Bethany D. Jenkins

Affiliation:

Address:

Department of Cell and Molecular Biology and Graduate School of Oceanography
279 CBLS, 120 Flagg Road
Kingston, RI
USA 02881

ORCiD:

0000-0003-2319-3098

Activities reported for Bethany D. Jenkins:

Program coordination

None

Project coordination

Genomic and Transcriptomic Comparison of Iron and Light Physiology in Coastal and Oceanic Diatoms (GeTFeHvCOdia)	Principal Investigator, Contact
Collaborative Research: Defining the biogeochemical drivers of diatom physiological ecology in the North Atlantic (North Atlantic Diatoms)	Co-Principal Investigator
Collaborative Research: Investigating Iron-binding Ligands in Southern Ocean Diatom Communities: The Role of Diatom-Bacteria Associations (Diatom_Bacteria_Ligands)	Contact, Principal Investigator
Collaborative Research: Diatoms, Food Webs and Carbon Export - Leveraging NASA EXPORTS to Test the Role of Diatom Physiology in the Biological Carbon Pump (Diatoms and carbon export)	Principal Investigator, Contact
RII Track-1: Rhode Island Consortium for Coastal Ecology Assessment, Innovation, and Modeling (C-AIM)	Co-Principal Investigator
How Bacteria Influences the Production of Domoic Acid (DA Bacterial Influence)	Co-Principal Investigator

Deployment coordination

Deployment	Synonyms	Platform	Role
Jenkins_2015		URI	Principal Investigator
NBP1608		Nathaniel B. Palmer	Chief Scientist

Datasets

Project: Narragansett Bay Long-Term Plankton Time Series

Dataset	Version Date	Current State
Pseudo-nitzschia spp. presence-absence and environmental data in Narragansett Bay in Rhode Island, USA and the Northeast U.S. Shelf (NES-LTER transect) from 2018-2023 Principal Investigator	2024-10-14	Final no updates expected
Amplicon sequence variants (ASVs) and taxonomy of Pseudo-nitzschia spp. from Narragansett Bay in Rhode Island, USA and the Northeast U.S. Shelf (NES-LTER transect) from 2018-2023 Principal Investigator	2024-10-11	Final no updates expected

Project: MCA: Developing transcriptomics as a tool to investigate toxic diatom responses to ocean heatwave and upwelling events

Dataset	Version Date	Current State
Cluster (combined temperature, nutrient concentration, and CO2) results from laboratory experiments with Pseudo-nitzschia australis conducted from 2021 to 2022 Scientist	2023-08-28	Final no updates expected
CO2 experiment physiology and carbonate chemistry from laboratory experiments with Pseudo-nitzschia australis conducted from 2021 to 2022 Scientist	2023-08-28	Final no updates expected
Single-factor temperature experiment physiology and carbonate chemistry from laboratory experiments with Pseudo-nitzschia australis conducted from 2021 to 2022 Scientist	2023-08-28	Final no updates expected
N:P ratio experiment physiology and carbonate chemistry laboratory experiments with Pseudo-nitzschia australis conducted from 2021 to 2022 Scientist	2023-08-28	Final no updates expected

Project: RII Track-1: Rhode Island Consortium for Coastal Ecology Assessment, Innovation, and Modeling

Dataset	Version Date	Current State
Pseudo-nitzschia spp. presence-absence and environmental data in Narragansett Bay in Rhode Island, USA and the Northeast U.S. Shelf (NES-LTER transect) from 2018-2023 Principal Investigator	2024-10-14	Final no updates expected
Amplicon sequence variants (ASVs) and taxonomy of Pseudo-nitzschia spp. from Narragansett Bay in Rhode Island, USA and the Northeast U.S. Shelf (NES-LTER transect) from 2018-2023 Principal Investigator	2024-10-11	Final no updates expected
Presence or absence of amplicon sequence variants (ASVs) recovered from samples which are described in DATASET 01, Pseudo-nitzschia spp. from weekly samples and offshore cruises with the Northeast U.S. Shelf (NES) Long-Term Ecological Research (LTER) Principal Investigator	2021-04-05	Final no updates expected
Amplicon sequence variants (ASVs) recovered from samples and their related identification as Pseudo-nitzschia taxa and the methods used Principal Investigator	2021-04-05	Final no updates expected
Pseudo-nitzschia spp. cell counts, nutrients water temperature and salinity, and concentrations of the toxin domoic acid from weekly samples and offshore cruises with the Northeast U.S. Shelf (NES) Long-Term Ecological Research (LTER) Principal Investigator	2021-04-05	Final no updates expected

Project: Collaborative Research: Diatoms, Food Webs and Carbon Export - Leveraging NASA EXPORTS to Test the Role of Diatom Physiology in the Biological Carbon Pump

Dataset	Version Date	Current State
Dissolved trace metal (Mn, Fe, Co, Ni, Cu, Zn, Cd, Pb) concentrations from depth profile samples collected on the 2018 EXPORTS cruise (RR1813) to the subarctic North Pacific near Ocean Station PAPA (Station P) on R/V Roger Revelle Co-Principal Investigator	2023-07-06	Final no updates expected
Dissolved trace metal (Mn, Fe, Co, Ni, Cu, Zn, Cd, Pb) and labile particulate elemental (P, V, Mn, Fe, Co, Ni, Cu, Zn, Cd, Pb) concentrations from shipboard incubation experiments conducted on the 2018 EXPORTS cruise (RR1813) near Ocean Station PAPA Co-Principal Investigator	2023-06-06	Final no updates expected
Results from nutrient limitation assessments quantifying the level of Si, N, and Fe stress being experienced by phytoplankton in samples collected on EXPORTS cruise DY131 in the North Atlantic during May 2021 Co-Principal Investigator	2023-04-06	Final no updates expected
Depth profiles in the euphotic zone of nitrate, silicate, and phosphate concentrations and profiles of silicic acid uptake rates from EXPORTS cruise DY131 in the North Atlantic during May 2021 Co-Principal Investigator	2023-04-12	Final no updates expected
Dissolved trace metal (Mn, Fe, Co, Ni, Cu, Zn, Cd, Pb) concentrations from surface (towfish) samples collected during the 2018 EXPORTS cruise (RR1813) to the subarctic North Pacific near Ocean Station PAPA (Station P) on R/V Roger Revelle Co-Principal Investigator	2023-06-02	Final no updates expected
32Si and 14C production data (experimental) from EXPORTS cruise RR1813 on R/V Roger Revelle in the Subarctic North Pacific near Station PAPA from August to September 2018 Co-Principal Investigator	2020-01-06	Final no updates expected
32Si data from EXPORTS cruise RR1813 on R/V Roger Revelle in the Subarctic North Pacific near Station PAPA from August to September 2018 Co-Principal Investigator	2020-01-03	Final no updates expected

Project: Collaborative Research: Dynamics of dissolved organic phosphorus production, composition and bioavailability along a natural marine phosphate gradient

Dataset	Version Date	Current State
Alkaline phosphatase activities for in situ and incubation samples from RV/Atlantic Explorer cruise AE1812 cruise transect from Bermuda to Rhode Island in May 2018. Co-Principal Investigator	2018-07-16	Final no updates expected

Project: Northeast U.S. Shelf Long Term Ecological Research site

Dataset	Version Date	Current State
Pseudo-nitzschia spp. presence-absence and environmental data in Narragansett Bay in Rhode Island, USA and the Northeast U.S. Shelf (NES-LTER transect) from 2018-2023 Principal Investigator	2024-10-14	Final no updates expected
Amplicon sequence variants (ASVs) and taxonomy of Pseudo-nitzschia spp. from Narragansett Bay in Rhode Island, USA and the Northeast U.S. Shelf (NES-LTER transect) from 2018-2023 Principal Investigator	2024-10-11	Final no updates expected

Project: Collaborative Research: Investigating Iron-binding Ligands in Southern Ocean Diatom Communities: The Role of Diatom-Bacteria Associations

Dataset	Version Date	Current State
Dissolved trace metal concentrations for Incubation 3, initiated September 27th, 2016 on RVIB Nathaniel B. Palmer cruise NBP16-08 in the Southern Ocean Co-Principal Investigator	2019-11-15	Final no updates expected
Dissolved trace metal concentrations for Incubation 2, initiated September 24th, 2016 on RVIB Nathaniel B. Palmer cruise NBP16-08 in the Southern Ocean Co-Principal Investigator	2019-11-20	Final no updates expected
Dissolved trace metal concentrations from depth profiles during RVIB Nathaniel B. Palmer cruise NBP16-08 in the Southern Ocean from 2016-09-11 to 2016-10-10 Co-Principal Investigator	2019-11-15	Final no updates expected
Dissolved trace metal concentrations for Incubation 1, initiated September 11th, 2016 on RVIB Nathaniel B. Palmer cruise NBP16-08 in the Southern Ocean Co-Principal Investigator	2019-11-20	Final no updates expected
Dissolved macronutrient concentrations from incubation experiments performed on RVIB Nathaniel B. Palmer cruise NBP 16-08 from September to October 2016 Co-Principal Investigator	2018-07-31	Final no updates expected
Dissolved macronutrient concentrations from depth profiles from RVIB Nathaniel B. Palmer cruise NBP1608 in the Southern Ocean from September to October 2016 Co-Principal Investigator	2018-07-30	Final no updates expected
Underway dissolved macronutrient concentrations collected on RVIB Nathaniel B. Palmer cruise NBP 16-08 from September to October 2016 Co-Principal Investigator	2018-07-26	Final no updates expected
Chlorophyll and phaeopigment concentrations from incubation experiments performed with amended Southern Drake Passage on RVIB Nathaniel B. Palmer cruise NBP 16-08 from September to October 2016 Co-Principal Investigator	2018-07-25	Final no updates expected
Chlorophyll and phaeopigment concentrations from near-surface profiles collected using the conventional CTD in the Southern Drake Passage and Antarctic Peninsular region on RVIB Nathaniel B. Palmer cruise NBP 16-08 from September to October 2016 Co-Principal Investigator	2018-07-20	Final no updates expected

Project: Collaborative Research: Defining the biogeochemical drivers of diatom physiological ecology in the North Atlantic

Dataset	Version Date	Current State
Chlorophyll a concentrations measured along the cruise track of AE1812 which transected from the Sargasso Sea to Coastal Rhode Island during May 2018. Co-Principal Investigator	2020-08-14	Final no updates expected
Chlorophyll a concentrations from addition incubation experiments performed aboard AE1812 while transecting from the Sargasso Sea to Coastal Rhode Island in May 2018. Co-Principal Investigator	2020-08-14	Final no updates expected
Chlorophyll a concentrations along the cruise track of AR16 from May 2017 in the Sargasso Sea Co-Principal Investigator	2019-08-21	Data not available
Chlorophyll a concentrations from addition incubation experiments performed on AR16 from May 2017 in the Sargasso Sea Co-Principal Investigator	2019-08-21	Data not available
Alkaline phosphatase activities for in situ and incubation samples from RV/Atlantic Explorer cruise AE1812 cruise transect from Bermuda to Rhode Island in May 2018. Co-Principal Investigator	2018-07-16	Final no updates expected

Project: Genomic and Transcriptomic Comparison of Iron and Light Physiology in Coastal and Oceanic Diatoms

Dataset	Version Date	Current State
ENA accessions for transcriptomes of T. oceanica and T. weissflogii grown in varied Fe and light (GeTFeHvCOdia project) Principal Investigator	2016-01-28	Final no updates expected
NCBI and iMicrobe accessions for transcriptomes of T. oceanica and T. weissflogii grown in varied Fe and light (GeTFeHvCOdia project) Principal Investigator	2016-01-28	Final no updates expected
Culture conditions for T. oceanica and T. weissflogii grown in varied Fe and light collected during 2015 (GeTFeHvCOdia project) Principal Investigator	2016-02-02	Final no updates expected

Status message

Database

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Bethany D. Jenkins

Activities reported for Bethany D. Jenkins: