitative PCR inhibition controls
Mesocosm warming experiment seagrass metrics
Microbial Alpha Diversity	Microbial Alpha Diversity
North Atlantic subseafloor clay metagenomes and metatranscriptomes	16S rRNA gene datasets, metagenomes, and metatranscriptomes
Oyster genetic identity and parasite community structure	Oyster genetic identity and parasite community structure
qPCR	LMG1801 qPCR
qPCR assays	qPCR assays
qPCR_Parameters	Limits of detection and qPCR efficiencies from cruise SAV 17-16 in the South Atlantic Bight aboard the R/V Savannah from 2011 to 2017
Quantitative PCR: Dilution test	Quantitative PCR: Dilution test
Quantitative PCR: Field Validation	Quantitative PCR: Individuals
Quantitative PCR: Individuals	Quantitative PCR: Individuals
Recruit area measurements
Recruit qPCR data
Recruit survivorship and symbiont acquisition
SERC 2019 viral dilution incubations	Gene copy number counts and 16S analyses of July 2019 Rhode River surface water incubated with or without viral dilution
SERC time series	Water quality data, gene copy number counts, and 16S analyses from Rhode River samples collected at SERC
Spatiotemporal characterization of nirK and nirS	Spatiotemporal characterization of nirK and nirS abundance in San Francisco Bay
Symbiont community structure in Orbicella faveolata	Symbiont community structure in Orbicella faveolata

Database

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Instrument: qPCR Thermal Cycler